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The map label for this gene is frc [H]

Identifier: 83593885

GI number: 83593885

Start: 2965790

End: 2967016

Strand: Reverse

Name: frc [H]

Synonym: Rru_A2550

Alternate gene names: 83593885

Gene position: 2967016-2965790 (Counterclockwise)

Preceding gene: 83593886

Following gene: 83593881

Centisome position: 68.16

GC content: 69.68

Gene sequence:

>1227_bases
ATGACCGTTTCCCCTCCGCCGCCGCCCGCCGCCCCGGTCCGGCCGCTTGCCGGTTTGCGCGTGCTTGACGCCGCCACCTT
CATCGCCGCCCCCTTCGCCGCCGGCTTGCTTGGCGAATTCGGCGCCGAGGTCATCAAGATCGAACACCCCGCGGGCGGCG
ATCCCTTTCGCCGCTTCGGCACGATGACCGAGCGCGGCGACAGCCTGGCTTGGCTGTCGGAGGGGCGCAACAAGGCCTCT
CTCACCTTGGATCTGCGCAAGCCGCAAGGTGCCGAGGTGTTCCGCAAGCTGGTCGCCGGCGCCGATGTGCTGTGCGAGAA
CTTTCGCCCGGGAACGCTGGAGAAATGGGGGCTGGGCTGGGAGGTTTTATCGGCGATCAACCCCGGCTTGGTGATGCTGC
GGGTGTCGGGCTATGGCCAGGACGGCCCCTATCGCGACTATCCGGGGTTCGCCCGCATCGCCCACGCCTTCGGCGGGCTG
ACCCATCTGGCGGGCCTGCCCGGCGGGCCGCCGGTGACGCCGGGATCAACCTCGCTGGGCGACTATATGAGCGGCCTGTT
TGGCGCCTTTGGCGTGTTGAGCGCCCTGCGTCACCGCGACGCGACCGGGCGCGGCCAGCAGGTCGATATCGCGCTGTATG
AAAGCGTGTTCCGCGTGCTTGATGAACTGGCCCCGGCCTATGCCTATACGGGCGCGGTGCGCGGACCCGAGGGGGCGGGA
ACGCTCAACGCCTGCCCGCACGGCCATTTCCCCTGCGCCAGCGGCGGCTGGGTGGCCATCGCCTGCACCAATGACAAGAT
GTTCGAGCGGCTGGCCCGGGTGATGGGGCGCCCGGCCCTGGCCTCGCCCGAGGTCTGGGGGACGACGGCCCGACGGCTGG
CCGAGCGGGCCGCCGTCGATGCCCTGGTGAGCGCCTGGACGGGGGCTTTGGCGCGGACCGAGGTTCTGGCGTTGTGCCAT
GCCGGCGAGGTGCCCTGCGGCCCGATCAACGCCATCGACGATATCTTCGCCGATCCCCATTTCCAGGCGCGCCAGACGAT
GGTCACGCTGATCGAGGCGCAGCTTGGCGCCATCGTCGTTCCCAATGTTCTGCCCAAGCTTTCCGAAACCCCCGGCCGCA
TCGACCACCTGGGGCCGCGCCTGGGCGCCGATAGCGGGCGGATTCTGGGTGAGCTGGGGCTGAGCGAGGCCGAAATCGCC
GATCTGCGCGCCCAAGGGGTGGTGTGA

Upstream 100 bases:

>100_bases
TCTTGCGCGAAATGGCGGCCCTGGGACTTGTCCTGCCGCGCCTGCTGATCGCCCGCCGCCGCGCCGCTTCGCCCCTTGAC
TTGCCACCGGATGCCCCGTC

Downstream 100 bases:

>100_bases
GGGGGGGAAGGCCGGCGTCAGGCCACCATGTCGTTGAGCAGGCGGCAAACCCCATCGGGATCGGCGACGCGGAAGAAGGC
GTGGCTGGTTCTGCCCCGGC

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MTVSPPPPPAAPVRPLAGLRVLDAATFIAAPFAAGLLGEFGAEVIKIEHPAGGDPFRRFGTMTERGDSLAWLSEGRNKAS
LTLDLRKPQGAEVFRKLVAGADVLCENFRPGTLEKWGLGWEVLSAINPGLVMLRVSGYGQDGPYRDYPGFARIAHAFGGL
THLAGLPGGPPVTPGSTSLGDYMSGLFGAFGVLSALRHRDATGRGQQVDIALYESVFRVLDELAPAYAYTGAVRGPEGAG
TLNACPHGHFPCASGGWVAIACTNDKMFERLARVMGRPALASPEVWGTTARRLAERAAVDALVSAWTGALARTEVLALCH
AGEVPCGPINAIDDIFADPHFQARQTMVTLIEAQLGAIVVPNVLPKLSETPGRIDHLGPRLGADSGRILGELGLSEAEIA
DLRAQGVV

Sequences:

