| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594862
Identifier: 83594862
GI number: 83594862
Start: 4064242
End: 4065228
Strand: Reverse
Name: 83594862
Synonym: Rru_A3533
Alternate gene names: NA
Gene position: 4065228-4064242 (Counterclockwise)
Preceding gene: 83594863
Following gene: 83594861
Centisome position: 93.39
GC content: 66.87
Gene sequence:
>987_bases GTGGCTGATCCCGCCTCGCGGTGGCGATCGGGCGATCGCGGCTCGCGGTGGGGACCCGGCAATCGCGGGCTTGCGATTTG GCGCGCGGCCCTGTTCACTGGGGGTGATCGGGGCCGCCGTCAGGGTCGCCCGTCTCCCGGCCTGGAAGGTTCGATGCCTA ACCCCGTGCTGGCCTTGTTTCCCGTGCCCTCTCCCGGCCGTCGCCGCCTTGCCCGCCGCGCCGCCGGGGTCTGCGCCCTG GCGACTTTTCTGCTGGGGGGGCTTGCCGCCCAGGCCCAGGTGCAGCCGCTGGTCGCCGATTTGTCCAAGCATCTGGTGGC GATCACCACCGCCTTTTCGGGCACCGATGTTTTGCTGTTCGGCGCCACCGATGGCCCGGGCGACGTGGTGATGGTGGTGC GCGGCCCGCGCGATAGCCATGTGGTCCGCCGCAAGGATAAGCTGGGCATCATCTGGGCCAATCAGGAAAGCGTCGTCTTC GACGAGGTGCCGACCTTTTATCGGGTGGCCTCGAACCGGCCCTTGGAAAGCTTCACCACCCCGGCGGTGTTGTCGCGCCA TCAGATCGGCACCGCCTATCTGGCCTTGCCGGTGCGCGACGCCGATTTCTATGACGCGCCGACGCGGGCGGTGTTCCGCG ACGCCTTTTTGCGGCTGAAGCGCCAGCAGGGGCTGTATGGCGGCATGGGCGAGGACTCGGCCGCTCCGGGCGACGATCGC ATCGCCCTTCTCGACAACCGGTTGTTCCGGGCCAATCTATATTTCCCGGCCAATGTCCCGGTTGGCAGCTATATCGTTGA AGTCTATCTGTTTCGTGATGGCGAGGTGGTCAGCGCCGAAATCACGCCGCTGGTCATCAGCAAGATCGGCATCGGCGCCG AGATCTTCGATTTCGCCAAGCATCGGGCGCTGGCCTATGGTGTGGCGGCGGTGATCGTCGCCATCGCCGCCGGCTGGCTG GCTGGCGTCGCCTTTCGCAAGGCCTGA
Upstream 100 bases:
>100_bases GGCGCGGCCGATGCCCTGATCGTGCCCAACCATTTGGCCAGCCAGGGCTTCTTGCTGGCGCGCGCCCAGGCCGACATCGA CGCGGTGATCGCCGCCCTGG
Downstream 100 bases:
>100_bases TCGGCCCGCCCCCAGAGCTTTGATCGGAACCACCCTATGGATGCTGATGATCTGCCCGACGACTCCGCCCCCCTTGCCTC CCCCCCCTCCGTCGCCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MADPASRWRSGDRGSRWGPGNRGLAIWRAALFTGGDRGRRQGRPSPGLEGSMPNPVLALFPVPSPGRRRLARRAAGVCAL ATFLLGGLAAQAQVQPLVADLSKHLVAITTAFSGTDVLLFGATDGPGDVVMVVRGPRDSHVVRRKDKLGIIWANQESVVF DEVPTFYRVASNRPLESFTTPAVLSRHQIGTAYLALPVRDADFYDAPTRAVFRDAFLRLKRQQGLYGGMGEDSAAPGDDR IALLDNRLFRANLYFPANVPVGSYIVEVYLFRDGEVVSAEITPLVISKIGIGAEIFDFAKHRALAYGVAAVIVAIAAGWL AGVAFRKA
Sequences:
