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The map label for this gene is tse [H]

Identifier: 83594842

GI number: 83594842

Start: 4043340

End: 4045097

Strand: Reverse

Name: tse [H]

Synonym: Rru_A3513

Alternate gene names: 83594842

Gene position: 4045097-4043340 (Counterclockwise)

Preceding gene: 83594846

Following gene: 83594839

Centisome position: 92.93

GC content: 70.25

Gene sequence:

>1758_bases
GTGGGGTCGGGGCGATCAGTCCAGCGGGGCGATCGCCTGGGGGAGGAGACTCCCGGAGCCGGCGAAAAGGGCACGATCAT
GTTGCGCGATATTTCCATCCGGGCCCGGTTGTTTGGCGTTACCGGGGCGCTGCTGCTTTTGCTGCTTGGGGTCGGCGGGC
TGGGCCTGTGGGGGATGGCAAGCGGTCAAGGCGCGCTTGATGACATCCACGAAAACCGCGTGATCCCGCTGGCTGAGCTT
AAGCAGCTTTCCGATCTTTATGCCCGCGACGTCGTTGACAACACCCATCGGATCCTTGGCGGCACGGTGTCCTATGCCGA
AGGGATCGCCCGGCTTGACGGCGCCCTGGCCGAGGCCGGGCGGCTTTGGCGAGGCTATCAGGCCAAGCCGCAGGCACTGG
GCGAACGCGAGGCGAGCGAGCGGCTGACGCCACTGCTGGCCGAAGCCGACGCGGCGGCGGCCAAGCTGCGCGGCCTTCTG
CAAAAGAAGGACAAGATTTCGCTGCTCGGCTTTGCCAACCGCGAGCTGCCCAAGGCGATCGATCCGGTGACCGAGGGCCT
GCGCGCCCTGATCTCGCTTCAGCTTGATTTGGCCCAAAGCGACTATGCCGAGAGCGCCGTCCGCCAGAAGACCACCACCC
TGGCGATGCTGGCCCTGATCGCCCTCGCCGTCGCCGTCGGCGCGGTGCTCAGCCTTGCCGTGCTGCGCTCGATCACCCGG
CCGCTCGGCGCCCTCAACGCCGCCGTCGCCCGCTTGTCGGCCGGCGAGACGGCGACGCCGGTGCCCGGGACCGAGGCGCG
CACCGAAATCGCCCCTTTGGCCGGGGCGATCGAGCAGTGGCGGACCACCCTGGTCGAGGAAAGCCGGCGGCGCGCCGCCG
AAGCGCGCGAGCGTCAGGCCCGCGACGCCCGTCAGCAGCGGGTGATGGCGGCGACGGCCCGCTTCGAGGACCGGGTGGCC
GGTCTGGTCACCGCCATGGCCGAGGGGGTCAGCGGTCTGCATCGGGCGGCTGATACCCTGGGGGCGACCGCCGAGCAGAC
CCGGGTCCGCGCCGCCACGGTGTCGGGGGCGACGGCGACCACCTCGGAAAATGTCGAAACCGTCTCGGCCGCGACCAGCC
AGTTGACCGCCTCGATCAGCGAAATCGCCCGGCAGGTTGAAACCTCAAGCGAAAGCGCCCGCGGCGCCGTGCGTCAGGCC
GAGCAGACCAATCAGCGGGTGAAGACCCTTACCGAGGCGGCGGGGCGGATCGGCGACGTCGTCGGGCTGATTACCGATAT
CGCCAGCCAGACCAATCTTCTGGCGCTCAACGCCACCATCGAAAGCGCGCGCGCCGGCGAGGCCGGCAAGGGCTTCGCCG
TGGTCGCCGGCGAGGTGAAAACCCTGGCCGGACAAACGACGCGGGCGACCGGCGACATCGCCGCCCATATCGCCACCGTC
CAGGCCGAAACCCGCGAGGCGGTCGACGCCCTCGCCGGCATTGGTCAAGCCATTACCCGGGTCGAGGATCTGGTCGCCGG
CGTGGCGGCGGCGGTCGCCCAGCAAGATGTCGCCACCCGCGAAATCGCCCGCAGCATCGCCCAGACCGCCGACAGCGCCC
GGGCGGTGTCGCGCACCATCGCCGAAGTCAATGGCGGGGCCGAGGAAACCGGGGCTTTGGCCGGCGCCGTCGCCCGGTCG
GCCACTCGCCTGCAGGCCGATGGCGCCGCCCTGGACGCCGCCGTGCGCGATTTCCTGGGCGAGGTCAAACAGGCCTGA

Upstream 100 bases:

>100_bases
GCAGCCCCCCCGGGCGAGGCAATGTCGGCGTGGGATTTGGGTCCCCTCCCGGCCATCAAGCGCCTTTTTGCGCCTTGTCC
CTCGGGAATTTGGGGGTATC

Downstream 100 bases:

>100_bases
GGCCACCCCGTTTTACGGCCTCCGTCTTACAGGCCGGCGATCGGCAGAGTGCTGGCCTCGGCGACCACCAGCCCGTCGAG
CCACAGCGCCAGGGTGCGGG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MGSGRSVQRGDRLGEETPGAGEKGTIMLRDISIRARLFGVTGALLLLLLGVGGLGLWGMASGQGALDDIHENRVIPLAEL
KQLSDLYARDVVDNTHRILGGTVSYAEGIARLDGALAEAGRLWRGYQAKPQALGEREASERLTPLLAEADAAAAKLRGLL
QKKDKISLLGFANRELPKAIDPVTEGLRALISLQLDLAQSDYAESAVRQKTTTLAMLALIALAVAVGAVLSLAVLRSITR
PLGALNAAVARLSAGETATPVPGTEARTEIAPLAGAIEQWRTTLVEESRRRAAEARERQARDARQQRVMAATARFEDRVA
GLVTAMAEGVSGLHRAADTLGATAEQTRVRAATVSGATATTSENVETVSAATSQLTASISEIARQVETSSESARGAVRQA
EQTNQRVKTLTEAAGRIGDVVGLITDIASQTNLLALNATIESARAGEAGKGFAVVAGEVKTLAGQTTRATGDIAAHIATV
QAETREAVDALAGIGQAITRVEDLVAGVAAAVAQQDVATREIARSIAQTADSARAVSRTIAEVNGGAEETGALAGAVARS
ATRLQADGAALDAAVRDFLGEVKQA

Sequences:

>Translated_585_residues
MGSGRSVQRGDRLGEETPGAGEKGTIMLRDISIRARLFGVTGALLLLLLGVGGLGLWGMASGQGALDDIHENRVIPLAEL
KQLSDLYARDVVDNTHRILGGTVSYAEGIARLDGALAEAGRLWRGYQAKPQALGEREASERLTPLLAEADAAAAKLRGLL
QKKDKISLLGFANRELPKAIDPVTEGLRALISLQLDLAQSDYAESAVRQKTTTLAMLALIALAVAVGAVLSLAVLRSITR
PLGALNAAVARLSAGETATPVPGTEARTEIAPLAGAIEQWRTTLVEESRRRAAEARERQARDARQQRVMAATARFEDRVA
GLVTAMAEGVSGLHRAADTLGATAEQTRVRAATVSGATATTSENVETVSAATSQLTASISEIARQVETSSESARGAVRQA
EQTNQRVKTLTEAAGRIGDVVGLITDIASQTNLLALNATIESARAGEAGKGFAVVAGEVKTLAGQTTRATGDIAAHIATV
QAETREAVDALAGIGQAITRVEDLVAGVAAAVAQQDVATREIARSIAQTADSARAVSRTIAEVNGGAEETGALAGAVARS
ATRLQADGAALDAAVRDFLGEVKQA
>Mature_584_residues
GSGRSVQRGDRLGEETPGAGEKGTIMLRDISIRARLFGVTGALLLLLLGVGGLGLWGMASGQGALDDIHENRVIPLAELK
QLSDLYARDVVDNTHRILGGTVSYAEGIARLDGALAEAGRLWRGYQAKPQALGEREASERLTPLLAEADAAAAKLRGLLQ
KKDKISLLGFANRELPKAIDPVTEGLRALISLQLDLAQSDYAESAVRQKTTTLAMLALIALAVAVGAVLSLAVLRSITRP
LGALNAAVARLSAGETATPVPGTEARTEIAPLAGAIEQWRTTLVEESRRRAAEARERQARDARQQRVMAATARFEDRVAG
LVTAMAEGVSGLHRAADTLGATAEQTRVRAATVSGATATTSENVETVSAATSQLTASISEIARQVETSSESARGAVRQAE
QTNQRVKTLTEAAGRIGDVVGLITDIASQTNLLALNATIESARAGEAGKGFAVVAGEVKTLAGQTTRATGDIAAHIATVQ
AETREAVDALAGIGQAITRVEDLVAGVAAAVAQQDVATREIARSIAQTADSARAVSRTIAEVNGGAEETGALAGAVARSA
TRLQADGAALDAAVRDFLGEVKQA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=266, Percent_Identity=31.203007518797, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788194, Length=355, Percent_Identity=26.7605633802817, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI2367378, Length=540, Percent_Identity=25.7407407407407, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788195, Length=226, Percent_Identity=30.9734513274336, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1787690, Length=221, Percent_Identity=32.1266968325792, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 60559; Mature: 60428

