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The map label for this gene is ybhP [H]

Identifier: 83593698

GI number: 83593698

Start: 2753534

End: 2754301

Strand: Reverse

Name: ybhP [H]

Synonym: Rru_A2363

Alternate gene names: 83593698

Gene position: 2754301-2753534 (Counterclockwise)

Preceding gene: 83593699

Following gene: 83593697

Centisome position: 63.28

GC content: 65.49

Gene sequence:

>768_bases
GTGACCCTTACCAAGATCACGGCCGGCAAGGACGATCCCGACACCGGCTTCGCCATCGCCACCTATAACATTCATTCCTG
TCTGGGGACGGATGGCGCCTTCCGTCCCGATCGGGTGGCCCAGGCGATCCGCGCCCTTGATGCCGATGTGATCGGCCTGC
AGGAAGTGGGATGGGCCCTGCGCGGCCCCAGTGGCTTTGACCAGTTCGCCTTTCTGGAACGCGAAACCGGCTATACGGTG
ATCCCCGGGCTGGTCCGTCACCATGCCAACGCCCATTTCGGCAATGCTATCTTGTCGCGCCATCCCGTTGAATCGGTGGC
GCCCCTTGACCTCAGCCTGCCCTATCACTCGCCGCGCGGCGGTATCGATGCGCGCATCCGCGTCAAGGGGCGGTCGGTGC
GGCTGATCAATGTCCACCTGGGGCTGATCCCTTTGGAGCGCCGCATCCAGATCCGGCGGATCGGCCTGCGGCTGCTGGAC
GGCTGGCGTGGTCCGGCGCTGGTTTGCGGCGATCTCAATCATTGGCGGCGGACCAGCCCGGCCATGCAGCGCCTGCACCG
CCTGTTGCCCGGCGGGGTGACCGGCCAGACCTACCCTTCGGCCCTGCCGACGATGATGTTCGACCGCATCCTGGCCACCG
GCGATCTGCATCTGGAAAACCATCAGGTGATCCGCACCGAAGGAACGCGCGTCGCCAGCGATCACCTGCCTTTGATGGCC
TGGTTCCGCTTCGAGGGCGCCGACGTCTTGTCCGAGGATGCCGCCTAA

Upstream 100 bases:

>100_bases
GTAAAGGCGATCCGGTAACGCGGATCATTTGATCTGAACTCGATAAAAAAGCAGAGCGTTGTTCTCCACGATCCTCCATG
GTTTTTCCGGGGCAGAGCGG

Downstream 100 bases:

>100_bases
CCCCATGTTGAGGAAAGCCGCTCGGCCCCACCCGCTTTCGAGGAGAGCTTTCACCATGGCTACCGCAACCTTCGCCGCCG
GCTGCTTCTGGGGCGTGGAA

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTLTKITAGKDDPDTGFAIATYNIHSCLGTDGAFRPDRVAQAIRALDADVIGLQEVGWALRGPSGFDQFAFLERETGYTV
IPGLVRHHANAHFGNAILSRHPVESVAPLDLSLPYHSPRGGIDARIRVKGRSVRLINVHLGLIPLERRIQIRRIGLRLLD
GWRGPALVCGDLNHWRRTSPAMQRLHRLLPGGVTGQTYPSALPTMMFDRILATGDLHLENHQVIRTEGTRVASDHLPLMA
WFRFEGADVLSEDAA

Sequences:

>Translated_255_residues
MTLTKITAGKDDPDTGFAIATYNIHSCLGTDGAFRPDRVAQAIRALDADVIGLQEVGWALRGPSGFDQFAFLERETGYTV
IPGLVRHHANAHFGNAILSRHPVESVAPLDLSLPYHSPRGGIDARIRVKGRSVRLINVHLGLIPLERRIQIRRIGLRLLD
GWRGPALVCGDLNHWRRTSPAMQRLHRLLPGGVTGQTYPSALPTMMFDRILATGDLHLENHQVIRTEGTRVASDHLPLMA
WFRFEGADVLSEDAA
>Mature_254_residues
TLTKITAGKDDPDTGFAIATYNIHSCLGTDGAFRPDRVAQAIRALDADVIGLQEVGWALRGPSGFDQFAFLERETGYTVI
PGLVRHHANAHFGNAILSRHPVESVAPLDLSLPYHSPRGGIDARIRVKGRSVRLINVHLGLIPLERRIQIRRIGLRLLDG
WRGPALVCGDLNHWRRTSPAMQRLHRLLPGGVTGQTYPSALPTMMFDRILATGDLHLENHQVIRTEGTRVASDHLPLMAW
FRFEGADVLSEDAA

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=244, Percent_Identity=27.4590163934426, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 28150; Mature: 28019

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTKITAGKDDPDTGFAIATYNIHSCLGTDGAFRPDRVAQAIRALDADVIGLQEVGWAL
CCEEEEECCCCCCCCCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCEE
RGPSGFDQFAFLERETGYTVIPGLVRHHANAHFGNAILSRHPVESVAPLDLSLPYHSPRG
CCCCCCCHHEEEECCCCCEECCHHHHHCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCC
GIDARIRVKGRSVRLINVHLGLIPLERRIQIRRIGLRLLDGWRGPALVCGDLNHWRRTSP
CCCEEEEEECCEEEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCH
AMQRLHRLLPGGVTGQTYPSALPTMMFDRILATGDLHLENHQVIRTEGTRVASDHLPLMA
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEEEECCCEEECCCCCEEE
WFRFEGADVLSEDAA
EEEECCCCHHCCCCC
>Mature Secondary Structure 
TLTKITAGKDDPDTGFAIATYNIHSCLGTDGAFRPDRVAQAIRALDADVIGLQEVGWAL
CEEEEECCCCCCCCCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCEE
RGPSGFDQFAFLERETGYTVIPGLVRHHANAHFGNAILSRHPVESVAPLDLSLPYHSPRG
CCCCCCCHHEEEECCCCCEECCHHHHHCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCC
GIDARIRVKGRSVRLINVHLGLIPLERRIQIRRIGLRLLDGWRGPALVCGDLNHWRRTSP
CCCEEEEEECCEEEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCH
AMQRLHRLLPGGVTGQTYPSALPTMMFDRILATGDLHLENHQVIRTEGTRVASDHLPLMA
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEEEECCCEEECCCCCEEE
WFRFEGADVLSEDAA
EEEECCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]