>Translated_328_residues MADPASRWRSGDRGSRWGPGNRGLAIWRAALFTGGDRGRRQGRPSPGLEGSMPNPVLALFPVPSPGRRRLARRAAGVCAL ATFLLGGLAAQAQVQPLVADLSKHLVAITTAFSGTDVLLFGATDGPGDVVMVVRGPRDSHVVRRKDKLGIIWANQESVVF DEVPTFYRVASNRPLESFTTPAVLSRHQIGTAYLALPVRDADFYDAPTRAVFRDAFLRLKRQQGLYGGMGEDSAAPGDDR IALLDNRLFRANLYFPANVPVGSYIVEVYLFRDGEVVSAEITPLVISKIGIGAEIFDFAKHRALAYGVAAVIVAIAAGWL AGVAFRKA >Mature_327_residues ADPASRWRSGDRGSRWGPGNRGLAIWRAALFTGGDRGRRQGRPSPGLEGSMPNPVLALFPVPSPGRRRLARRAAGVCALA TFLLGGLAAQAQVQPLVADLSKHLVAITTAFSGTDVLLFGATDGPGDVVMVVRGPRDSHVVRRKDKLGIIWANQESVVFD EVPTFYRVASNRPLESFTTPAVLSRHQIGTAYLALPVRDADFYDAPTRAVFRDAFLRLKRQQGLYGGMGEDSAAPGDDRI ALLDNRLFRANLYFPANVPVGSYIVEVYLFRDGEVVSAEITPLVISKIGIGAEIFDFAKHRALAYGVAAVIVAIAAGWLA GVAFRKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35309; Mature: 35178
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPASRWRSGDRGSRWGPGNRGLAIWRAALFTGGDRGRRQGRPSPGLEGSMPNPVLALF CCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCEEEEE PVPSPGRRRLARRAAGVCALATFLLGGLAAQAQVQPLVADLSKHLVAITTAFSGTDVLLF ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEE GATDGPGDVVMVVRGPRDSHVVRRKDKLGIIWANQESVVFDEVPTFYRVASNRPLESFTT ECCCCCCCEEEEEECCCCCCHHHHCCCEEEEEECCCCEEHHCCCHHHHHHCCCCHHHCCC PAVLSRHQIGTAYLALPVRDADFYDAPTRAVFRDAFLRLKRQQGLYGGMGEDSAAPGDDR HHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE IALLDNRLFRANLYFPANVPVGSYIVEVYLFRDGEVVSAEITPLVISKIGIGAEIFDFAK EEEECCCEEEEEEEECCCCCHHCEEEEEEEEECCCEEEEECCHHHHHHHCCCHHHHHHHH HRALAYGVAAVIVAIAAGWLAGVAFRKA HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADPASRWRSGDRGSRWGPGNRGLAIWRAALFTGGDRGRRQGRPSPGLEGSMPNPVLALF CCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCEEEEE PVPSPGRRRLARRAAGVCALATFLLGGLAAQAQVQPLVADLSKHLVAITTAFSGTDVLLF ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEE GATDGPGDVVMVVRGPRDSHVVRRKDKLGIIWANQESVVFDEVPTFYRVASNRPLESFTT ECCCCCCCEEEEEECCCCCCHHHHCCCEEEEEECCCCEEHHCCCHHHHHHCCCCHHHCCC PAVLSRHQIGTAYLALPVRDADFYDAPTRAVFRDAFLRLKRQQGLYGGMGEDSAAPGDDR HHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE IALLDNRLFRANLYFPANVPVGSYIVEVYLFRDGEVVSAEITPLVISKIGIGAEIFDFAK EEEECCCEEEEEEEECCCCCHHCEEEEEEEEECCCEEEEECCHHHHHHHCCCHHHHHHHH HRALAYGVAAVIVAIAAGWLAGVAFRKA HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA