| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594590
Identifier: 83594590
GI number: 83594590
Start: 3756719
End: 3758002
Strand: Direct
Name: 83594590
Synonym: Rru_A3260
Alternate gene names: NA
Gene position: 3756719-3758002 (Clockwise)
Preceding gene: 83594588
Following gene: 83594596
Centisome position: 86.31
GC content: 71.65
Gene sequence:
>1284_bases GTGGCCGATCAGGGAAAGCGAAAGCCGGCGACGGGTGGACCCAAGCGACGCGATGACGCCGTACCCCTCTCGGGTCGCGA TCCGCGCTTCCATTCTCCCGAGGCGGCGATCCCCGCCGCGCCGCCCCCGCGCTCCCGCCCGCTGTTCCTGCGCGTCTATG TCTGGGCGCCGCTGCTGCTGGCGCTGATGAGCGGCCTTTACGCCGGCTTCTGGGTGTACACGGCGCGGCAGGCGGGACAG GCCCTGGATCGCTGGATCGCCGATCGCGAGGCCGAGGGCTTCGCCCCGCGCCATCGCGGCATCGAAACCGGCGGCTTCCC CTTGGCCGTTCGCCTGACCATCACCGCGCCCTCGCTGACCGCGCCCGAGGATCTGGGGGAATGGAGCTGGTCGGCGCCGC GCCTCACCGCCTCGCTCACCCCCTTCGCCCCCCGCCATGTCACCCTGGACGCCCCCGGCCCCCATCTGATCGCCCTGCCC GGCGACGGCGAGGGAAAAAAGCCGTCCCTGGCGATCTCGGGCAAAACGATGACGGCGGCGCTTGATATCGGCCCCGATGG CGCCATCAGCGAATCCAAGGTCGCCCTGGAGGATCTATCGATCAGTGGCGGAACCAGCGCCCCGACCACCCTGGCCAGCC TTTCCCTGCACACCCTGGCCGGGGCGCTGTATCCGGCGGCCGGCGGCGGGGCGGCGGCGCAAAGCGCCATCCTTGAAATG CGCGGCCTCCGCCCGCCGCCCGATGGCCGCATCGGGCTGTCCGAAATGCTGACCGCGCTGTCGATGAAGGCGCGGCTGAT CGGCCGCCTGCCCGGTGGCCCGCTGGAGCCGGCCTTGACCCGGTGGCGGGACGACAACGGCACCCTGCGCATCGATGACC TGTCGGTGACCTGGCCGCCGCTCAGCTTGCGGGCCTCGGGCAGCCTGGGCATGGACCGCGACCTGCAGCCCTCGGGCGGG CTTTCGGTTCAGGCGCGCGGGCTGTTCGAGCTGATTCGCGGCTTCGCCGACCAGGGATGGACCCGCACCGTCGATTCGGA CATGGCCCGCATGGTGCTTTCGGGCATGTTCCGCGACGGCCAGATCACCCTGCCCGTCACCATCCGCGACCGCGTTCTCT ATGGCGGTCCGGCGCGCCTGCTTGACCTGCCGACCGTGACCTGGGGACCCAAGGGCCCGCGCGCCCTCAACCGCATCGCC CCGGGCTTCGCCATCGACCAGCAGGGAAAAGCCCAGCGTCCCGTCGACTCCGAGGCGCCCCCCCAACGCATCGTCCCCCG CTAG
Upstream 100 bases:
>100_bases AATTCATCGTTCTGCGTCATCTTGCGACCATGCTAAAGGATGTCATGATACCCGTGGTGGGCGAACACCGCTCCCGGGCA TGGGGCAAGGAGAACACAGA
Downstream 100 bases:
>100_bases ACCAAATCCCCAGCACTCTGACGCGGAGTGCGACGACGATCTGCTTGAGCATCAAGATCTTAGAGCGGCGGTGACGCGGA AAACCGGCCCCCGGTTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MADQGKRKPATGGPKRRDDAVPLSGRDPRFHSPEAAIPAAPPPRSRPLFLRVYVWAPLLLALMSGLYAGFWVYTARQAGQ ALDRWIADREAEGFAPRHRGIETGGFPLAVRLTITAPSLTAPEDLGEWSWSAPRLTASLTPFAPRHVTLDAPGPHLIALP GDGEGKKPSLAISGKTMTAALDIGPDGAISESKVALEDLSISGGTSAPTTLASLSLHTLAGALYPAAGGGAAAQSAILEM RGLRPPPDGRIGLSEMLTALSMKARLIGRLPGGPLEPALTRWRDDNGTLRIDDLSVTWPPLSLRASGSLGMDRDLQPSGG LSVQARGLFELIRGFADQGWTRTVDSDMARMVLSGMFRDGQITLPVTIRDRVLYGGPARLLDLPTVTWGPKGPRALNRIA PGFAIDQQGKAQRPVDSEAPPQRIVPR
Sequences:
>Translated_427_residues MADQGKRKPATGGPKRRDDAVPLSGRDPRFHSPEAAIPAAPPPRSRPLFLRVYVWAPLLLALMSGLYAGFWVYTARQAGQ ALDRWIADREAEGFAPRHRGIETGGFPLAVRLTITAPSLTAPEDLGEWSWSAPRLTASLTPFAPRHVTLDAPGPHLIALP GDGEGKKPSLAISGKTMTAALDIGPDGAISESKVALEDLSISGGTSAPTTLASLSLHTLAGALYPAAGGGAAAQSAILEM RGLRPPPDGRIGLSEMLTALSMKARLIGRLPGGPLEPALTRWRDDNGTLRIDDLSVTWPPLSLRASGSLGMDRDLQPSGG LSVQARGLFELIRGFADQGWTRTVDSDMARMVLSGMFRDGQITLPVTIRDRVLYGGPARLLDLPTVTWGPKGPRALNRIA PGFAIDQQGKAQRPVDSEAPPQRIVPR >Mature_426_residues ADQGKRKPATGGPKRRDDAVPLSGRDPRFHSPEAAIPAAPPPRSRPLFLRVYVWAPLLLALMSGLYAGFWVYTARQAGQA LDRWIADREAEGFAPRHRGIETGGFPLAVRLTITAPSLTAPEDLGEWSWSAPRLTASLTPFAPRHVTLDAPGPHLIALPG DGEGKKPSLAISGKTMTAALDIGPDGAISESKVALEDLSISGGTSAPTTLASLSLHTLAGALYPAAGGGAAAQSAILEMR GLRPPPDGRIGLSEMLTALSMKARLIGRLPGGPLEPALTRWRDDNGTLRIDDLSVTWPPLSLRASGSLGMDRDLQPSGGL SVQARGLFELIRGFADQGWTRTVDSDMARMVLSGMFRDGQITLPVTIRDRVLYGGPARLLDLPTVTWGPKGPRALNRIAP GFAIDQQGKAQRPVDSEAPPQRIVPR
Specific function: Unknown
COG id: COG4093
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45358; Mature: 45226
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQGKRKPATGGPKRRDDAVPLSGRDPRFHSPEAAIPAAPPPRSRPLFLRVYVWAPLLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHH ALMSGLYAGFWVYTARQAGQALDRWIADREAEGFAPRHRGIETGGFPLAVRLTITAPSLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEEECCCCC APEDLGEWSWSAPRLTASLTPFAPRHVTLDAPGPHLIALPGDGEGKKPSLAISGKTMTAA CCHHHCCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEECCCEEEEE LDIGPDGAISESKVALEDLSISGGTSAPTTLASLSLHTLAGALYPAAGGGAAAQSAILEM EECCCCCCCCCCCEEHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH RGLRPPPDGRIGLSEMLTALSMKARLIGRLPGGPLEPALTRWRDDNGTLRIDDLSVTWPP HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCEEEEEEEEEECCC LSLRASGSLGMDRDLQPSGGLSVQARGLFELIRGFADQGWTRTVDSDMARMVLSGMFRDG CEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC QITLPVTIRDRVLYGGPARLLDLPTVTWGPKGPRALNRIAPGFAIDQQGKAQRPVDSEAP CEEEEEEEECEEEECCCHHEEECCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCC PQRIVPR CHHCCCC >Mature Secondary Structure ADQGKRKPATGGPKRRDDAVPLSGRDPRFHSPEAAIPAAPPPRSRPLFLRVYVWAPLLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHH ALMSGLYAGFWVYTARQAGQALDRWIADREAEGFAPRHRGIETGGFPLAVRLTITAPSLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEEEEECCCCC APEDLGEWSWSAPRLTASLTPFAPRHVTLDAPGPHLIALPGDGEGKKPSLAISGKTMTAA CCHHHCCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEECCCEEEEE LDIGPDGAISESKVALEDLSISGGTSAPTTLASLSLHTLAGALYPAAGGGAAAQSAILEM EECCCCCCCCCCCEEHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH RGLRPPPDGRIGLSEMLTALSMKARLIGRLPGGPLEPALTRWRDDNGTLRIDDLSVTWPP HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCEEEEEEEEEECCC LSLRASGSLGMDRDLQPSGGLSVQARGLFELIRGFADQGWTRTVDSDMARMVLSGMFRDG CEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC QITLPVTIRDRVLYGGPARLLDLPTVTWGPKGPRALNRIAPGFAIDQQGKAQRPVDSEAP CEEEEEEEECEEEECCCHHEEECCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCC PQRIVPR CHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA