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The map label for this gene is yibD [C]

Identifier: 83594256

GI number: 83594256

Start: 3366493

End: 3367281

Strand: Reverse

Name: yibD [C]

Synonym: Rru_A2924

Alternate gene names: 83594256

Gene position: 3367281-3366493 (Counterclockwise)

Preceding gene: 83594257

Following gene: 83594254

Centisome position: 77.36

GC content: 69.2

Gene sequence:

>789_bases
ATGGACGACGCGTCGCCGACCCTCGCCAGCGTCATCATCCCCGCCTTCAATGCCGAGGCGGTGCTTGAACAGGCCGTCGA
CAGCGTGCGGGCCAGCATTGCCCACTGCGCGGCCCATCTGGCCGCCGCGCCGGCCGGCGCCTTCGAGATCATCCTGGTCG
ATGACGCGTCAACCGACGCCACCCTGGCCCTCGCCCGGCGCTTGGCGGCCGAAGACCCGCGGATCACCGTGATCGCCCGC
CGGCGCAACGGCGGCGCCGGTCCGGCGCGCAATGCCGGGGCGCGGGCGGCCAAGGGCGAGATCTTGTTTTACCTTGATGC
CGATGACGGCTTTTTGCCGCCCCATGTTCTGGCCTGCCTTCAGGAACTGCTCCGCCATCCCGAGGCCGGGCTGGTCAAGA
CCGGCATCGCCGTCGACTTTCCCCTGACCGAGGAATGGCGCCAAGCCTTGATCGTCAGCGTGGTTTTCAACACGGCGCTG
TGGAAGCGCTGCCACGAGGCGATCGGCGGCTTCATGGAGGATCCCGAGCTGTGCGTTCTGCGCTGCGAGGACGTGTTTTA
TTGCGATCTGCTGATGCGGGCCTTTCCGGCGCGCGGCATCGAGGCGCAAACCGTGCGCCATACCCTGCGCCCCGGCGGCG
CTTTTGATGGCCAGCGCGCCAAATTCTCCGCCCCACCGGGCGAGGGCCCCGAGTCGCTGACCCCCGCCCAAAGCGCCGTG
CTGCCCTTGATCCGCGCCCGCCACGCCGAGCGCTTGGCCCGGCTTGGCCTGGAAGACGCGGAGGCCTAA

Upstream 100 bases:

>100_bases
TAGGATTCGGCGAGGAGGACTTTGGCGGATTTGGTCCAAATACAGGGACGCGCGGAACGCCGGCGCTCCTTTTTCCGCTT
GCCGCTCGGGAGGTTTTACC

Downstream 100 bases:

>100_bases
ACGCCTAAGCTCGCCCTTCGACCTCGGCGAGCAGGTCGACCAGCCGGGCGACCTGGGTGTCCCACGACCAGCCGGCCATG
AAGCGGGCGCCGGCGCTTCC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyl Transferase

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MDDASPTLASVIIPAFNAEAVLEQAVDSVRASIAHCAAHLAAAPAGAFEIILVDDASTDATLALARRLAAEDPRITVIAR
RRNGGAGPARNAGARAAKGEILFYLDADDGFLPPHVLACLQELLRHPEAGLVKTGIAVDFPLTEEWRQALIVSVVFNTAL
WKRCHEAIGGFMEDPELCVLRCEDVFYCDLLMRAFPARGIEAQTVRHTLRPGGAFDGQRAKFSAPPGEGPESLTPAQSAV
LPLIRARHAERLARLGLEDAEA

Sequences:

>Translated_262_residues
MDDASPTLASVIIPAFNAEAVLEQAVDSVRASIAHCAAHLAAAPAGAFEIILVDDASTDATLALARRLAAEDPRITVIAR
RRNGGAGPARNAGARAAKGEILFYLDADDGFLPPHVLACLQELLRHPEAGLVKTGIAVDFPLTEEWRQALIVSVVFNTAL
WKRCHEAIGGFMEDPELCVLRCEDVFYCDLLMRAFPARGIEAQTVRHTLRPGGAFDGQRAKFSAPPGEGPESLTPAQSAV
LPLIRARHAERLARLGLEDAEA
>Mature_262_residues
MDDASPTLASVIIPAFNAEAVLEQAVDSVRASIAHCAAHLAAAPAGAFEIILVDDASTDATLALARRLAAEDPRITVIAR
RRNGGAGPARNAGARAAKGEILFYLDADDGFLPPHVLACLQELLRHPEAGLVKTGIAVDFPLTEEWRQALIVSVVFNTAL
WKRCHEAIGGFMEDPELCVLRCEDVFYCDLLMRAFPARGIEAQTVRHTLRPGGAFDGQRAKFSAPPGEGPESLTPAQSAV
LPLIRARHAERLARLGLEDAEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 28000; Mature: 28000

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDASPTLASVIIPAFNAEAVLEQAVDSVRASIAHCAAHLAAAPAGAFEIILVDDASTDA
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHH
TLALARRLAAEDPRITVIARRRNGGAGPARNAGARAAKGEILFYLDADDGFLPPHVLACL
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
QELLRHPEAGLVKTGIAVDFPLTEEWRQALIVSVVFNTALWKRCHEAIGGFMEDPELCVL
HHHHHCCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
RCEDVFYCDLLMRAFPARGIEAQTVRHTLRPGGAFDGQRAKFSAPPGEGPESLTPAQSAV
EECHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LPLIRARHAERLARLGLEDAEA
HHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDDASPTLASVIIPAFNAEAVLEQAVDSVRASIAHCAAHLAAAPAGAFEIILVDDASTDA
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHH
TLALARRLAAEDPRITVIARRRNGGAGPARNAGARAAKGEILFYLDADDGFLPPHVLACL
HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
QELLRHPEAGLVKTGIAVDFPLTEEWRQALIVSVVFNTALWKRCHEAIGGFMEDPELCVL
HHHHHCCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
RCEDVFYCDLLMRAFPARGIEAQTVRHTLRPGGAFDGQRAKFSAPPGEGPESLTPAQSAV
EECHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LPLIRARHAERLARLGLEDAEA
HHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA