Click here to switch to the map view.

The map label for this gene is yhgI [C]

Identifier: 83594860

GI number: 83594860

Start: 4062993

End: 4063544

Strand: Reverse

Name: yhgI [C]

Synonym: Rru_A3531

Alternate gene names: 83594860

Gene position: 4063544-4062993 (Counterclockwise)

Preceding gene: 83594861

Following gene: 83594858

Centisome position: 93.35

GC content: 66.85

Gene sequence:

>552_bases
ATGTTTATTCAGACCGAACGCACTCCCAATCCCGCCAGCCTCAAGTTCCTGCCCGGCAAGGCGGTTCTACCCGGTGGCGG
GCGCGATTTCGCCGATGTCGGCGCGGCCGGGCCCTCGCCGCTCGCCCGTCGGCTGTTTGCCATCGACGGGGTGACCGGCA
TCTACCTTGGCGCCGATTTCATCACCGTCAGCAAGGCCGAGGCCGAGGATTGGCAGGTGATCAAGCCGCTGGTCCTGGGC
GCGATCATGGAGCATTTCACCTCGGGCGAGCCGGTGCTGATCGCCGGCACCGCCGCCGAGAGCGCGGGAAGCGCCGAGGA
CGACGAGGTCGTCCGCCAGATCCGCGATCTGCTGGAAACCCGGGTGCGCCCGGCGGTGGCCCAGGATGGCGGCGATATCG
TGTTCGATCGCTTCCAGGATGGCGTCGTCTATCTGCACCTGCGCGGCTCGTGCTCGGGCTGCCCCAGTTCCACCGCCACC
CTCAAGCACGGCATCGAAAACATGCTGCGCCACTACATTCCCGAGGTCGAGGCGGTCGAAGCGGTCCTCTGA

Upstream 100 bases:

>100_bases
CCCGCCTGCTTCGGCCCAATTCGGAGGCGGGAGCGGCCCGCCGGCGCGGTCCCTTTCCCCCGGCCTTCCTCCTTTGTCGT
CTTTCTAGAAAGCGCCCCTG

Downstream 100 bases:

>100_bases
GGGCTTTCCGACCCGCCATCGCCCGTCTCCTTGCCGGCCGGTGCGTCGCGTGCCGTCGGCGGGGAGCGGGCGAATAGATC
GGGGGGATCGGCCTCGCTGC

Product: nitrogen-fixing NifU-like

Products: NA

Alternate protein names: NifU Domain Protein; Nitrogen-Fixing NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU-Like; Nitrogen Fixation Protein; NifU-Like Domain Protein; NifU Related Protein; NifU-Like Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Scaffold Protein Nfu/Nifu; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing Protein NifU; Nitrogen-Fixing NifU Domain-Containing Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; NifU-Like Nitrogen Fixation Protein; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MFIQTERTPNPASLKFLPGKAVLPGGGRDFADVGAAGPSPLARRLFAIDGVTGIYLGADFITVSKAEAEDWQVIKPLVLG
AIMEHFTSGEPVLIAGTAAESAGSAEDDEVVRQIRDLLETRVRPAVAQDGGDIVFDRFQDGVVYLHLRGSCSGCPSSTAT
LKHGIENMLRHYIPEVEAVEAVL

Sequences:

>Translated_183_residues
MFIQTERTPNPASLKFLPGKAVLPGGGRDFADVGAAGPSPLARRLFAIDGVTGIYLGADFITVSKAEAEDWQVIKPLVLG
AIMEHFTSGEPVLIAGTAAESAGSAEDDEVVRQIRDLLETRVRPAVAQDGGDIVFDRFQDGVVYLHLRGSCSGCPSSTAT
LKHGIENMLRHYIPEVEAVEAVL
>Mature_183_residues
MFIQTERTPNPASLKFLPGKAVLPGGGRDFADVGAAGPSPLARRLFAIDGVTGIYLGADFITVSKAEAEDWQVIKPLVLG
AIMEHFTSGEPVLIAGTAAESAGSAEDDEVVRQIRDLLETRVRPAVAQDGGDIVFDRFQDGVVYLHLRGSCSGCPSSTAT
LKHGIENMLRHYIPEVEAVEAVL

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593025, Length=184, Percent_Identity=55.4347826086957, Blast_Score=214, Evalue=3e-56,
Organism=Homo sapiens, GI50593021, Length=184, Percent_Identity=55.4347826086957, Blast_Score=214, Evalue=4e-56,
Organism=Homo sapiens, GI50593023, Length=101, Percent_Identity=56.4356435643564, Blast_Score=127, Evalue=7e-30,
Organism=Homo sapiens, GI50593019, Length=101, Percent_Identity=56.4356435643564, Blast_Score=127, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI17541876, Length=182, Percent_Identity=50.5494505494505, Blast_Score=192, Evalue=7e-50,
Organism=Saccharomyces cerevisiae, GI6322811, Length=207, Percent_Identity=34.7826086956522, Blast_Score=120, Evalue=2e-28,
Organism=Drosophila melanogaster, GI45551492, Length=185, Percent_Identity=54.5945945945946, Blast_Score=201, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24643765, Length=185, Percent_Identity=54.5945945945946, Blast_Score=201, Evalue=2e-52,
Organism=Drosophila melanogaster, GI45556188, Length=185, Percent_Identity=54.5945945945946, Blast_Score=201, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19473; Mature: 19473

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQTERTPNPASLKFLPGKAVLPGGGRDFADVGAAGPSPLARRLFAIDGVTGIYLGADF
CCCCCCCCCCCCCEEECCCCEECCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEECCCE
ITVSKAEAEDWQVIKPLVLGAIMEHFTSGEPVLIAGTAAESAGSAEDDEVVRQIRDLLET
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
RVRPAVAQDGGDIVFDRFQDGVVYLHLRGSCSGCPSSTATLKHGIENMLRHYIPEVEAVE
HHCCHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
AVL
HCC
>Mature Secondary Structure
MFIQTERTPNPASLKFLPGKAVLPGGGRDFADVGAAGPSPLARRLFAIDGVTGIYLGADF
CCCCCCCCCCCCCEEECCCCEECCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEECCCE
ITVSKAEAEDWQVIKPLVLGAIMEHFTSGEPVLIAGTAAESAGSAEDDEVVRQIRDLLET
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
RVRPAVAQDGGDIVFDRFQDGVVYLHLRGSCSGCPSSTATLKHGIENMLRHYIPEVEAVE
HHCCHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
AVL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA