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The map label for this gene is aer [C]

Identifier: 83593881

GI number: 83593881

Start: 2959802

End: 2961874

Strand: Reverse

Name: aer [C]

Synonym: Rru_A2546

Alternate gene names: 83593881

Gene position: 2961874-2959802 (Counterclockwise)

Preceding gene: 83593885

Following gene: 83593876

Centisome position: 68.04

GC content: 64.59

Gene sequence:

>2073_bases
ATGGGCATTCTGTTTGGGACCATTCGGAAGCAAATCCTGATCCCGCTGGTTGGGGTTATTACGATCGGCATGGTGGCGAT
CACCTTTTACGCTTCGATTGTCCAATTCGATGCCGCCCGGGAGGCTGGCTATCAAGTCATGCTCGAGCAATCGCGGGCCG
AGGCCAATACGGTCAGCCATCTTTTGGATGAGGCCTTGACCACCGTTCGGACCAATGCCGATTGGGCGCGATCTTTCGCT
TTGGGCGACTCCTTTGATCGCCAGGGGTTCGCCCAGGCGCTGCTCCAGGTCTTGCGCAGTTCTCCGGCCTTGACCGGTGT
CTACGCGGGGTTCGAGCCGAACTTCGATGGTCGGGATGCCGATCATGCCAAAACGGCCCTCGGCGATGACACGGGCCGGT
TCCTGATCTATGCCTATCGCGCCAACGACACGGAAACCCTGGCCATCACGCCGCTGACCGGCGATCCGGCGGAAGAGAAC
TGGTATTATCGGCCGTTGCGCGACAAGCGCGAGTCCATCACCCCTCCCTATGAGTTCGAGGTCGATGGGCATCGCTTCCT
GATGTCGACGGTGGTCGTTCCCATCCTCAAGGACGGCAAGGCCCTGGGCGTGGCCACGGCCGATGTCGGGCTTGATCGCA
TCGCCCAGGAGGTGTCCCGTCTCAAGCCGATGGGCGTGGGTTATGCGGTGGTGGTGTCGGCCGATGGTCAATGGGTGGCC
GCCCCGCGGCCGGAGCTTTTGGGAAAGCCGGTCGACGACCCGGCGTTTCGCGAGGCTTTGGACAAGATCAAAGACGCCGA
GGTCCAAAAGACGGTTTTCACCGATTCCCTGACCGGGGAGAAATCGGTGATGGTGATGGTGCCCATTCGCATCGGCCGCG
CCGCCGAGACCTGGGGCATCGCCATGGTCGTGCCCGAGGCCGCCCTTCTCGCCGAGGCCTCGGCCGCGCGGATCCGCCTG
ATCCTGGTGGGGCTGGGGATTTTGCTGGCGGCGGCGCTGACGGCGGTTCTGGTTGGCAACGCCATCGTCCGACCGGTGCG
CGATATGACCCAGGCCATGACGCGGCTGGCCGAGGGGGCCCTGGGGGTGAGCGTGCCCGGAACCGATCGCCGCGACGAGA
TCGGCGCCATGTCCAAGGCGGTGAGGATCTTCAAGGATAACGCCGCCGCCATGCTGGAGATGAGCCGCAAGTCGGAAAGC
CTTGAGCGCGAGGCCCAGGAAAGCCGGCGGCAGGCGCAAGCGCGTTTGGCCGACCGCTTCGAAGGCGAGGTCGCCGCGAT
GATCCATGTTCTTGGCGAGGCCGCTTCCGGCTTGCGCGAGCAGGCCCAGATCATGACCGATACCGCCCAGACGGTGGCGA
CCCATGCCGCCACCGTCGACGCCGCCGCCGGCCAGACTTCGGCCAATGTTCAGACCGTCGCCTCGGCCAGCGAGGAATTG
GCCTCTTCCATCGGCGAAATCAGCCGTCAGGTCGGTCAATCAAGCAGCGTCGCCGCCGATGCGGTTCGTCAGGTCGAACA
GAGCCAGCAGACCATCGTGGCGCTGGAGCGATCCGCCCTGCGGATCGGCGAGGTGGTGACCTTGATCAATACCATCGCCA
GCCAGACCAATCTTCTGGCGCTGAATGCGACGATCGAGGCGGCGCGGGCCGGCGATGCCGGCAAGGGCTTCGCCGTGGTC
GCCGGCGAGGTCAAGGCCCTGGCCAATCAAACGGCGCGGGCCACCGAGGAAATCGTCGGTCAGATCGGATCTGTTCAGGC
GGGCACCCGCGATGTCGTCGCCGCGATCTCGATGATCTCGACGACGATCGAATCCATGAGCCAGATTTCGACCCAGATCG
CCGGAGCCGTCGAGGAACAGGCCGCCGCCACCCAGGAAATCACCCGCTCGGTGCAGCAGGTCGCCCAAGGCACGCAAACG
GTGACCGAGGCCATCTCGGATGTTTACTCGGGCACCGTGAAGAATGGCGACCACGCCCGGGTGGTCCATCGCACCGCCGA
ACAAGTGGCCGAGGACGCCAAGGGGCTTGCCCACAAGGTGAACGACTTTCTGGCCGATATCCGGGGCGGGTGA

Upstream 100 bases:

>100_bases
GGCTTTGGGTGGGTGCAATCAAGGCGTGATCTTCTAATACAACAGCTTCTCTGGTTGATCAAACGATCTGCCAAGGCCCT
TCTCTATAAATAGGCGTGAT

Downstream 100 bases:

>100_bases
CGGCGGGAGAGAAGAGTCGCCCCGCCGCGTCCTGTTTGCTCGCCCGTCACTTCAGAAGAACATATACCCCATAAAGCGCC
AGCAGCGCCGCGGCGCCCAC

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 690; Mature: 689

Protein sequence:

>690_residues
MGILFGTIRKQILIPLVGVITIGMVAITFYASIVQFDAAREAGYQVMLEQSRAEANTVSHLLDEALTTVRTNADWARSFA
LGDSFDRQGFAQALLQVLRSSPALTGVYAGFEPNFDGRDADHAKTALGDDTGRFLIYAYRANDTETLAITPLTGDPAEEN
WYYRPLRDKRESITPPYEFEVDGHRFLMSTVVVPILKDGKALGVATADVGLDRIAQEVSRLKPMGVGYAVVVSADGQWVA
APRPELLGKPVDDPAFREALDKIKDAEVQKTVFTDSLTGEKSVMVMVPIRIGRAAETWGIAMVVPEAALLAEASAARIRL
ILVGLGILLAAALTAVLVGNAIVRPVRDMTQAMTRLAEGALGVSVPGTDRRDEIGAMSKAVRIFKDNAAAMLEMSRKSES
LEREAQESRRQAQARLADRFEGEVAAMIHVLGEAASGLREQAQIMTDTAQTVATHAATVDAAAGQTSANVQTVASASEEL
ASSIGEISRQVGQSSSVAADAVRQVEQSQQTIVALERSALRIGEVVTLINTIASQTNLLALNATIEAARAGDAGKGFAVV
AGEVKALANQTARATEEIVGQIGSVQAGTRDVVAAISMISTTIESMSQISTQIAGAVEEQAAATQEITRSVQQVAQGTQT
VTEAISDVYSGTVKNGDHARVVHRTAEQVAEDAKGLAHKVNDFLADIRGG

Sequences:

>Translated_690_residues
MGILFGTIRKQILIPLVGVITIGMVAITFYASIVQFDAAREAGYQVMLEQSRAEANTVSHLLDEALTTVRTNADWARSFA
LGDSFDRQGFAQALLQVLRSSPALTGVYAGFEPNFDGRDADHAKTALGDDTGRFLIYAYRANDTETLAITPLTGDPAEEN
WYYRPLRDKRESITPPYEFEVDGHRFLMSTVVVPILKDGKALGVATADVGLDRIAQEVSRLKPMGVGYAVVVSADGQWVA
APRPELLGKPVDDPAFREALDKIKDAEVQKTVFTDSLTGEKSVMVMVPIRIGRAAETWGIAMVVPEAALLAEASAARIRL
ILVGLGILLAAALTAVLVGNAIVRPVRDMTQAMTRLAEGALGVSVPGTDRRDEIGAMSKAVRIFKDNAAAMLEMSRKSES
LEREAQESRRQAQARLADRFEGEVAAMIHVLGEAASGLREQAQIMTDTAQTVATHAATVDAAAGQTSANVQTVASASEEL
ASSIGEISRQVGQSSSVAADAVRQVEQSQQTIVALERSALRIGEVVTLINTIASQTNLLALNATIEAARAGDAGKGFAVV
AGEVKALANQTARATEEIVGQIGSVQAGTRDVVAAISMISTTIESMSQISTQIAGAVEEQAAATQEITRSVQQVAQGTQT
VTEAISDVYSGTVKNGDHARVVHRTAEQVAEDAKGLAHKVNDFLADIRGG
>Mature_689_residues
GILFGTIRKQILIPLVGVITIGMVAITFYASIVQFDAAREAGYQVMLEQSRAEANTVSHLLDEALTTVRTNADWARSFAL
GDSFDRQGFAQALLQVLRSSPALTGVYAGFEPNFDGRDADHAKTALGDDTGRFLIYAYRANDTETLAITPLTGDPAEENW
YYRPLRDKRESITPPYEFEVDGHRFLMSTVVVPILKDGKALGVATADVGLDRIAQEVSRLKPMGVGYAVVVSADGQWVAA
PRPELLGKPVDDPAFREALDKIKDAEVQKTVFTDSLTGEKSVMVMVPIRIGRAAETWGIAMVVPEAALLAEASAARIRLI
LVGLGILLAAALTAVLVGNAIVRPVRDMTQAMTRLAEGALGVSVPGTDRRDEIGAMSKAVRIFKDNAAAMLEMSRKSESL
EREAQESRRQAQARLADRFEGEVAAMIHVLGEAASGLREQAQIMTDTAQTVATHAATVDAAAGQTSANVQTVASASEELA
SSIGEISRQVGQSSSVAADAVRQVEQSQQTIVALERSALRIGEVVTLINTIASQTNLLALNATIEAARAGDAGKGFAVVA
GEVKALANQTARATEEIVGQIGSVQAGTRDVVAAISMISTTIESMSQISTQIAGAVEEQAAATQEITRSVQQVAQGTQTV
TEAISDVYSGTVKNGDHARVVHRTAEQVAEDAKGLAHKVNDFLADIRGG

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=361, Percent_Identity=29.9168975069252, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1788194, Length=189, Percent_Identity=37.037037037037, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1787690, Length=235, Percent_Identity=29.7872340425532, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1788195, Length=237, Percent_Identity=34.5991561181435, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI2367378, Length=338, Percent_Identity=27.5147928994083, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 73207; Mature: 73076

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILFGTIRKQILIPLVGVITIGMVAITFYASIVQFDAAREAGYQVMLEQSRAEANTVSH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LLDEALTTVRTNADWARSFALGDSFDRQGFAQALLQVLRSSPALTGVYAGFEPNFDGRDA
HHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
DHAKTALGDDTGRFLIYAYRANDTETLAITPLTGDPAEENWYYRPLRDKRESITPPYEFE
HHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCEECCCHHHHHCCCCCEEEE
VDGHRFLMSTVVVPILKDGKALGVATADVGLDRIAQEVSRLKPMGVGYAVVVSADGQWVA
ECCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
APRPELLGKPVDDPAFREALDKIKDAEVQKTVFTDSLTGEKSVMVMVPIRIGRAAETWGI
CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHCCE
AMVVPEAALLAEASAARIRLILVGLGILLAAALTAVLVGNAIVRPVRDMTQAMTRLAEGA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LGVSVPGTDRRDEIGAMSKAVRIFKDNAAAMLEMSRKSESLEREAQESRRQAQARLADRF
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGEVAAMIHVLGEAASGLREQAQIMTDTAQTVATHAATVDAAAGQTSANVQTVASASEEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ASSIGEISRQVGQSSSVAADAVRQVEQSQQTIVALERSALRIGEVVTLINTIASQTNLLA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LNATIEAARAGDAGKGFAVVAGEVKALANQTARATEEIVGQIGSVQAGTRDVVAAISMIS
EECHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TTIESMSQISTQIAGAVEEQAAATQEITRSVQQVAQGTQTVTEAISDVYSGTVKNGDHAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
VVHRTAEQVAEDAKGLAHKVNDFLADIRGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GILFGTIRKQILIPLVGVITIGMVAITFYASIVQFDAAREAGYQVMLEQSRAEANTVSH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LLDEALTTVRTNADWARSFALGDSFDRQGFAQALLQVLRSSPALTGVYAGFEPNFDGRDA
HHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
DHAKTALGDDTGRFLIYAYRANDTETLAITPLTGDPAEENWYYRPLRDKRESITPPYEFE
HHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCEECCCHHHHHCCCCCEEEE
VDGHRFLMSTVVVPILKDGKALGVATADVGLDRIAQEVSRLKPMGVGYAVVVSADGQWVA
ECCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
APRPELLGKPVDDPAFREALDKIKDAEVQKTVFTDSLTGEKSVMVMVPIRIGRAAETWGI
CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHCCE
AMVVPEAALLAEASAARIRLILVGLGILLAAALTAVLVGNAIVRPVRDMTQAMTRLAEGA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LGVSVPGTDRRDEIGAMSKAVRIFKDNAAAMLEMSRKSESLEREAQESRRQAQARLADRF
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGEVAAMIHVLGEAASGLREQAQIMTDTAQTVATHAATVDAAAGQTSANVQTVASASEEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ASSIGEISRQVGQSSSVAADAVRQVEQSQQTIVALERSALRIGEVVTLINTIASQTNLLA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LNATIEAARAGDAGKGFAVVAGEVKALANQTARATEEIVGQIGSVQAGTRDVVAAISMIS
EECHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TTIESMSQISTQIAGAVEEQAAATQEITRSVQQVAQGTQTVTEAISDVYSGTVKNGDHAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
VVHRTAEQVAEDAKGLAHKVNDFLADIRGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]