| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is mhpC [C]
Identifier: 83593974
GI number: 83593974
Start: 3071728
End: 3072645
Strand: Reverse
Name: mhpC [C]
Synonym: Rru_A2642
Alternate gene names: 83593974
Gene position: 3072645-3071728 (Counterclockwise)
Preceding gene: 83593979
Following gene: 83593973
Centisome position: 70.59
GC content: 68.52
Gene sequence:
>918_bases ATGGCCGACGACGAGACGACCCTCCACCGGCTGCGCACGCCGGTTCTTGACATCGCCTATCACGAATTTGGGCCGGCCGG CGGCGAAGCGGTGGTTCTTCTCCACGGCTTTCCCTATGACCCGCGCTGTTATGACCAGATGGCGGCGCGGGTGGCGGCGC GCGGCTACCGGGTGATCGTGCCCTATTTGCGGGGCTACGGGCCGACGCGGTTCCTGTCGGACGACACCCCGCGCTCGGGA CAGCAAGGCGCCCTGGCCGCCGATCTGCGCGATCTGCTTGACGGGCTGGCGATCGGCCGCGCCGCCCTGGTCGGCTATGA CTGGGGCGGCCGGGCGGCCTGCATCGCCGCCGCCCTCTGGCCCGAGCGGGTGCGCGCCCTGGTGACGGGTGATGGCTATA ACATCCAGGATATCAAGGGCTTCGCCCAGCCGCTCGCCCCCGAGGATGAATATCGTTTCTGGTATCAGTATTACTTCCAC ACGCCGCGCGGCCAAGCCGGGCTGACCGCCCATCGGGCGGCCTTTTGCGACTTGTTATGGCGGCTGTGGTCGCCAAGCTG GGATTTCGATCCGCAGACCTTCGCGCGAACGGCGGTTTCCTTCGAGAACCCGGATTTCGTCGCGGTCGTTATCCAGTCCT ATCGCCACCGCTACGGCTATGCCGAGGGCGACCCCGCCTATGACGCCATCGAAGCCCGCCTCGCCGCCCAGCCGGCGATC GGCGTGCCGACGATCTCGTTGTGCGGCGCCGACGATGGCGTCGGCCCGCCACCCGCCCGTGACCCCGATCGCTCCCACTT CACCGGCCCCTATGAACGCCGCCTGCTGCCCGGCATCGGCCACAACATCCCCCAGGAAGCCCCCGAGGAAACCACCCGGG CGCTGTTCGATCTGCTGGAGGGGGGGAGGCTGCGCTGA
Upstream 100 bases:
>100_bases TCGATCGACCGGCCACTCGCCGATAAGGCGGCGCTTCGCGCGTGATCGCAGCGCCAAGGTCGGATACCCTTGTGGCCTCG ATGGACAGGGGAGGACGGGG
Downstream 100 bases:
>100_bases TCGTCGATTTTGTGATTCGGCGCCCCTTGGCGACGCCGAAAAAACGGGGACCATCACCCTGTCATCATGCTCATTCAGAG AACTTGTTTAGGTATTTTCA
Product: alpha/beta hydrolase fold
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: Alpha/Beta Hydrolase Fold; Epoxide Hydrolase Protein; Epoxide Hydrolase; Alpha/Beta Hydrolase; Alpha/Beta Family Hydrolase; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Fold Family Hydrolase; Hydrolase; Hydrolase Alpha/Beta Fold; Hydrolase Alpha/Beta Fold Family; Dehalogenase/Hydrolase; S33 Family Peptidase; Alpha/Beta Hydrolase Superfamily Protein; Epoxide Hydrolase EphB; Alpha/Beta Hydrolase Fold Family Hydrolase; Alpha/Beta Hydrolase Superfamily Hydrolase/Acyltransferase; Hydrolase Or Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Epoxide Hydrolase-Like Protein
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MADDETTLHRLRTPVLDIAYHEFGPAGGEAVVLLHGFPYDPRCYDQMAARVAARGYRVIVPYLRGYGPTRFLSDDTPRSG QQGALAADLRDLLDGLAIGRAALVGYDWGGRAACIAAALWPERVRALVTGDGYNIQDIKGFAQPLAPEDEYRFWYQYYFH TPRGQAGLTAHRAAFCDLLWRLWSPSWDFDPQTFARTAVSFENPDFVAVVIQSYRHRYGYAEGDPAYDAIEARLAAQPAI GVPTISLCGADDGVGPPPARDPDRSHFTGPYERRLLPGIGHNIPQEAPEETTRALFDLLEGGRLR
Sequences:
>Translated_305_residues MADDETTLHRLRTPVLDIAYHEFGPAGGEAVVLLHGFPYDPRCYDQMAARVAARGYRVIVPYLRGYGPTRFLSDDTPRSG QQGALAADLRDLLDGLAIGRAALVGYDWGGRAACIAAALWPERVRALVTGDGYNIQDIKGFAQPLAPEDEYRFWYQYYFH TPRGQAGLTAHRAAFCDLLWRLWSPSWDFDPQTFARTAVSFENPDFVAVVIQSYRHRYGYAEGDPAYDAIEARLAAQPAI GVPTISLCGADDGVGPPPARDPDRSHFTGPYERRLLPGIGHNIPQEAPEETTRALFDLLEGGRLR >Mature_304_residues ADDETTLHRLRTPVLDIAYHEFGPAGGEAVVLLHGFPYDPRCYDQMAARVAARGYRVIVPYLRGYGPTRFLSDDTPRSGQ QGALAADLRDLLDGLAIGRAALVGYDWGGRAACIAAALWPERVRALVTGDGYNIQDIKGFAQPLAPEDEYRFWYQYYFHT PRGQAGLTAHRAAFCDLLWRLWSPSWDFDPQTFARTAVSFENPDFVAVVIQSYRHRYGYAEGDPAYDAIEARLAAQPAIG VPTISLCGADDGVGPPPARDPDRSHFTGPYERRLLPGIGHNIPQEAPEETTRALFDLLEGGRLR
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.- [C]
Molecular weight: Translated: 33797; Mature: 33666
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDETTLHRLRTPVLDIAYHEFGPAGGEAVVLLHGFPYDPRCYDQMAARVAARGYRVIV CCCCHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEE PYLRGYGPTRFLSDDTPRSGQQGALAADLRDLLDGLAIGRAALVGYDWGGRAACIAAALW HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHC PERVRALVTGDGYNIQDIKGFAQPLAPEDEYRFWYQYYFHTPRGQAGLTAHRAAFCDLLW HHHHHEEECCCCCCHHHHHHHHHCCCCCHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHH RLWSPSWDFDPQTFARTAVSFENPDFVAVVIQSYRHRYGYAEGDPAYDAIEARLAAQPAI HHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC GVPTISLCGADDGVGPPPARDPDRSHFTGPYERRLLPGIGHNIPQEAPEETTRALFDLLE CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC GGRLR CCCCC >Mature Secondary Structure ADDETTLHRLRTPVLDIAYHEFGPAGGEAVVLLHGFPYDPRCYDQMAARVAARGYRVIV CCCHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEE PYLRGYGPTRFLSDDTPRSGQQGALAADLRDLLDGLAIGRAALVGYDWGGRAACIAAALW HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHC PERVRALVTGDGYNIQDIKGFAQPLAPEDEYRFWYQYYFHTPRGQAGLTAHRAAFCDLLW HHHHHEEECCCCCCHHHHHHHHHCCCCCHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHH RLWSPSWDFDPQTFARTAVSFENPDFVAVVIQSYRHRYGYAEGDPAYDAIEARLAAQPAI HHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC GVPTISLCGADDGVGPPPARDPDRSHFTGPYERRLLPGIGHNIPQEAPEETTRALFDLLE CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC GGRLR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA