| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593979
Identifier: 83593979
GI number: 83593979
Start: 3076296
End: 3077426
Strand: Reverse
Name: 83593979
Synonym: Rru_A2647
Alternate gene names: NA
Gene position: 3077426-3076296 (Counterclockwise)
Preceding gene: 83593982
Following gene: 83593974
Centisome position: 70.7
GC content: 68.26
Gene sequence:
>1131_bases ATGCCCCGTTTCCTCCGCACGCTTTTGGGATCTGGCGCTTTGGTGGGTCTGGTCGCTGGCCCGGTGGCGGCGCGGGAGGC GCCTTTAGTGGTGACGACGCGGGACGCGTCAACACCTGTGACGACGCGGGACGCGTCGATGACCGACCCGACGCGGGACG CGTCAATGAATGACCCGACGCGGGACGCGTCGAGTACCAAGGTCCCCTATGACTGGACCCAGGAGTTTCCCAAGGCCGAT TGGTCGCGGTTGCGCATCGATCCGGCCGAGATGGCGTCGGGCGGACCGGTGCGCGGCGGCATTCCGGCCATCGACGCTCC GACCCTGCGCGCCGCCAAGGCCATTCGCCCGCTGCAGATCGGCGAGGCCGAGCCGGTGATCGGAGTCAGCCTGAATGGCG AAATGCGCGCCTATCCGCTGTCGGTGCTGATCTGGCACGAGGTGATCAACGATACCCTGGGCGGCCTGCCCATCGCCGTC ACCTATTCGCCGCTGTGCAATATCACCCGGGTTTTCGATCGGCGGGTCGGCGAGGCCGTTCTTGATTTCGCCGCCACCGG GCGTTTGCGCCATTCCTGCCAGATGCTGTTTGATCGCCAAAGCGAGTCGTGGTGGGAACAGGCCAGCGCCCGGGCGGTTT CGGGCCTCTATGCCGATGAAACCCTGCGCGCCCTGCCGGCCCGCCTGGAAAGCTTCGCCGCCTTCAAGGCGCGGGCGGGC GAGGGGGCGATGGTCGTCATTCCCGGCCAGCCGTCCAAGCGCCAATACGGCGCCAATCCCTATTGGGGCTATGACCGCGC CGACAAACCGATGTTCAGCGAGGGCCCCTTGCCCGACGGCATTGCGCCGCTGGCCCGGGTGGTGGCGGTGGGCGAGCGCG CCTGGGCGCTGGACCTGCTGAGCGAAAAGGGGCGGATCGAAGACGGCGATCTGGTGATCGACTGGGCGCCCGGTCAGCAG AGCGCTGTCGATGCGCCGCTGATCGCCAAAAGCCACGCCGTGGGCGGGGCCATCGTCTCGCGCCGCGGCGCCGATGGCGC CCTGAGCGAGGTTGAGCACACCGTGCCCTTCGCCTTCGCCTTCCACGCCCTGCATCCCACGGCGACCATCCTCACCCGCG ACGGCCGTTAA
Upstream 100 bases:
>100_bases CTGACGTGGCTTAAGTGACCACCGTTGCGCGGCCCATGCAAACCCAACCGCGCGCCAATGACAAGCCGCCCTGTCGTCCA CGCCTTGGGAGATCCGATCG
Downstream 100 bases:
>100_bases TCGCCCACCCCCTGGGGTTAGGGCAGAAGGCGCGGCCGGGATTGGGGAAGCTAACCCCGCGCCGCGCCGCGAAGGGCGGC CAGGGCCTGATCGTCGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MPRFLRTLLGSGALVGLVAGPVAAREAPLVVTTRDASTPVTTRDASMTDPTRDASMNDPTRDASSTKVPYDWTQEFPKAD WSRLRIDPAEMASGGPVRGGIPAIDAPTLRAAKAIRPLQIGEAEPVIGVSLNGEMRAYPLSVLIWHEVINDTLGGLPIAV TYSPLCNITRVFDRRVGEAVLDFAATGRLRHSCQMLFDRQSESWWEQASARAVSGLYADETLRALPARLESFAAFKARAG EGAMVVIPGQPSKRQYGANPYWGYDRADKPMFSEGPLPDGIAPLARVVAVGERAWALDLLSEKGRIEDGDLVIDWAPGQQ SAVDAPLIAKSHAVGGAIVSRRGADGALSEVEHTVPFAFAFHALHPTATILTRDGR
Sequences:
>Translated_376_residues MPRFLRTLLGSGALVGLVAGPVAAREAPLVVTTRDASTPVTTRDASMTDPTRDASMNDPTRDASSTKVPYDWTQEFPKAD WSRLRIDPAEMASGGPVRGGIPAIDAPTLRAAKAIRPLQIGEAEPVIGVSLNGEMRAYPLSVLIWHEVINDTLGGLPIAV TYSPLCNITRVFDRRVGEAVLDFAATGRLRHSCQMLFDRQSESWWEQASARAVSGLYADETLRALPARLESFAAFKARAG EGAMVVIPGQPSKRQYGANPYWGYDRADKPMFSEGPLPDGIAPLARVVAVGERAWALDLLSEKGRIEDGDLVIDWAPGQQ SAVDAPLIAKSHAVGGAIVSRRGADGALSEVEHTVPFAFAFHALHPTATILTRDGR >Mature_375_residues PRFLRTLLGSGALVGLVAGPVAAREAPLVVTTRDASTPVTTRDASMTDPTRDASMNDPTRDASSTKVPYDWTQEFPKADW SRLRIDPAEMASGGPVRGGIPAIDAPTLRAAKAIRPLQIGEAEPVIGVSLNGEMRAYPLSVLIWHEVINDTLGGLPIAVT YSPLCNITRVFDRRVGEAVLDFAATGRLRHSCQMLFDRQSESWWEQASARAVSGLYADETLRALPARLESFAAFKARAGE GAMVVIPGQPSKRQYGANPYWGYDRADKPMFSEGPLPDGIAPLARVVAVGERAWALDLLSEKGRIEDGDLVIDWAPGQQS AVDAPLIAKSHAVGGAIVSRRGADGALSEVEHTVPFAFAFHALHPTATILTRDGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40368; Mature: 40237
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFLRTLLGSGALVGLVAGPVAAREAPLVVTTRDASTPVTTRDASMTDPTRDASMNDPT CCHHHHHHHCCCCEEEHHHCCHHCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCC RDASSTKVPYDWTQEFPKADWSRLRIDPAEMASGGPVRGGIPAIDAPTLRAAKAIRPLQI CCCCCCCCCCHHHHHCCCCCHHHEECCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCC GEAEPVIGVSLNGEMRAYPLSVLIWHEVINDTLGGLPIAVTYSPLCNITRVFDRRVGEAV CCCCCEEEEEECCCCEECHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH LDFAATGRLRHSCQMLFDRQSESWWEQASARAVSGLYADETLRALPARLESFAAFKARAG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGAMVVIPGQPSKRQYGANPYWGYDRADKPMFSEGPLPDGIAPLARVVAVGERAWALDLL CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH SEKGRIEDGDLVIDWAPGQQSAVDAPLIAKSHAVGGAIVSRRGADGALSEVEHTVPFAFA HCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCHHHHCCCCCHHHHHHHHHCCHHHH FHALHPTATILTRDGR HHHHCCCEEEEECCCC >Mature Secondary Structure PRFLRTLLGSGALVGLVAGPVAAREAPLVVTTRDASTPVTTRDASMTDPTRDASMNDPT CHHHHHHHCCCCEEEHHHCCHHCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCC RDASSTKVPYDWTQEFPKADWSRLRIDPAEMASGGPVRGGIPAIDAPTLRAAKAIRPLQI CCCCCCCCCCHHHHHCCCCCHHHEECCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCC GEAEPVIGVSLNGEMRAYPLSVLIWHEVINDTLGGLPIAVTYSPLCNITRVFDRRVGEAV CCCCCEEEEEECCCCEECHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH LDFAATGRLRHSCQMLFDRQSESWWEQASARAVSGLYADETLRALPARLESFAAFKARAG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGAMVVIPGQPSKRQYGANPYWGYDRADKPMFSEGPLPDGIAPLARVVAVGERAWALDLL CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH SEKGRIEDGDLVIDWAPGQQSAVDAPLIAKSHAVGGAIVSRRGADGALSEVEHTVPFAFA HCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCHHHHCCCCCHHHHHHHHHCCHHHH FHALHPTATILTRDGR HHHHCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA