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The map label for this gene is ybfB [H]

Identifier: 83594846

GI number: 83594846

Start: 4049187

End: 4050473

Strand: Reverse

Name: ybfB [H]

Synonym: Rru_A3517

Alternate gene names: 83594846

Gene position: 4050473-4049187 (Counterclockwise)

Preceding gene: 83594847

Following gene: 83594842

Centisome position: 93.05

GC content: 67.99

Gene sequence:

>1287_bases
ATGCCGACCAAACGCCCGCCCGCCGGTCTGCACTACGCCTGGATCGTCGCCGCCGTCACCTTTCTCGTCTTGCTAGTCGG
CGCGGGGATCCGGGCGACGCCGGGCATCCTGATCGTGCCGCTCGAGCGGGACTTCGGCTGGTCGACGGCGACGATCAGCA
CCGCCATCGCCGTCAATATCTTCCTGTTTGGCATGATCGGCCCCTTCGCCGTGGCGGTGATGGAGCGCTTCGGTCTGCGT
CGCAGCGTGGTTGGCGCCCTGCTGGTTCTGGCCGGCGGGGTGGCGCTGACGACGCTGATGAGCAAGCCCTGGCATATGGT
CGTGTTGTGGGGGCTGGTGGTCGGATCGGGAAGCGGGATGATCGCCCTGGTGCTGGGCGCTACGGTGGCCGGACGCTGGT
TTGGCAAGCGGCGCGGTTTGGTGCTTGGCCTGCTGACCGCGTCCAGCGCCACCGGCCAGCTTATCTTCCTGCCCATTCTC
GCCCATATCAGCGTCGATCAGGGCTGGCGGACGATGGCGCTGGTGGTGGCCGGCGCCGCCCTGCTGTTGGTGCCGTTGGC
CGGGCTTTTGCTGCGCGATCGGCCCGGCGATCTGGGTCTGCCCCGCTACGGCGAAACCACCCTGGAGCCGCCGCCCGGCG
TGCCGATCAATCCGCTGCGCCGGGCGACCAGCGCCCTGGCCTTGGGCTTGCGCTCGCGGGATTTCTGGCTGCTCTCAGGC
ACCTTCTTTATTTGCGGCGCCTCGACCAATGGTCTGGTCGGCACCCATATGATCGCCGCCTGTTTTGATCAGGGCATTCC
CGAGGTCGCCGCCGCCGGCCTGCTCGCCCTGATGGGGCTCTGCGATCTGGTGGGCACCACCGCCTCGGGCTGGCTGACCG
ATCGCTATGACAGCCGCGTGCTGCTGATCTGGTATTATGGCCTGCGCGGGGTGTCGTTGCTGTTCCTGCCCTATGCCTTC
GACCTGGATGTCTATGGCCTGTCGCTGTTCGCGGTGTTCTACGGCCTGGATTGGATCGCCACCGTTCCGCCCACCGTGCG
GCTGGCCGGACAGGCCTTCGGCGAAGGCAACGCCGCCTTGATGTTCGGCTGGATCGCCGCCGCCCACCAGATCGGCGCCG
CCACCGCCGCCTGGGCGGCCGGCGCCCTGCGCACGGCGAGCGGCGTCTATGACGGCGCCTTCTTCTCGGCCGGTCTGCTC
TGTCTGATTGCCGTGGTGCTGGTCGTCTTCATCGGTCGCGGACCGCGCCAGACGCCGATCGGCCGGGTGGCGATGGAAAA
ACCCTAA

Upstream 100 bases:

>100_bases
CGTCTCGCCCATGCCCATCTGCGCGCCTATGAAGCGCGCCGCGCCCGCCAATCCTGATCCCCCCCTATGCCCAGCCAAAG
CGGCCGGGCGGAGAGCGCCG

Downstream 100 bases:

>100_bases
GCCGACAAGGTGCGGGTCAGCAGAGTTCGTCTTCCAGGCGACGCAGGATGGTCAGCCCCTCCTCGTCGTCATTGTCTTCG
AACAACTCGTCGATATAGCC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MPTKRPPAGLHYAWIVAAVTFLVLLVGAGIRATPGILIVPLERDFGWSTATISTAIAVNIFLFGMIGPFAVAVMERFGLR
RSVVGALLVLAGGVALTTLMSKPWHMVVLWGLVVGSGSGMIALVLGATVAGRWFGKRRGLVLGLLTASSATGQLIFLPIL
AHISVDQGWRTMALVVAGAALLLVPLAGLLLRDRPGDLGLPRYGETTLEPPPGVPINPLRRATSALALGLRSRDFWLLSG
TFFICGASTNGLVGTHMIAACFDQGIPEVAAAGLLALMGLCDLVGTTASGWLTDRYDSRVLLIWYYGLRGVSLLFLPYAF
DLDVYGLSLFAVFYGLDWIATVPPTVRLAGQAFGEGNAALMFGWIAAAHQIGAATAAWAAGALRTASGVYDGAFFSAGLL
CLIAVVLVVFIGRGPRQTPIGRVAMEKP

Sequences:

>Translated_428_residues
MPTKRPPAGLHYAWIVAAVTFLVLLVGAGIRATPGILIVPLERDFGWSTATISTAIAVNIFLFGMIGPFAVAVMERFGLR
RSVVGALLVLAGGVALTTLMSKPWHMVVLWGLVVGSGSGMIALVLGATVAGRWFGKRRGLVLGLLTASSATGQLIFLPIL
AHISVDQGWRTMALVVAGAALLLVPLAGLLLRDRPGDLGLPRYGETTLEPPPGVPINPLRRATSALALGLRSRDFWLLSG
TFFICGASTNGLVGTHMIAACFDQGIPEVAAAGLLALMGLCDLVGTTASGWLTDRYDSRVLLIWYYGLRGVSLLFLPYAF
DLDVYGLSLFAVFYGLDWIATVPPTVRLAGQAFGEGNAALMFGWIAAAHQIGAATAAWAAGALRTASGVYDGAFFSAGLL
CLIAVVLVVFIGRGPRQTPIGRVAMEKP
>Mature_427_residues
PTKRPPAGLHYAWIVAAVTFLVLLVGAGIRATPGILIVPLERDFGWSTATISTAIAVNIFLFGMIGPFAVAVMERFGLRR
SVVGALLVLAGGVALTTLMSKPWHMVVLWGLVVGSGSGMIALVLGATVAGRWFGKRRGLVLGLLTASSATGQLIFLPILA
HISVDQGWRTMALVVAGAALLLVPLAGLLLRDRPGDLGLPRYGETTLEPPPGVPINPLRRATSALALGLRSRDFWLLSGT
FFICGASTNGLVGTHMIAACFDQGIPEVAAAGLLALMGLCDLVGTTASGWLTDRYDSRVLLIWYYGLRGVSLLFLPYAFD
LDVYGLSLFAVFYGLDWIATVPPTVRLAGQAFGEGNAALMFGWIAAAHQIGAATAAWAAGALRTASGVYDGAFFSAGLLC
LIAVVLVVFIGRGPRQTPIGRVAMEKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI291621700, Length=450, Percent_Identity=21.7777777777778, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI292781289, Length=385, Percent_Identity=24.9350649350649, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI40789261, Length=385, Percent_Identity=24.9350649350649, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI41327156, Length=209, Percent_Identity=25.3588516746411, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI42475555, Length=408, Percent_Identity=26.9607843137255, Blast_Score=66, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17550316, Length=169, Percent_Identity=27.810650887574, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44941; Mature: 44810

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTKRPPAGLHYAWIVAAVTFLVLLVGAGIRATPGILIVPLERDFGWSTATISTAIAVNI
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
FLFGMIGPFAVAVMERFGLRRSVVGALLVLAGGVALTTLMSKPWHMVVLWGLVVGSGSGM
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEHHHCCCCCE
IALVLGATVAGRWFGKRRGLVLGLLTASSATGQLIFLPILAHISVDQGWRTMALVVAGAA
EEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHH
LLLVPLAGLLLRDRPGDLGLPRYGETTLEPPPGVPINPLRRATSALALGLRSRDFWLLSG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
TFFICGASTNGLVGTHMIAACFDQGIPEVAAAGLLALMGLCDLVGTTASGWLTDRYDSRV
EEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEE
LLIWYYGLRGVSLLFLPYAFDLDVYGLSLFAVFYGLDWIATVPPTVRLAGQAFGEGNAAL
EEEEEECCCCCEEEEEEEHCCCHHHHHHHHHHHHCCHHHCCCCCHHEECCHHCCCCCCEE
MFGWIAAAHQIGAATAAWAAGALRTASGVYDGAFFSAGLLCLIAVVLVVFIGRGPRQTPI
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GRVAMEKP
CCCCCCCC
>Mature Secondary Structure 
PTKRPPAGLHYAWIVAAVTFLVLLVGAGIRATPGILIVPLERDFGWSTATISTAIAVNI
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
FLFGMIGPFAVAVMERFGLRRSVVGALLVLAGGVALTTLMSKPWHMVVLWGLVVGSGSGM
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEHHHCCCCCE
IALVLGATVAGRWFGKRRGLVLGLLTASSATGQLIFLPILAHISVDQGWRTMALVVAGAA
EEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHH
LLLVPLAGLLLRDRPGDLGLPRYGETTLEPPPGVPINPLRRATSALALGLRSRDFWLLSG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
TFFICGASTNGLVGTHMIAACFDQGIPEVAAAGLLALMGLCDLVGTTASGWLTDRYDSRV
EEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEE
LLIWYYGLRGVSLLFLPYAFDLDVYGLSLFAVFYGLDWIATVPPTVRLAGQAFGEGNAAL
EEEEEECCCCCEEEEEEEHCCCHHHHHHHHHHHHCCHHHCCCCCHHEECCHHCCCCCCEE
MFGWIAAAHQIGAATAAWAAGALRTASGVYDGAFFSAGLLCLIAVVLVVFIGRGPRQTPI
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GRVAMEKP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]