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSGRSVQRGDRLGEETPGAGEKGTIMLRDISIRARLFGVTGALLLLLLGVGGLGLWGMA
CCCCCCCHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SGQGALDDIHENRVIPLAELKQLSDLYARDVVDNTHRILGGTVSYAEGIARLDGALAEAG
CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RLWRGYQAKPQALGEREASERLTPLLAEADAAAAKLRGLLQKKDKISLLGFANRELPKAI
HHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHH
DPVTEGLRALISLQLDLAQSDYAESAVRQKTTTLAMLALIALAVAVGAVLSLAVLRSITR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLGALNAAVARLSAGETATPVPGTEARTEIAPLAGAIEQWRTTLVEESRRRAAEARERQA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDARQQRVMAATARFEDRVAGLVTAMAEGVSGLHRAADTLGATAEQTRVRAATVSGATAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCC
TSENVETVSAATSQLTASISEIARQVETSSESARGAVRQAEQTNQRVKTLTEAAGRIGDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLITDIASQTNLLALNATIESARAGEAGKGFAVVAGEVKTLAGQTTRATGDIAAHIATV
HHHHHHHHCCCCEEEEECHHHHHCCCCCCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHH
QAETREAVDALAGIGQAITRVEDLVAGVAAAVAQQDVATREIARSIAQTADSARAVSRTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVNGGAEETGALAGAVARSATRLQADGAALDAAVRDFLGEVKQA
HHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GSGRSVQRGDRLGEETPGAGEKGTIMLRDISIRARLFGVTGALLLLLLGVGGLGLWGMA
CCCCCCHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SGQGALDDIHENRVIPLAELKQLSDLYARDVVDNTHRILGGTVSYAEGIARLDGALAEAG
CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RLWRGYQAKPQALGEREASERLTPLLAEADAAAAKLRGLLQKKDKISLLGFANRELPKAI
HHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHH
DPVTEGLRALISLQLDLAQSDYAESAVRQKTTTLAMLALIALAVAVGAVLSLAVLRSITR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLGALNAAVARLSAGETATPVPGTEARTEIAPLAGAIEQWRTTLVEESRRRAAEARERQA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDARQQRVMAATARFEDRVAGLVTAMAEGVSGLHRAADTLGATAEQTRVRAATVSGATAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCC
TSENVETVSAATSQLTASISEIARQVETSSESARGAVRQAEQTNQRVKTLTEAAGRIGDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLITDIASQTNLLALNATIESARAGEAGKGFAVVAGEVKTLAGQTTRATGDIAAHIATV
HHHHHHHHCCCCEEEEECHHHHHCCCCCCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHH
QAETREAVDALAGIGQAITRVEDLVAGVAAAVAQQDVATREIARSIAQTADSARAVSRTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVNGGAEETGALAGAVARSATRLQADGAALDAAVRDFLGEVKQA
HHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]