Click here to switch to the map view.

The map label for this gene is 83593463

Identifier: 83593463

GI number: 83593463

Start: 2470645

End: 2471568

Strand: Direct

Name: 83593463

Synonym: Rru_A2128

Alternate gene names: NA

Gene position: 2470645-2471568 (Clockwise)

Preceding gene: 83593462

Following gene: 83593464

Centisome position: 56.76

GC content: 71.86

Gene sequence:

>924_bases
ATGCCGGACACGCCCCTCCTCGCCTCTTCACAACCGGCCGCCGGGCGACGGGCGCTTGGCCTGTCGGCCCGGCTGGCCTT
TGCCGCTCTCGCCGGCGGAGGGGGGCTGGCCTGGATCGATCGCGGGGACACGGCGCTATGGCTGATCGCCCCGGCCCTGC
TATGGCTTCAAGTTCTGCTGACCCTGGCCGGGGTACTGGCCTTGGCCGGGGGAAGCCGCCTGCCCGGGGCGTTGATCGTC
GCCTTAAGCGCCGGTTTGCTGGTGCCGCCGCTGACGGTGGAAATGCGGCTGCTCGGCTTTTTCCTGGCCGCGCCGCCGCC
CGACCAATCGATCCTGACGACGGCCCAATACACCCTGGCCGGCGCCCTAGCGGCCGGCGCCCTGGCCTGGATCCTGGCTA
GGCGGCGTTTTGGCCGGCCGCCATGTAGTTGGACCATGCTCGATTGCGGCGGCCCCGGGGCCGAGATCGATATGGATGCC
GCCCTGGCCAGCCTGAGCGCGGAAACCCTGCGCCGGCGCGATCGCGCCTATATCGACGCGCCGCCGCCCCTGCCCTTCGC
CCCGCGAGGGCCGCCCCGTCCCCCTCCCCCCACACTCGGCGGTCCGCGCCTGAAGCGCATGCCCGCCGGGTTGGGCGGCG
CCATCTTGTGCCTGGAAAGCGACGATCACACCTTGCGGGTTCACACCACCCAGGGCAGCGGCACCCTGGCCGGCCGCCTG
GGCGACGCGGCGCTCGATCTGGGCGAAAGCGCCGGCTTGCGGGTTCACCGGTCGTGGTGGGTGGCGCGCGAGGCGGTGAG
CGCCATCGAACGCGACGGCCGACGGATGCGGCTGATCTTGCTCAATGGCATGGACGTGCCGGTCAGCCGCGCCCATCAGC
CCAAGGTCTTGGCCGGCCCTTGGCCCAATCTGCGGGTTTCCTGA

Upstream 100 bases:

>100_bases
CACCCTGGAAATCATGCCCGTCGCCCAGGCCTGGGCCGGCTTCGCCGTCCACCGCCGCCCCGCCGCCGAGTAGGCGGCCC
ACCCTTCGTCCGCCCCCGCG

Downstream 100 bases:

>100_bases
TCTTTCCCCGGCCGCCGCTCCGCCTCATATTCACAGGCACCCGCGCCGACGATCGAAGGATCCCCGCCCATGCCCGCGTC
GCCTCCCCCGCCCGCCCCCG

Product: LytR/AlgR family transcriptional regulator

Products: NA

Alternate protein names: LytR/AlgR-Family Transcriptional Regulator; LytR/AlgR Family Transcriptional Regulator

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MPDTPLLASSQPAAGRRALGLSARLAFAALAGGGGLAWIDRGDTALWLIAPALLWLQVLLTLAGVLALAGGSRLPGALIV
ALSAGLLVPPLTVEMRLLGFFLAAPPPDQSILTTAQYTLAGALAAGALAWILARRRFGRPPCSWTMLDCGGPGAEIDMDA
ALASLSAETLRRRDRAYIDAPPPLPFAPRGPPRPPPPTLGGPRLKRMPAGLGGAILCLESDDHTLRVHTTQGSGTLAGRL
GDAALDLGESAGLRVHRSWWVAREAVSAIERDGRRMRLILLNGMDVPVSRAHQPKVLAGPWPNLRVS

Sequences:

>Translated_307_residues
MPDTPLLASSQPAAGRRALGLSARLAFAALAGGGGLAWIDRGDTALWLIAPALLWLQVLLTLAGVLALAGGSRLPGALIV
ALSAGLLVPPLTVEMRLLGFFLAAPPPDQSILTTAQYTLAGALAAGALAWILARRRFGRPPCSWTMLDCGGPGAEIDMDA
ALASLSAETLRRRDRAYIDAPPPLPFAPRGPPRPPPPTLGGPRLKRMPAGLGGAILCLESDDHTLRVHTTQGSGTLAGRL
GDAALDLGESAGLRVHRSWWVAREAVSAIERDGRRMRLILLNGMDVPVSRAHQPKVLAGPWPNLRVS
>Mature_306_residues
PDTPLLASSQPAAGRRALGLSARLAFAALAGGGGLAWIDRGDTALWLIAPALLWLQVLLTLAGVLALAGGSRLPGALIVA
LSAGLLVPPLTVEMRLLGFFLAAPPPDQSILTTAQYTLAGALAAGALAWILARRRFGRPPCSWTMLDCGGPGAEIDMDAA
LASLSAETLRRRDRAYIDAPPPLPFAPRGPPRPPPPTLGGPRLKRMPAGLGGAILCLESDDHTLRVHTTQGSGTLAGRLG
DAALDLGESAGLRVHRSWWVAREAVSAIERDGRRMRLILLNGMDVPVSRAHQPKVLAGPWPNLRVS

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32138; Mature: 32007

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTPLLASSQPAAGRRALGLSARLAFAALAGGGGLAWIDRGDTALWLIAPALLWLQVLL
CCCCCCCCCCCCCCCCHHHCHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHHHHH
TLAGVLALAGGSRLPGALIVALSAGLLVPPLTVEMRLLGFFLAAPPPDQSILTTAQYTLA
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GALAAGALAWILARRRFGRPPCSWTMLDCGGPGAEIDMDAALASLSAETLRRRDRAYIDA
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCEEECC
PPPLPFAPRGPPRPPPPTLGGPRLKRMPAGLGGAILCLESDDHTLRVHTTQGSGTLAGRL
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCC
GDAALDLGESAGLRVHRSWWVAREAVSAIERDGRRMRLILLNGMDVPVSRAHQPKVLAGP
CHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEECC
WPNLRVS
CCCCCCC
>Mature Secondary Structure 
PDTPLLASSQPAAGRRALGLSARLAFAALAGGGGLAWIDRGDTALWLIAPALLWLQVLL
CCCCCCCCCCCCCCCHHHCHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHHHHH
TLAGVLALAGGSRLPGALIVALSAGLLVPPLTVEMRLLGFFLAAPPPDQSILTTAQYTLA
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GALAAGALAWILARRRFGRPPCSWTMLDCGGPGAEIDMDAALASLSAETLRRRDRAYIDA
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCEEECC
PPPLPFAPRGPPRPPPPTLGGPRLKRMPAGLGGAILCLESDDHTLRVHTTQGSGTLAGRL
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCC
GDAALDLGESAGLRVHRSWWVAREAVSAIERDGRRMRLILLNGMDVPVSRAHQPKVLAGP
CHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCEEECC
WPNLRVS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA