| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594822
Identifier: 83594822
GI number: 83594822
Start: 4021545
End: 4021904
Strand: Direct
Name: 83594822
Synonym: Rru_A3493
Alternate gene names: NA
Gene position: 4021545-4021904 (Clockwise)
Preceding gene: 83594817
Following gene: 83594823
Centisome position: 92.39
GC content: 62.22
Gene sequence:
>360_bases ATGACCATGACCATGCTTGATATGGGGCTTTTGAACGAATTGAAAGAGGACCTCGGCGAGGAGGTCCTTGCCGGCCTGCT CGCCCACTTCATCGGGAATTCCAAGGCCCGCCTCACCCGCCTCGCCGCGGCATTGGAGAGCGGAGCCTTGCGGGAGGCGG GACGCGAAGCCCATTCCCTGAAAGGTATCGCCGCGTCGTTGGGAATGCCCGATCTTGCCGCCTTCGCCGGAGTTATCGAA GAGACTTGCCGTACCGGAGATCTGGACTCCGCCCGGGCACAAGCGCACGGGCTTCCCGAGCTTTTGGAGCGGACGGTCGT CAGCCTGGGGGACCATTACACCTTGCCAAACCGATCCTGA
Upstream 100 bases:
>100_bases CCGCCGCGGAACGCAACTGGCAAGGCGATCTGCAACAAAGCCGGTGATCGGCGCCTGGTCTTTCCCCCTTGTTCCCGCGC AGGGAGGACGCCTCCCAACC
Downstream 100 bases:
>100_bases CCCACAGCCCGGCCCCGCTCCGCAAGGGGCGCGGCCGTGACGGCTTCCCCAGTGGCTGATCCGAGGAACAAGCAGGCATG CCCGGAAGAAAACCCATCGC
Product: Hpt domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTMTMLDMGLLNELKEDLGEEVLAGLLAHFIGNSKARLTRLAAALESGALREAGREAHSLKGIAASLGMPDLAAFAGVIE ETCRTGDLDSARAQAHGLPELLERTVVSLGDHYTLPNRS
Sequences:
>Translated_119_residues MTMTMLDMGLLNELKEDLGEEVLAGLLAHFIGNSKARLTRLAAALESGALREAGREAHSLKGIAASLGMPDLAAFAGVIE ETCRTGDLDSARAQAHGLPELLERTVVSLGDHYTLPNRS >Mature_118_residues TMTMLDMGLLNELKEDLGEEVLAGLLAHFIGNSKARLTRLAAALESGALREAGREAHSLKGIAASLGMPDLAAFAGVIEE TCRTGDLDSARAQAHGLPELLERTVVSLGDHYTLPNRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12613; Mature: 12481
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50894 HPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTMLDMGLLNELKEDLGEEVLAGLLAHFIGNSKARLTRLAAALESGALREAGREAHSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KGIAASLGMPDLAAFAGVIEETCRTGDLDSARAQAHGLPELLERTVVSLGDHYTLPNRS HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TMTMLDMGLLNELKEDLGEEVLAGLLAHFIGNSKARLTRLAAALESGALREAGREAHSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KGIAASLGMPDLAAFAGVIEETCRTGDLDSARAQAHGLPELLERTVVSLGDHYTLPNRS HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA