| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594656
Identifier: 83594656
GI number: 83594656
Start: 3838254
End: 3839444
Strand: Direct
Name: 83594656
Synonym: Rru_A3327
Alternate gene names: NA
Gene position: 3838254-3839444 (Clockwise)
Preceding gene: 83594648
Following gene: 83594658
Centisome position: 88.18
GC content: 73.55
Gene sequence:
>1191_bases ATGAGCCCGGCCGACAGCGGCCCGCGGCGGCCGCCGCGCCCAACGCCACCCACCGAACGGCCCCCGGCGGGACGCGAGGC CGGCCCACGGGGGGCGGGCGCCGCTCGCCCCGCCTCTGGATCGACCCCGCCACCGGGCGCGGGCGATGGGCCAAGCCGGG GCGATCCGGCCGGGACGGCCCCGCCGCCGCGCGGCTTCGCCTTTGACGAGCCCGCCGACGATCAGACGCAGGAAGGGGCC GATCCCCAGGCCGAGGAACGGCAGGGTCCGACCCCGCCCCGCCCCGAAAGCGGCGCCTCGCCGATTGCGCCGGGTGAAGG CATCCCCACGCGCCCACGCAATCCCCTGCCACTTTCCGATCCGACCTTTCGCCCCGTGCGCCGACGGACGCGGCCACAGC CGGTGGTTAAGGAAGGGGCGAGCCGCGAGTTGAAGGGGTGCCTGATCTTCGTGGCGATCGCCGTGCTTCTGGGCGGCGGC GGCTGGCTGGTCCGCGATTTCGTCGATTTCTCCAGCCTGACGCCCGAGCCGCCCAAGCCGGCCGCCGTCCGCGACGCCCC GCCGGTCACCAAGGTGACGGCGATGAAGGAAAAGACCGTGGTCGATCACCCGACCGAGGGCAAGATGACCCTGGCGCGCA AGCTGGTCGCTCCGCCGATCTCGGCCCCGGCGGGAGAAGGCCAAGCGCCGCCGCCGACCGGCGGAACGGCGATGGGCATC GAAGGCATGACCCCGGGAGCCCCCGCAGGAGACCCGATGACGGGCGGCATCGGCCCCGGGTCCACCGTGTCGGCATCAGC CGATGCCGGCCCGCCCGCCGGCGCCGGAGGCGCGGCCGTGCTTGGTCAGATGGCCGATCAGGCGGTTTGCTATAACGGCA GCCGGGCCCGCCGCGTCGACAGTCTTTATGATCTGCCCGGCGGCTTCGCCATCGTCTATGGACCGGCGGGAGAAGATTCC GAACCGCTGCGCCCAAGGCTGGAGTTCATGCCCGGGGTGCTGGGCCGCGATGCCGGCGGACCCGATACGCTGTATTACGC CAGCTTCGCCGACGCCCCGGTCAGCGGCTTCGAAAGCGGGATGGCGCGGCCGGTCGCCAATACGGATGCGGCCGTCGGCC GGGTCATCCTGTCGTGGGTCGCCGCCGTCGCCAACGGCCCCTGTCCGCCGGCAATCCAGCCGGCCCCATAG
Upstream 100 bases:
>100_bases CCAAATCCTATCAGCGGCCGGTCCTTCGCCCGCCCCGCCCCGATAACGCCGCCGCAAGGACCCGACGTCCCGATCGAACC GTTCTGTCCGGCTTTTCTCG
Downstream 100 bases:
>100_bases GGCGGTGAAGCCCAGGGGGCTCGGAATTTGCTCGAATTGAAAACGGCGCGCCTCCTTTGGGGGAGACGCGCCGCTGATTC ATAAACCACCGGTGAAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSPADSGPRRPPRPTPPTERPPAGREAGPRGAGAARPASGSTPPPGAGDGPSRGDPAGTAPPPRGFAFDEPADDQTQEGA DPQAEERQGPTPPRPESGASPIAPGEGIPTRPRNPLPLSDPTFRPVRRRTRPQPVVKEGASRELKGCLIFVAIAVLLGGG GWLVRDFVDFSSLTPEPPKPAAVRDAPPVTKVTAMKEKTVVDHPTEGKMTLARKLVAPPISAPAGEGQAPPPTGGTAMGI EGMTPGAPAGDPMTGGIGPGSTVSASADAGPPAGAGGAAVLGQMADQAVCYNGSRARRVDSLYDLPGGFAIVYGPAGEDS EPLRPRLEFMPGVLGRDAGGPDTLYYASFADAPVSGFESGMARPVANTDAAVGRVILSWVAAVANGPCPPAIQPAP
Sequences:
>Translated_396_residues MSPADSGPRRPPRPTPPTERPPAGREAGPRGAGAARPASGSTPPPGAGDGPSRGDPAGTAPPPRGFAFDEPADDQTQEGA DPQAEERQGPTPPRPESGASPIAPGEGIPTRPRNPLPLSDPTFRPVRRRTRPQPVVKEGASRELKGCLIFVAIAVLLGGG GWLVRDFVDFSSLTPEPPKPAAVRDAPPVTKVTAMKEKTVVDHPTEGKMTLARKLVAPPISAPAGEGQAPPPTGGTAMGI EGMTPGAPAGDPMTGGIGPGSTVSASADAGPPAGAGGAAVLGQMADQAVCYNGSRARRVDSLYDLPGGFAIVYGPAGEDS EPLRPRLEFMPGVLGRDAGGPDTLYYASFADAPVSGFESGMARPVANTDAAVGRVILSWVAAVANGPCPPAIQPAP >Mature_395_residues SPADSGPRRPPRPTPPTERPPAGREAGPRGAGAARPASGSTPPPGAGDGPSRGDPAGTAPPPRGFAFDEPADDQTQEGAD PQAEERQGPTPPRPESGASPIAPGEGIPTRPRNPLPLSDPTFRPVRRRTRPQPVVKEGASRELKGCLIFVAIAVLLGGGG WLVRDFVDFSSLTPEPPKPAAVRDAPPVTKVTAMKEKTVVDHPTEGKMTLARKLVAPPISAPAGEGQAPPPTGGTAMGIE GMTPGAPAGDPMTGGIGPGSTVSASADAGPPAGAGGAAVLGQMADQAVCYNGSRARRVDSLYDLPGGFAIVYGPAGEDSE PLRPRLEFMPGVLGRDAGGPDTLYYASFADAPVSGFESGMARPVANTDAAVGRVILSWVAAVANGPCPPAIQPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39966; Mature: 39835
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPADSGPRRPPRPTPPTERPPAGREAGPRGAGAARPASGSTPPPGAGDGPSRGDPAGTA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPRGFAFDEPADDQTQEGADPQAEERQGPTPPRPESGASPIAPGEGIPTRPRNPLPLSD CCCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTFRPVRRRTRPQPVVKEGASRELKGCLIFVAIAVLLGGGGWLVRDFVDFSSLTPEPPKP CCCHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC AAVRDAPPVTKVTAMKEKTVVDHPTEGKMTLARKLVAPPISAPAGEGQAPPPTGGTAMGI CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECC EGMTPGAPAGDPMTGGIGPGSTVSASADAGPPAGAGGAAVLGQMADQAVCYNGSRARRVD CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHEEECCHHHHHHH SLYDLPGGFAIVYGPAGEDSEPLRPRLEFMPGVLGRDAGGPDTLYYASFADAPVSGFESG HHHCCCCCEEEEECCCCCCCCCCCHHHHHHCCHHCCCCCCCCCEEEECCCCCCHHHHHHH MARPVANTDAAVGRVILSWVAAVANGPCPPAIQPAP CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SPADSGPRRPPRPTPPTERPPAGREAGPRGAGAARPASGSTPPPGAGDGPSRGDPAGTA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPRGFAFDEPADDQTQEGADPQAEERQGPTPPRPESGASPIAPGEGIPTRPRNPLPLSD CCCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTFRPVRRRTRPQPVVKEGASRELKGCLIFVAIAVLLGGGGWLVRDFVDFSSLTPEPPKP CCCHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC AAVRDAPPVTKVTAMKEKTVVDHPTEGKMTLARKLVAPPISAPAGEGQAPPPTGGTAMGI CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECC EGMTPGAPAGDPMTGGIGPGSTVSASADAGPPAGAGGAAVLGQMADQAVCYNGSRARRVD CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHEEECCHHHHHHH SLYDLPGGFAIVYGPAGEDSEPLRPRLEFMPGVLGRDAGGPDTLYYASFADAPVSGFESG HHHCCCCCEEEEECCCCCCCCCCCHHHHHHCCHHCCCCCCCCCEEEECCCCCCHHHHHHH MARPVANTDAAVGRVILSWVAAVANGPCPPAIQPAP CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA