| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593973
Identifier: 83593973
GI number: 83593973
Start: 3070831
End: 3071400
Strand: Reverse
Name: 83593973
Synonym: Rru_A2641
Alternate gene names: NA
Gene position: 3071400-3070831 (Counterclockwise)
Preceding gene: 83593974
Following gene: 83593972
Centisome position: 70.56
GC content: 46.49
Gene sequence:
>570_bases GTGGTGGTGATGTCGAAGGTCTTGCTTAATATCGGATGTGCGGACGTTGATAAGCCTGGTTATATAAATGTTGATGCAAG AAAAACTAAAGTGACTCACTTGGTTAGCAATGCCTGGGATCTTGATTGTTTTGAAGAAAATTCGGTACATGAAATTTATA GCAGGCATATGTTAGAGCATCTTAATCCTGAATACGCAAAATTGGCCCTGCAAAAATGGTTTTATATCTTAGAGCCAGAA GGAAAGCTGGTAGTAATAGTTCCAGACATCGAGTTCCACGCGCGTCAGTTGCTTGGGGTAAGCCGGAGTTCATTTGGTGA TCAGATGGAACATGCTTTTGCCGGCTTCTGGGGCTGGAGGGAAAAAGAACGAGGCGGCAGTGATTTCGATGCCCATCAAT GGGGCTATACGGTCGCGACATTAGAGAACGAAATTGGTGCTGTTGGATTTGAACGGATTGAACGTGTCGTTGAGGGGGTG GATTCCGAGCCCTGGCATTTGCAGATGACCGCTCGAAAGCCAATGACGTCGCTTTGTTGTCCCATGGATTTCAGGGGGCC CTTTCCATAG
Upstream 100 bases:
>100_bases GGGAGCTAAAATTCGTTAAATAAATTTGGATGCGCAGTCACCTTCATAAAAAATGATATCGGTTTCTATTAAATTCATAA AATATTCTCTGTAGTTAAAG
Downstream 100 bases:
>100_bases GGTGGTAATTAACTATAGAAAAAGATGACAATGGATGTGCGTTAAGTCCTGTTTTCGTAATTTCTAAGAGTTAATAGGAA ATTTCTTTAAATAAGGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MVVMSKVLLNIGCADVDKPGYINVDARKTKVTHLVSNAWDLDCFEENSVHEIYSRHMLEHLNPEYAKLALQKWFYILEPE GKLVVIVPDIEFHARQLLGVSRSSFGDQMEHAFAGFWGWREKERGGSDFDAHQWGYTVATLENEIGAVGFERIERVVEGV DSEPWHLQMTARKPMTSLCCPMDFRGPFP
Sequences:
>Translated_189_residues MVVMSKVLLNIGCADVDKPGYINVDARKTKVTHLVSNAWDLDCFEENSVHEIYSRHMLEHLNPEYAKLALQKWFYILEPE GKLVVIVPDIEFHARQLLGVSRSSFGDQMEHAFAGFWGWREKERGGSDFDAHQWGYTVATLENEIGAVGFERIERVVEGV DSEPWHLQMTARKPMTSLCCPMDFRGPFP >Mature_189_residues MVVMSKVLLNIGCADVDKPGYINVDARKTKVTHLVSNAWDLDCFEENSVHEIYSRHMLEHLNPEYAKLALQKWFYILEPE GKLVVIVPDIEFHARQLLGVSRSSFGDQMEHAFAGFWGWREKERGGSDFDAHQWGYTVATLENEIGAVGFERIERVVEGV DSEPWHLQMTARKPMTSLCCPMDFRGPFP
Specific function: Unknown
COG id: COG4627
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21644; Mature: 21644
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVMSKVLLNIGCADVDKPGYINVDARKTKVTHLVSNAWDLDCFEENSVHEIYSRHMLEH CHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LNPEYAKLALQKWFYILEPEGKLVVIVPDIEFHARQLLGVSRSSFGDQMEHAFAGFWGWR CCHHHHHHHHHHHEEEECCCCCEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC EKERGGSDFDAHQWGYTVATLENEIGAVGFERIERVVEGVDSEPWHLQMTARKPMTSLCC HHCCCCCCCCCHHCCEEEEECCCHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHCC PMDFRGPFP CCCCCCCCC >Mature Secondary Structure MVVMSKVLLNIGCADVDKPGYINVDARKTKVTHLVSNAWDLDCFEENSVHEIYSRHMLEH CHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LNPEYAKLALQKWFYILEPEGKLVVIVPDIEFHARQLLGVSRSSFGDQMEHAFAGFWGWR CCHHHHHHHHHHHEEEECCCCCEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC EKERGGSDFDAHQWGYTVATLENEIGAVGFERIERVVEGVDSEPWHLQMTARKPMTSLCC HHCCCCCCCCCHHCCEEEEECCCHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHCC PMDFRGPFP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA