| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yccV [C]
Identifier: 83593699
GI number: 83593699
Start: 2754413
End: 2754742
Strand: Reverse
Name: yccV [C]
Synonym: Rru_A2364
Alternate gene names: 83593699
Gene position: 2754742-2754413 (Counterclockwise)
Preceding gene: 83593704
Following gene: 83593698
Centisome position: 63.29
GC content: 56.06
Gene sequence:
>330_bases ATGGCCATGCGTGTCGCCAAATATCGGATTGGTCAAGTGGTGCGCCATCGGGTTTATCCCTTTCGCGGCGTGATCTTCGA TGTCGATCCGGTTTTCAACAATACCGAGGAATGGTACGATGCCATCCCGGAGGATATTCGGCCCGCCCGGGATCAGCCGT TCTATCACCTTCTCGCCGAGAATGGTGAAAGCACATATACCGCTTACGTTTCGGAACAAAACCTGCTTGCCGAGGACAAT CCCCGGCCGGTTCAGCACCCGGAATTGGCCGAAATGTTCGACGCCCGCAAAGATGGGGTCTACATTAGCCGCACCCTGCG GCCCCATTAG
Upstream 100 bases:
>100_bases AGCCACCGGGTGAGAGTGGCGGTGCGGAGCGGGGGTATCGCCGGGAAGTCGTCAGCGGCTTTGGCGGTTAGCGCTCCAGG ATAAAGGGCGGGTTTATCCC
Downstream 100 bases:
>100_bases ATCAAACCGGGGTAAAGGCGATCCGGTAACGCGGATCATTTGATCTGAACTCGATAAAAAAGCAGAGCGTTGTTCTCCAC GATCCTCCATGGTTTTTCCG
Product: hemimethylated DNA-binding region
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MAMRVAKYRIGQVVRHRVYPFRGVIFDVDPVFNNTEEWYDAIPEDIRPARDQPFYHLLAENGESTYTAYVSEQNLLAEDN PRPVQHPELAEMFDARKDGVYISRTLRPH
Sequences:
>Translated_109_residues MAMRVAKYRIGQVVRHRVYPFRGVIFDVDPVFNNTEEWYDAIPEDIRPARDQPFYHLLAENGESTYTAYVSEQNLLAEDN PRPVQHPELAEMFDARKDGVYISRTLRPH >Mature_108_residues AMRVAKYRIGQVVRHRVYPFRGVIFDVDPVFNNTEEWYDAIPEDIRPARDQPFYHLLAENGESTYTAYVSEQNLLAEDNP RPVQHPELAEMFDARKDGVYISRTLRPH
Specific function: Unknown
COG id: COG3785
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12809; Mature: 12677
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMRVAKYRIGQVVRHRVYPFRGVIFDVDPVFNNTEEWYDAIPEDIRPARDQPFYHLLAE CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHCCCHHCCCCCCCCEEEEEEC NGESTYTAYVSEQNLLAEDNPRPVQHPELAEMFDARKDGVYISRTLRPH CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCC >Mature Secondary Structure AMRVAKYRIGQVVRHRVYPFRGVIFDVDPVFNNTEEWYDAIPEDIRPARDQPFYHLLAE CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHCCCHHCCCCCCCCEEEEEEC NGESTYTAYVSEQNLLAEDNPRPVQHPELAEMFDARKDGVYISRTLRPH CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA