| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is metX
Identifier: 83594596
GI number: 83594596
Start: 3765238
End: 3766413
Strand: Direct
Name: metX
Synonym: Rru_A3266
Alternate gene names: 83594596
Gene position: 3765238-3766413 (Clockwise)
Preceding gene: 83594590
Following gene: 83594597
Centisome position: 86.5
GC content: 64.71
Gene sequence:
>1176_bases ATGAATGTCCTGCCGGCGGCATCCCAACCGCTCAATCAAAGCGTCACGCTGTGCGTCGACGCGCCCATGCGCCTGGACAG CGGCCTGGAGCTGGGGCCGCTCACCGTGGCCTATCAGACCATCGGTCGCCTCAACGCCGAGCGGACCAACGCCATCTTGA TATGCCACGCGCTGACCGGCGACCAGCATGTCATCGGTCCCCATCCGGTCACCGGCCGGCCGGGCTGGTGGGAGACCCTG GTCGGTCCGGGCAAGACCATCGATACCGATCGCTATTTCATCATCTGCTCGAATGTTCTGGGCGGCTGCCTGGGGACCAC TGGCCCCAAGGAGATCAACCCGGCGACCGGCAAGCCCTGGGGGCTTGGCTTTCCCGTCATCACCATCGGCGACATGGTGC GCGCCCAGGCCCTGTTGCTCGACCACCTGGGCATCGAGCGGCTGTTTTGCGCCATCGGCGGATCGATGGGGGCGATGCAG GTGCTGCAATGGGCGGTCAGCTATCCCGAACGGGTGCGCGCCGTGGTGCCGATCGCCGGATCCTGGCGCCATTCGGCCCA GAACATCGCCTTTCACGAGGTCGGCCGCCAAGCGATCATGGCCGATCCCGATTGGAACGGCGGCGATTACCTGAACCAGG GCACGGTTCCCCGCCGGGGGCTGGCGGTGGCGCGGATGACGGCGCATATCACCTATCTGTCCGAACCGGCGCTCCAAAGC AAATTCGGCCGCAAGCTCCAGGACCGCGCCTCGATCACCTATGGCTTCGATGCGGATTTCCAGGTGGAAAGCTATCTGCG CCATCAGGGGGCGAATTTCGTCAAACGCTTCGACGCCAACAGTTATCTCTACATCACCCGGGCGATGGATTATTTCGATC TGGCCGCCGAGCATGACGGCGTGCTGGCCCGCGCCTTCCAAGGCACCAAGGTGCGCTTTTGCGTGGTGTCGTTCACCAGC GACTGGCTGTTCCCCACCGCCGAAAGCCGGGCGGTGGTGCGGGCGATGAACGCGGCAGCGGCCGATGTCAGCTTTGTCGA AGTCACCACCGACAAGGGCCACGACGCCTTCCTTCTCGACGAGCCCGAGTTCCACGACACCCTTCAGGGCTTCCTTGATG GCGCGGCCGACATGTTCGGCCTGCCGCGCGGCCTTTTTTCGGGGATCCGTCCATGA
Upstream 100 bases:
>100_bases ACGTTGACAGACGGGGTACCCCTTTCTAGCAATTCATCCCCCGCCCCCCGTCCCGCCCAAGGCGGGCGGGTCGGCCCGAT CGGAAGGAAGCAGCGCCGCG
Downstream 100 bases:
>100_bases CGCCCACCGGCCCCACCGGCGCCATTCGCTATGACCTGCAGCTGATCGCCGACATGGTGACCCCGGGCGCCCGGGTTCTC GATGTCGGCTGCGGCGAGGG
Product: homoserine O-acetyltransferase
Products: NA
Alternate protein names: Homoserine O-trans-acetylase; HTA; Homoserine transacetylase
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNVLPAASQPLNQSVTLCVDAPMRLDSGLELGPLTVAYQTIGRLNAERTNAILICHALTGDQHVIGPHPVTGRPGWWETL VGPGKTIDTDRYFIICSNVLGGCLGTTGPKEINPATGKPWGLGFPVITIGDMVRAQALLLDHLGIERLFCAIGGSMGAMQ VLQWAVSYPERVRAVVPIAGSWRHSAQNIAFHEVGRQAIMADPDWNGGDYLNQGTVPRRGLAVARMTAHITYLSEPALQS KFGRKLQDRASITYGFDADFQVESYLRHQGANFVKRFDANSYLYITRAMDYFDLAAEHDGVLARAFQGTKVRFCVVSFTS DWLFPTAESRAVVRAMNAAAADVSFVEVTTDKGHDAFLLDEPEFHDTLQGFLDGAADMFGLPRGLFSGIRP
Sequences:
>Translated_391_residues MNVLPAASQPLNQSVTLCVDAPMRLDSGLELGPLTVAYQTIGRLNAERTNAILICHALTGDQHVIGPHPVTGRPGWWETL VGPGKTIDTDRYFIICSNVLGGCLGTTGPKEINPATGKPWGLGFPVITIGDMVRAQALLLDHLGIERLFCAIGGSMGAMQ VLQWAVSYPERVRAVVPIAGSWRHSAQNIAFHEVGRQAIMADPDWNGGDYLNQGTVPRRGLAVARMTAHITYLSEPALQS KFGRKLQDRASITYGFDADFQVESYLRHQGANFVKRFDANSYLYITRAMDYFDLAAEHDGVLARAFQGTKVRFCVVSFTS DWLFPTAESRAVVRAMNAAAADVSFVEVTTDKGHDAFLLDEPEFHDTLQGFLDGAADMFGLPRGLFSGIRP >Mature_391_residues MNVLPAASQPLNQSVTLCVDAPMRLDSGLELGPLTVAYQTIGRLNAERTNAILICHALTGDQHVIGPHPVTGRPGWWETL VGPGKTIDTDRYFIICSNVLGGCLGTTGPKEINPATGKPWGLGFPVITIGDMVRAQALLLDHLGIERLFCAIGGSMGAMQ VLQWAVSYPERVRAVVPIAGSWRHSAQNIAFHEVGRQAIMADPDWNGGDYLNQGTVPRRGLAVARMTAHITYLSEPALQS KFGRKLQDRASITYGFDADFQVESYLRHQGANFVKRFDANSYLYITRAMDYFDLAAEHDGVLARAFQGTKVRFCVVSFTS DWLFPTAESRAVVRAMNAAAADVSFVEVTTDKGHDAFLLDEPEFHDTLQGFLDGAADMFGLPRGLFSGIRP
Specific function: Unknown
COG id: COG2021
COG function: function code E; Homoserine acetyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HTA family
Homologues:
Organism=Saccharomyces cerevisiae, GI6324052, Length=222, Percent_Identity=40.5405405405405, Blast_Score=161, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): METX_RHORT (Q2RP84)
Other databases:
- EMBL: CP000230 - RefSeq: YP_428348.1 - ProteinModelPortal: Q2RP84 - SMR: Q2RP84 - STRING: Q2RP84 - GeneID: 3836713 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A3266 - NMPDR: fig|1085.1.peg.907 - eggNOG: COG2021 - HOGENOM: HBG692920 - OMA: VSFTSDW - PhylomeDB: Q2RP84 - ProtClustDB: PRK00175 - BioCyc: RRUB269796:RRU_A3266-MONOMER - GO: GO:0005737 - HAMAP: MF_00296 - InterPro: IPR000073 - InterPro: IPR008220 - PIRSF: PIRSF000443 - TIGRFAMs: TIGR01392
Pfam domain/function: PF00561 Abhydrolase_1
EC number: =2.3.1.31
Molecular weight: Translated: 42656; Mature: 42656
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: ACT_SITE 155-155 ACT_SITE 354-354
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLPAASQPLNQSVTLCVDAPMRLDSGLELGPLTVAYQTIGRLNAERTNAILICHALTG CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECC DQHVIGPHPVTGRPGWWETLVGPGKTIDTDRYFIICSNVLGGCLGTTGPKEINPATGKPW CCEECCCCCCCCCCCCHHHHCCCCCEECCCCEEEEECHHHHHHHCCCCCCCCCCCCCCCC GLGFPVITIGDMVRAQALLLDHLGIERLFCAIGGSMGAMQVLQWAVSYPERVRAVVPIAG CCCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHCCHHHEEEEEECCC SWRHSAQNIAFHEVGRQAIMADPDWNGGDYLNQGTVPRRGLAVARMTAHITYLSEPALQS CCCHHHCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCHHHHH KFGRKLQDRASITYGFDADFQVESYLRHQGANFVKRFDANSYLYITRAMDYFDLAAEHDG HHHHHHHHCCCEEECCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEEECCHHHHHHHCCCC VLARAFQGTKVRFCVVSFTSDWLFPTAESRAVVRAMNAAAADVSFVEVTTDKGHDAFLLD EEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCEEEEC EPEFHDTLQGFLDGAADMFGLPRGLFSGIRP CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCC >Mature Secondary Structure MNVLPAASQPLNQSVTLCVDAPMRLDSGLELGPLTVAYQTIGRLNAERTNAILICHALTG CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECC DQHVIGPHPVTGRPGWWETLVGPGKTIDTDRYFIICSNVLGGCLGTTGPKEINPATGKPW CCEECCCCCCCCCCCCHHHHCCCCCEECCCCEEEEECHHHHHHHCCCCCCCCCCCCCCCC GLGFPVITIGDMVRAQALLLDHLGIERLFCAIGGSMGAMQVLQWAVSYPERVRAVVPIAG CCCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHCCHHHEEEEEECCC SWRHSAQNIAFHEVGRQAIMADPDWNGGDYLNQGTVPRRGLAVARMTAHITYLSEPALQS CCCHHHCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCHHHHH KFGRKLQDRASITYGFDADFQVESYLRHQGANFVKRFDANSYLYITRAMDYFDLAAEHDG HHHHHHHHCCCEEECCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEEECCHHHHHHHCCCC VLARAFQGTKVRFCVVSFTSDWLFPTAESRAVVRAMNAAAADVSFVEVTTDKGHDAFLLD EEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCEEEEC EPEFHDTLQGFLDGAADMFGLPRGLFSGIRP CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA