| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594861
Identifier: 83594861
GI number: 83594861
Start: 4063648
End: 4064205
Strand: Reverse
Name: 83594861
Synonym: Rru_A3532
Alternate gene names: NA
Gene position: 4064205-4063648 (Counterclockwise)
Preceding gene: 83594862
Following gene: 83594860
Centisome position: 93.37
GC content: 67.74
Gene sequence:
>558_bases ATGGATGCTGATGATCTGCCCGACGACTCCGCCCCCCTTGCCTCCCCCCCCTCCGTCGCCGAGGGGGTTCATGATGGCGT CGATGAGACCCATCCCCATGGCCGGACCTTTCTGGTGGTGGTCGATGACAGCGAGGAAATGAACGCCGCCCTGGCCTATG CCTGCCTGCGGGCGCGCGTCACCGGCGGCCGGGTCGCCCTGCTCCGCGTCATCGAACCCGCCGAGTTCCAGCACTTCGCC TTTATCGATTCCATCATGGAGCACGAGGCCCGCGAACGGGCCGAACAGCTGCTCCAGCGCATGGCCGCCGAGGTCAACCG CCGTTCGGGCCAACTGCCGATGCTCTATGTGCGCGAGGGCAAGGCGGTCGACGAACTGCTGTCGTTGATCGACGAAGAGC CGGGGTTGTCGATCCTGGTGCTGGCGGCGGGCAAGGGCAAGGACGGGCCGGGGCCGCTGGTCACCGCCTGCGGCAGTGGC CTGATGGCGCGGCTGCGCGTGCCCGTCACCATCGTGCCGGCCGGTTTGACCCCCGAGGATATTGAACGCCTCGCTTGA
Upstream 100 bases:
>100_bases GGCGGCGGTGATCGTCGCCATCGCCGCCGGCTGGCTGGCTGGCGTCGCCTTTCGCAAGGCCTGATCGGCCCGCCCCCAGA GCTTTGATCGGAACCACCCT
Downstream 100 bases:
>100_bases CAGCCCGCCTGCTTCGGCCCAATTCGGAGGCGGGAGCGGCCCGCCGGCGCGGTCCCTTTCCCCCGGCCTTCCTCCTTTGT CGTCTTTCTAGAAAGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; UspA Protein; Uspa Domain-Containing Protein
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MDADDLPDDSAPLASPPSVAEGVHDGVDETHPHGRTFLVVVDDSEEMNAALAYACLRARVTGGRVALLRVIEPAEFQHFA FIDSIMEHEARERAEQLLQRMAAEVNRRSGQLPMLYVREGKAVDELLSLIDEEPGLSILVLAAGKGKDGPGPLVTACGSG LMARLRVPVTIVPAGLTPEDIERLA
Sequences:
>Translated_185_residues MDADDLPDDSAPLASPPSVAEGVHDGVDETHPHGRTFLVVVDDSEEMNAALAYACLRARVTGGRVALLRVIEPAEFQHFA FIDSIMEHEARERAEQLLQRMAAEVNRRSGQLPMLYVREGKAVDELLSLIDEEPGLSILVLAAGKGKDGPGPLVTACGSG LMARLRVPVTIVPAGLTPEDIERLA >Mature_185_residues MDADDLPDDSAPLASPPSVAEGVHDGVDETHPHGRTFLVVVDDSEEMNAALAYACLRARVTGGRVALLRVIEPAEFQHFA FIDSIMEHEARERAEQLLQRMAAEVNRRSGQLPMLYVREGKAVDELLSLIDEEPGLSILVLAAGKGKDGPGPLVTACGSG LMARLRVPVTIVPAGLTPEDIERLA
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19841; Mature: 19841
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDADDLPDDSAPLASPPSVAEGVHDGVDETHPHGRTFLVVVDDSEEMNAALAYACLRARV CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHC TGGRVALLRVIEPAEFQHFAFIDSIMEHEARERAEQLLQRMAAEVNRRSGQLPMLYVREG CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC KAVDELLSLIDEEPGLSILVLAAGKGKDGPGPLVTACGSGLMARLRVPVTIVPAGLTPED CCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHCCCCEEEEECCCCHHH IERLA HHHCC >Mature Secondary Structure MDADDLPDDSAPLASPPSVAEGVHDGVDETHPHGRTFLVVVDDSEEMNAALAYACLRARV CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHC TGGRVALLRVIEPAEFQHFAFIDSIMEHEARERAEQLLQRMAAEVNRRSGQLPMLYVREG CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC KAVDELLSLIDEEPGLSILVLAAGKGKDGPGPLVTACGSGLMARLRVPVTIVPAGLTPED CCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHCCCCEEEEECCCCHHH IERLA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA