| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is argC
Identifier: 83593756
GI number: 83593756
Start: 2820294
End: 2821352
Strand: Reverse
Name: argC
Synonym: Rru_A2421
Alternate gene names: 83593756
Gene position: 2821352-2820294 (Counterclockwise)
Preceding gene: 83593758
Following gene: 83593755
Centisome position: 64.82
GC content: 66.19
Gene sequence:
>1059_bases ATGAGCGAACGGGTCAATGTCGCCATCCTCGGGGCCAGCGGCTATACGGGCGCCGAACTCGTTCGCCTGCTCGCCCGCCA TCCGCGCGTGACCCTGGCGGCGCTGACCGCCAACCGCAAGGCCGGCCAAGCCTTCGCCTCGGTCTTTCCCCATCTTGGCG GGCTCGATCTGCCGGTTTTGTCGACCATCGAGGCGGTCGACTGGTCGGCGATCGATTTCGTCTTTTGCGCCCTACCCCAT GGCACGACGCAGACCATCATCGGCGATCTGCTGAACGGCCCCCACGGCGGGCGGCTGCGCATCGCCGATTTGTCGGCCGA TTTCCGGCTGGCCGATCCAATGGTCTATCAAACCTGGTACGGCCATGCCCATGAGGCGGTCGAGCTTCAGAAGGAGGCCG TTTACGGCCTGACCGAGATCAATCGCGCCGCCATCGCCACGGCCCGATTGGTGGCGGTGCCCGGCTGCTATCCGACCAGC GCCCAATTGCCGCTGATCCCGCTGCTGCGCGCCGGCCTGATCGATCCCGACGCCATCATCATCGATGCCAAATCCGGCGC CTCGGGGGCGGGGCGCGACGCCAAGGAAGGCTCGCTCCATTGCGAGGTGTCCGAGGGCATCCACGCCTATGGGGTGGGCA CCCATCGCCATGGCCCCGAGATCGAGCAGGGTCTGAGTCTGGCCGTCGGGCGGCCGGTGGCGGTGACTTTCACCCCCCAT CTGATGCCGATGAACCGGGGTATCTTAAGCACCATCTATCTGCGTGCCACCGCCGGCAATGACGCCACCACCCTGCGTCA GGCGCTGAGCGCGGCCTATGCCGACGAGGCCTTCGTGCGGGTGGTGCCCGAAGGGGTGTCGCCCCATACCCGTCATGTGC GCGGGTCGAATTTCGTGCTGATCGGCGTTCACGCCGACCGGGTGCCCGGCCGGGTGATCGTGACCTGCGTCGAGGATAAT CTGGTCAAGGGCGCCTCGGGTCAGGCGATCCAGGATATGAACGTCATGCTGGGCTTCCCCGAAACCCTGGGGCTTGATCA GCAGCCGCTGTTTCCCTGA
Upstream 100 bases:
>100_bases TGGGGGCGATGTATCCAATCTTTCCGGCCATTTTCATGTTTTCGCCGGCCGATCAAGACCGGCGCCGGGAATTTTTCCCT ATCTTACAAGGATCTTGGTT
Downstream 100 bases:
>100_bases GCGACATAAGGGGCGTCCGTCGGGCGCCCCTTTTTCATTGAAGAAAGGGTCGCGACCATGTCCGCCTCCGAGCCTCCCGC CGTTCCCTTGGGCACTCCCG
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSERVNVAILGASGYTGAELVRLLARHPRVTLAALTANRKAGQAFASVFPHLGGLDLPVLSTIEAVDWSAIDFVFCALPH GTTQTIIGDLLNGPHGGRLRIADLSADFRLADPMVYQTWYGHAHEAVELQKEAVYGLTEINRAAIATARLVAVPGCYPTS AQLPLIPLLRAGLIDPDAIIIDAKSGASGAGRDAKEGSLHCEVSEGIHAYGVGTHRHGPEIEQGLSLAVGRPVAVTFTPH LMPMNRGILSTIYLRATAGNDATTLRQALSAAYADEAFVRVVPEGVSPHTRHVRGSNFVLIGVHADRVPGRVIVTCVEDN LVKGASGQAIQDMNVMLGFPETLGLDQQPLFP
Sequences:
>Translated_352_residues MSERVNVAILGASGYTGAELVRLLARHPRVTLAALTANRKAGQAFASVFPHLGGLDLPVLSTIEAVDWSAIDFVFCALPH GTTQTIIGDLLNGPHGGRLRIADLSADFRLADPMVYQTWYGHAHEAVELQKEAVYGLTEINRAAIATARLVAVPGCYPTS AQLPLIPLLRAGLIDPDAIIIDAKSGASGAGRDAKEGSLHCEVSEGIHAYGVGTHRHGPEIEQGLSLAVGRPVAVTFTPH LMPMNRGILSTIYLRATAGNDATTLRQALSAAYADEAFVRVVPEGVSPHTRHVRGSNFVLIGVHADRVPGRVIVTCVEDN LVKGASGQAIQDMNVMLGFPETLGLDQQPLFP >Mature_351_residues SERVNVAILGASGYTGAELVRLLARHPRVTLAALTANRKAGQAFASVFPHLGGLDLPVLSTIEAVDWSAIDFVFCALPHG TTQTIIGDLLNGPHGGRLRIADLSADFRLADPMVYQTWYGHAHEAVELQKEAVYGLTEINRAAIATARLVAVPGCYPTSA QLPLIPLLRAGLIDPDAIIIDAKSGASGAGRDAKEGSLHCEVSEGIHAYGVGTHRHGPEIEQGLSLAVGRPVAVTFTPHL MPMNRGILSTIYLRATAGNDATTLRQALSAAYADEAFVRVVPEGVSPHTRHVRGSNFVLIGVHADRVPGRVIVTCVEDNL VKGASGQAIQDMNVMLGFPETLGLDQQPLFP
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=348, Percent_Identity=40.5172413793103, Blast_Score=207, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6320913, Length=355, Percent_Identity=29.2957746478873, Blast_Score=111, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_RHORT (Q2RRM4)
Other databases:
- EMBL: CP000230 - RefSeq: YP_427508.1 - HSSP: Q8ZKL8 - ProteinModelPortal: Q2RRM4 - SMR: Q2RRM4 - STRING: Q2RRM4 - GeneID: 3835855 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A2421 - NMPDR: fig|1085.1.peg.70 - eggNOG: COG0002 - HOGENOM: HBG294213 - OMA: VCRIAVH - PhylomeDB: Q2RRM4 - ProtClustDB: PRK00436 - BioCyc: RRUB269796:RRU_A2421-MONOMER - GO: GO:0005737 - HAMAP: MF_00150 - InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01850
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC
EC number: =1.2.1.38
Molecular weight: Translated: 37298; Mature: 37167
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS01224 ARGC
Important sites: ACT_SITE 156-156
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERVNVAILGASGYTGAELVRLLARHPRVTLAALTANRKAGQAFASVFPHLGGLDLPVL CCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHH STIEAVDWSAIDFVFCALPHGTTQTIIGDLLNGPHGGRLRIADLSADFRLADPMVYQTWY HHHHHCCCCHHEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEECCCEEEEHHC GHAHEAVELQKEAVYGLTEINRAAIATARLVAVPGCYPTSAQLPLIPLLRAGLIDPDAII CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEE IDAKSGASGAGRDAKEGSLHCEVSEGIHAYGVGTHRHGPEIEQGLSLAVGRPVAVTFTPH EECCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHCCEEECCCCEEEEECCC LMPMNRGILSTIYLRATAGNDATTLRQALSAAYADEAFVRVVPEGVSPHTRHVRGSNFVL CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCEEE IGVHADRVPGRVIVTCVEDNLVKGASGQAIQDMNVMLGFPETLGLDQQPLFP EEEECCCCCCEEEEEEECCCCCCCCCCCEEECCCEEEECHHHCCCCCCCCCC >Mature Secondary Structure SERVNVAILGASGYTGAELVRLLARHPRVTLAALTANRKAGQAFASVFPHLGGLDLPVL CCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHH STIEAVDWSAIDFVFCALPHGTTQTIIGDLLNGPHGGRLRIADLSADFRLADPMVYQTWY HHHHHCCCCHHEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEECCCEEEEHHC GHAHEAVELQKEAVYGLTEINRAAIATARLVAVPGCYPTSAQLPLIPLLRAGLIDPDAII CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEE IDAKSGASGAGRDAKEGSLHCEVSEGIHAYGVGTHRHGPEIEQGLSLAVGRPVAVTFTPH EECCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHCCEEECCCCEEEEECCC LMPMNRGILSTIYLRATAGNDATTLRQALSAAYADEAFVRVVPEGVSPHTRHVRGSNFVL CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCEEE IGVHADRVPGRVIVTCVEDNLVKGASGQAIQDMNVMLGFPETLGLDQQPLFP EEEECCCCCCEEEEEEECCCCCCCCCCCEEECCCEEEECHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA