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The map label for this gene is clpS [H]

Identifier: 83593445

GI number: 83593445

Start: 2449052

End: 2449465

Strand: Reverse

Name: clpS [H]

Synonym: Rru_A2110

Alternate gene names: 83593445

Gene position: 2449465-2449052 (Counterclockwise)

Preceding gene: 83593446

Following gene: 83593444

Centisome position: 56.27

GC content: 57.25

Gene sequence:

>414_bases
ATGAACACCGAAAGCCAAAGCGCAAAGATGACCACACGCGATCATGACATGGCTCCCCGCCTCGGGCAGGGCGGGGACGA
TCAAAACGACGACGACCGCGGTGGCCAGGGTCCTGGTCAACCGGGAACGGGCGTGGTCGTCAAGGCCAAGCCGAAGACGA
AGAAGCCCTCGATGTATAGGGTTTTGATGCTCAACGACGATTACACGCCGATGGAATTCGTCGTGCATGTCCTCGAACGG
TTCTTTGGCAAGACCCACGAGGAAGCGACCAATATCATGCTCCACGTTCATCAGCGCGGGGTGGGACTTTGTGGGGTTTA
TACCTATGAAGTCGCTGAGACCAAGGTCAGTCAGGTCATGGATCTGGCCCGGCGGTCCCAGCATCCCCTTCAATGCACGC
TGGAAAAGGAATAG

Upstream 100 bases:

>100_bases
CTTGCTGGCCGTCTTGCCGGGCCTTGCGGGACGACCCGCCGATTTGGCCCTTTATCGCCGGCAAAAATTACCAATATGAT
GCAGAGACGATCCCAGGGAT

Downstream 100 bases:

>100_bases
GCCGCGCCTTGTGGTCGGTCAAAAGGCGGTGCCTTTGGGCCGGTTAGGGTCCGGGGCGCCGCGGCCCGGTCGGGGATGGA
TCGGGACCTAAGTTTGAGCC

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNTESQSAKMTTRDHDMAPRLGQGGDDQNDDDRGGQGPGQPGTGVVVKAKPKTKKPSMYRVLMLNDDYTPMEFVVHVLER
FFGKTHEEATNIMLHVHQRGVGLCGVYTYEVAETKVSQVMDLARRSQHPLQCTLEKE

Sequences:

>Translated_137_residues
MNTESQSAKMTTRDHDMAPRLGQGGDDQNDDDRGGQGPGQPGTGVVVKAKPKTKKPSMYRVLMLNDDYTPMEFVVHVLER
FFGKTHEEATNIMLHVHQRGVGLCGVYTYEVAETKVSQVMDLARRSQHPLQCTLEKE
>Mature_137_residues
MNTESQSAKMTTRDHDMAPRLGQGGDDQNDDDRGGQGPGQPGTGVVVKAKPKTKKPSMYRVLMLNDDYTPMEFVVHVLER
FFGKTHEEATNIMLHVHQRGVGLCGVYTYEVAETKVSQVMDLARRSQHPLQCTLEKE

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=89, Percent_Identity=57.3033707865169, Blast_Score=113, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 15333; Mature: 15333

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTESQSAKMTTRDHDMAPRLGQGGDDQNDDDRGGQGPGQPGTGVVVKAKPKTKKPSMYR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEE
VLMLNDDYTPMEFVVHVLERFFGKTHEEATNIMLHVHQRGVGLCGVYTYEVAETKVSQVM
EEEECCCCCHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCEEEEEEHHHHHHHHHHHH
DLARRSQHPLQCTLEKE
HHHHHCCCCEEEEEECC
>Mature Secondary Structure
MNTESQSAKMTTRDHDMAPRLGQGGDDQNDDDRGGQGPGQPGTGVVVKAKPKTKKPSMYR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEE
VLMLNDDYTPMEFVVHVLERFFGKTHEEATNIMLHVHQRGVGLCGVYTYEVAETKVSQVM
EEEECCCCCHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCEEEEEEHHHHHHHHHHHH
DLARRSQHPLQCTLEKE
HHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA