Click here to switch to the map view.

The map label for this gene is yfiS [H]

Identifier: 83594257

GI number: 83594257

Start: 3367455

End: 3368732

Strand: Reverse

Name: yfiS [H]

Synonym: Rru_A2925

Alternate gene names: 83594257

Gene position: 3368732-3367455 (Counterclockwise)

Preceding gene: 83594258

Following gene: 83594256

Centisome position: 77.39

GC content: 66.51

Gene sequence:

>1278_bases
ATGAATGCGGACCAAGCGCCCGCGCCTTTGGAAAAGGACTCTGTGATCATGATGTCCGATCCCGGCGAGGGGCGATGGCG
GCTGCGCTTCTGGACGATTTTCGGCGGGCAGGTCCTCTCGCTCTGCGGCTCGTCGCTGACCCAGTTCGTCCTGATGTGGT
GGATCGCCGATACGACGGGCAGTGTCGCGGCGCTGTCGGTGGCGGGCCTTGCCGCCCTGCTGCCCCATGCCCTCTTCAGC
CCGCTGGGAGGGGTTCTTGCCGACCGTTACAGCCGGCGGGTTTTGATGGCCTTGACGGACATCGTCAGCGCGCTGTGCAT
GGTCGTGTTGATCGCCCTGTTCCTGACGGAGCGGGTGGAGATGTGGCATGTCTATCTGATGATGGCGATCCGTGGGGCCA
TGCAGGCGCTTCAGGAGCCGGCGGCGGTCGCCTCCCTGGGAATGCTGGTGCCGCGCTCGTTCCTTTCCCGGGTCGGCGGC
CTGCAACAAACCCTGCAAAGCATGACGCAGGTGGTCGCCGCTCCCCTTGGCGCGCTGGCGATGAGCGTGCTGCCGCTGGG
GTGGGCCCTCAGCATCGATGTCGTCACCGCCCTGTTCGGCATCGTCCCGTTGCTGATCTTCCGGATCCCCCAAAACCAAA
TTCCCGCCGGGGAGCGGACCGGCGTCTGGCGGGAGTTTCGTGACGGGATCGGTCTGGTACGGCGGTCGCGGGGCCTGAGG
CACCTGTTTTTGCTGCTCGCCGTCGGCTTGTTGGCCGTCATGCCATCGCTCATGCTGGTTCCCTTGCTGGTGAAGGAGCA
TTTCGGCGGCGGAGCCGGCGAGGTGGCGCTGATGGAGGGACTATCGGGGTTTGGCATGATCGCTGGCGGCATGATCGTGA
CGGCGTTCGCGCCGCGGCGGCAGGTTCCCTGGGTGTTGTGGGGCATGTCCCTGTCGTGTCTGACGCTGGCCTTGACCGGT
TTGGCGCCCGCCGGCTTGTTCGGCGTCGCCGTCCTGTGGTGGGTCCTCAGCGGTTTGACCTACTCGCTGAGCGCGGCTCC
CTGCATGACGCTGCTGCAGATGGTCGTTCCCAACCATCTGCTGGGGCGGACGCAATCCCTGCTCAACACGATGCTGAGCC
TCGCCGCCCCCGTGGGGCTGGTCATCACCGCGCTGTTGAGCGCCCAGGTCGACGTGCGCGCCCTGTTCGTCATGACCGGG
GCCTTCGCGGCGATCGTGACCGCCCTGGGATTCCTATCGCCCGCCCTGATGACGCTGGAGGACACGCCGCCGCGCTGA

Upstream 100 bases:

>100_bases
GCTTGCGCCGCGAGGAAATCGCCAACGCCGTGGCCCTCTACAAGGCCTTGGGCGGCGGATCGACCGACGTCCGAGCGCCG
GGAATGGGCGGGCCGGTCCA

Downstream 100 bases:

>100_bases
CGGGCGGATCCTGGGGGCGGCCTTTCCACACACAGCGGCCACGTCGGCTTCTTCATTCGGCTGCGGGACGTGATAGGATT
CGGCGAGGAGGACTTTGGCG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MNADQAPAPLEKDSVIMMSDPGEGRWRLRFWTIFGGQVLSLCGSSLTQFVLMWWIADTTGSVAALSVAGLAALLPHALFS
PLGGVLADRYSRRVLMALTDIVSALCMVVLIALFLTERVEMWHVYLMMAIRGAMQALQEPAAVASLGMLVPRSFLSRVGG
LQQTLQSMTQVVAAPLGALAMSVLPLGWALSIDVVTALFGIVPLLIFRIPQNQIPAGERTGVWREFRDGIGLVRRSRGLR
HLFLLLAVGLLAVMPSLMLVPLLVKEHFGGGAGEVALMEGLSGFGMIAGGMIVTAFAPRRQVPWVLWGMSLSCLTLALTG
LAPAGLFGVAVLWWVLSGLTYSLSAAPCMTLLQMVVPNHLLGRTQSLLNTMLSLAAPVGLVITALLSAQVDVRALFVMTG
AFAAIVTALGFLSPALMTLEDTPPR

Sequences:

>Translated_425_residues
MNADQAPAPLEKDSVIMMSDPGEGRWRLRFWTIFGGQVLSLCGSSLTQFVLMWWIADTTGSVAALSVAGLAALLPHALFS
PLGGVLADRYSRRVLMALTDIVSALCMVVLIALFLTERVEMWHVYLMMAIRGAMQALQEPAAVASLGMLVPRSFLSRVGG
LQQTLQSMTQVVAAPLGALAMSVLPLGWALSIDVVTALFGIVPLLIFRIPQNQIPAGERTGVWREFRDGIGLVRRSRGLR
HLFLLLAVGLLAVMPSLMLVPLLVKEHFGGGAGEVALMEGLSGFGMIAGGMIVTAFAPRRQVPWVLWGMSLSCLTLALTG
LAPAGLFGVAVLWWVLSGLTYSLSAAPCMTLLQMVVPNHLLGRTQSLLNTMLSLAAPVGLVITALLSAQVDVRALFVMTG
AFAAIVTALGFLSPALMTLEDTPPR
>Mature_425_residues
MNADQAPAPLEKDSVIMMSDPGEGRWRLRFWTIFGGQVLSLCGSSLTQFVLMWWIADTTGSVAALSVAGLAALLPHALFS
PLGGVLADRYSRRVLMALTDIVSALCMVVLIALFLTERVEMWHVYLMMAIRGAMQALQEPAAVASLGMLVPRSFLSRVGG
LQQTLQSMTQVVAAPLGALAMSVLPLGWALSIDVVTALFGIVPLLIFRIPQNQIPAGERTGVWREFRDGIGLVRRSRGLR
HLFLLLAVGLLAVMPSLMLVPLLVKEHFGGGAGEVALMEGLSGFGMIAGGMIVTAFAPRRQVPWVLWGMSLSCLTLALTG
LAPAGLFGVAVLWWVLSGLTYSLSAAPCMTLLQMVVPNHLLGRTQSLLNTMLSLAAPVGLVITALLSAQVDVRALFVMTG
AFAAIVTALGFLSPALMTLEDTPPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45297; Mature: 45297

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNADQAPAPLEKDSVIMMSDPGEGRWRLRFWTIFGGQVLSLCGSSLTQFVLMWWIADTTG
CCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVAALSVAGLAALLPHALFSPLGGVLADRYSRRVLMALTDIVSALCMVVLIALFLTERVE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MWHVYLMMAIRGAMQALQEPAAVASLGMLVPRSFLSRVGGLQQTLQSMTQVVAAPLGALA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
MSVLPLGWALSIDVVTALFGIVPLLIFRIPQNQIPAGERTGVWREFRDGIGLVRRSRGLR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH
HLFLLLAVGLLAVMPSLMLVPLLVKEHFGGGAGEVALMEGLSGFGMIAGGMIVTAFAPRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHCCHHHEECCCCC
QVPWVLWGMSLSCLTLALTGLAPAGLFGVAVLWWVLSGLTYSLSAAPCMTLLQMVVPNHL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHH
LGRTQSLLNTMLSLAAPVGLVITALLSAQVDVRALFVMTGAFAAIVTALGFLSPALMTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DTPPR
CCCCC
>Mature Secondary Structure
MNADQAPAPLEKDSVIMMSDPGEGRWRLRFWTIFGGQVLSLCGSSLTQFVLMWWIADTTG
CCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVAALSVAGLAALLPHALFSPLGGVLADRYSRRVLMALTDIVSALCMVVLIALFLTERVE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MWHVYLMMAIRGAMQALQEPAAVASLGMLVPRSFLSRVGGLQQTLQSMTQVVAAPLGALA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
MSVLPLGWALSIDVVTALFGIVPLLIFRIPQNQIPAGERTGVWREFRDGIGLVRRSRGLR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH
HLFLLLAVGLLAVMPSLMLVPLLVKEHFGGGAGEVALMEGLSGFGMIAGGMIVTAFAPRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHCCHHHEECCCCC
QVPWVLWGMSLSCLTLALTGLAPAGLFGVAVLWWVLSGLTYSLSAAPCMTLLQMVVPNHL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHH
LGRTQSLLNTMLSLAAPVGLVITALLSAQVDVRALFVMTGAFAAIVTALGFLSPALMTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DTPPR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]