>Translated_408_residues
MTVSPPPPPAAPVRPLAGLRVLDAATFIAAPFAAGLLGEFGAEVIKIEHPAGGDPFRRFGTMTERGDSLAWLSEGRNKAS
LTLDLRKPQGAEVFRKLVAGADVLCENFRPGTLEKWGLGWEVLSAINPGLVMLRVSGYGQDGPYRDYPGFARIAHAFGGL
THLAGLPGGPPVTPGSTSLGDYMSGLFGAFGVLSALRHRDATGRGQQVDIALYESVFRVLDELAPAYAYTGAVRGPEGAG
TLNACPHGHFPCASGGWVAIACTNDKMFERLARVMGRPALASPEVWGTTARRLAERAAVDALVSAWTGALARTEVLALCH
AGEVPCGPINAIDDIFADPHFQARQTMVTLIEAQLGAIVVPNVLPKLSETPGRIDHLGPRLGADSGRILGELGLSEAEIA
DLRAQGVV
>Mature_407_residues
TVSPPPPPAAPVRPLAGLRVLDAATFIAAPFAAGLLGEFGAEVIKIEHPAGGDPFRRFGTMTERGDSLAWLSEGRNKASL
TLDLRKPQGAEVFRKLVAGADVLCENFRPGTLEKWGLGWEVLSAINPGLVMLRVSGYGQDGPYRDYPGFARIAHAFGGLT
HLAGLPGGPPVTPGSTSLGDYMSGLFGAFGVLSALRHRDATGRGQQVDIALYESVFRVLDELAPAYAYTGAVRGPEGAGT
LNACPHGHFPCASGGWVAIACTNDKMFERLARVMGRPALASPEVWGTTARRLAERAAVDALVSAWTGALARTEVLALCHA
GEVPCGPINAIDDIFADPHFQARQTMVTLIEAQLGAIVVPNVLPKLSETPGRIDHLGPRLGADSGRILGELGLSEAEIAD
LRAQGVV

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=404, Percent_Identity=29.4554455445545, Blast_Score=192, Evalue=3e-49,
Organism=Homo sapiens, GI300863124, Length=335, Percent_Identity=30.4477611940298, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI300863126, Length=404, Percent_Identity=27.4752475247525, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI13376042, Length=335, Percent_Identity=26.2686567164179, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI42794625, Length=402, Percent_Identity=27.363184079602, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI266456254, Length=402, Percent_Identity=27.363184079602, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI266458393, Length=268, Percent_Identity=30.9701492537313, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI266458397, Length=261, Percent_Identity=31.0344827586207, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI266458395, Length=129, Percent_Identity=37.984496124031, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI42822893, Length=129, Percent_Identity=37.984496124031, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI87082093, Length=356, Percent_Identity=34.2696629213483, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1788717, Length=419, Percent_Identity=27.4463007159904, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1786222, Length=411, Percent_Identity=29.683698296837, Blast_Score=139, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI32564160, Length=279, Percent_Identity=28.673835125448, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI115535051, Length=267, Percent_Identity=29.2134831460674, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24648431, Length=399, Percent_Identity=31.077694235589, Blast_Score=197, Evalue=7e-51,
Organism=Drosophila melanogaster, GI24585488, Length=402, Percent_Identity=25.8706467661692, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 42847; Mature: 42715

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSPPPPPAAPVRPLAGLRVLDAATFIAAPFAAGLLGEFGAEVIKIEHPAGGDPFRRFG
CCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHC
TMTERGDSLAWLSEGRNKASLTLDLRKPQGAEVFRKLVAGADVLCENFRPGTLEKWGLGW
CHHHCCCCEEHHHCCCCCEEEEEEECCCCHHHHHHHHHHCHHHHHHCCCCCCCHHHCCCH
EVLSAINPGLVMLRVSGYGQDGPYRDYPGFARIAHAFGGLTHLAGLPGGPPVTPGSTSLG
HHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
DYMSGLFGAFGVLSALRHRDATGRGQQVDIALYESVFRVLDELAPAYAYTGAVRGPEGAG
HHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TLNACPHGHFPCASGGWVAIACTNDKMFERLARVMGRPALASPEVWGTTARRLAERAAVD
CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
ALVSAWTGALARTEVLALCHAGEVPCGPINAIDDIFADPHFQARQTMVTLIEAQLGAIVV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEC
PNVLPKLSETPGRIDHLGPRLGADSGRILGELGLSEAEIADLRAQGVV
CHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TVSPPPPPAAPVRPLAGLRVLDAATFIAAPFAAGLLGEFGAEVIKIEHPAGGDPFRRFG
CCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHC
TMTERGDSLAWLSEGRNKASLTLDLRKPQGAEVFRKLVAGADVLCENFRPGTLEKWGLGW
CHHHCCCCEEHHHCCCCCEEEEEEECCCCHHHHHHHHHHCHHHHHHCCCCCCCHHHCCCH
EVLSAINPGLVMLRVSGYGQDGPYRDYPGFARIAHAFGGLTHLAGLPGGPPVTPGSTSLG
HHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
DYMSGLFGAFGVLSALRHRDATGRGQQVDIALYESVFRVLDELAPAYAYTGAVRGPEGAG
HHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TLNACPHGHFPCASGGWVAIACTNDKMFERLARVMGRPALASPEVWGTTARRLAERAAVD
CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
ALVSAWTGALARTEVLALCHAGEVPCGPINAIDDIFADPHFQARQTMVTLIEAQLGAIVV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEC
PNVLPKLSETPGRIDHLGPRLGADSGRILGELGLSEAEIADLRAQGVV
CHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA