| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593446
Identifier: 83593446
GI number: 83593446
Start: 2449671
End: 2450588
Strand: Reverse
Name: 83593446
Synonym: Rru_A2111
Alternate gene names: NA
Gene position: 2450588-2449671 (Counterclockwise)
Preceding gene: 83593447
Following gene: 83593445
Centisome position: 56.3
GC content: 67.76
Gene sequence:
>918_bases ATGACGACCCCCCCTAAGAAAAAAGCCGGAGACGATCCGGATCTTCCCGACGACCCGTCGTCGGTCGACCCATCCTTGGC GACGCGGTCTGAAGGTTCGAGCCGTGAGAGCCGATCTGCCACCGACGAGACGGCGGAACGCCGCGCGTCGGAGAAGTCCT CCGATGACGACCCCGCGATTCAGCGGGCGCGAAAAGTGCTTGAAGATCCCATCCCCTTTTCCCTCGCCGCCTTCGAAGAA GTCCTGGCGGCGAGCCGGATCGGCGTGGAAGGGGCGGTGACGGCCAGTATCCGCTCGCTGGGGATCTTTTTCTCCCTGGC TGAATCCGTGTTCGACGCCGCCAGCGCCACCTTCGATCAAACCTACGGCACCCTGGCTTCGGCCTCGGCCAACCGCAGGG GTGTCGATGGTCGCGGGCCCGACGAGAAGAACCGCGACGCCGCCGCCATTGATCGGGCGGGCGAGGAGGGCCGCGAACGC GTCGCCGAGGTGCGCAGCGTGGTCGGCCGAACTTGGGGGGCCTTGGGAGAAAGCGCCTCGGAAGCCCTGCGCGGCTTCCA GGACGTGGCCTTCCTTGGCTTCGATCTGATCGAACAGAACGCCCGTGACAGCGCCAATCTGACCCGGGCCCTGGCGGCCA AAACGCGGCGCATCGCCACCGAGGTCGATGGCAAGACGGGCGCTCACCACCTGCTTGACGTCGAAGACCTTCAGAACCTG GAACAGGAGGCCGCCGAACAACAGGCCGAACTGCTGGGCACCATCGCCAGCCGGGTGGCCGAAACCTCGAGCGTCGGCAT CGAGCGATCGTGGAAGGCGGCGGAAGGGGCCCTGACCCCGCTCGCCCGTCAGGCGGAAGCGGCGGCGCGTCTGTTCACCC GCCGGGGTGATGGAGCGGGCGCCGGCGCCGCCGGTTAG
Upstream 100 bases:
>100_bases GTGCGGTATTATAAGGCGGGGATCCGGGCCGTGGTCCGTATCCCTCCTCCTGTCCATGTCTTTTGGGGGCACAACCAGAA GCGGAAAAGGAGCGAGAGCA
Downstream 100 bases:
>100_bases GGGCCTTTCCCCGTAAGGGGCGGGCACTTGGCCGGGCACGACCTTCGGTCGAAAAAGGCTTCCCCAGGGCCTCCTGTGGG AAGCCTTTCCCTTTTCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTTPPKKKAGDDPDLPDDPSSVDPSLATRSEGSSRESRSATDETAERRASEKSSDDDPAIQRARKVLEDPIPFSLAAFEE VLAASRIGVEGAVTASIRSLGIFFSLAESVFDAASATFDQTYGTLASASANRRGVDGRGPDEKNRDAAAIDRAGEEGRER VAEVRSVVGRTWGALGESASEALRGFQDVAFLGFDLIEQNARDSANLTRALAAKTRRIATEVDGKTGAHHLLDVEDLQNL EQEAAEQQAELLGTIASRVAETSSVGIERSWKAAEGALTPLARQAEAAARLFTRRGDGAGAGAAG
Sequences:
>Translated_305_residues MTTPPKKKAGDDPDLPDDPSSVDPSLATRSEGSSRESRSATDETAERRASEKSSDDDPAIQRARKVLEDPIPFSLAAFEE VLAASRIGVEGAVTASIRSLGIFFSLAESVFDAASATFDQTYGTLASASANRRGVDGRGPDEKNRDAAAIDRAGEEGRER VAEVRSVVGRTWGALGESASEALRGFQDVAFLGFDLIEQNARDSANLTRALAAKTRRIATEVDGKTGAHHLLDVEDLQNL EQEAAEQQAELLGTIASRVAETSSVGIERSWKAAEGALTPLARQAEAAARLFTRRGDGAGAGAAG >Mature_304_residues TTPPKKKAGDDPDLPDDPSSVDPSLATRSEGSSRESRSATDETAERRASEKSSDDDPAIQRARKVLEDPIPFSLAAFEEV LAASRIGVEGAVTASIRSLGIFFSLAESVFDAASATFDQTYGTLASASANRRGVDGRGPDEKNRDAAAIDRAGEEGRERV AEVRSVVGRTWGALGESASEALRGFQDVAFLGFDLIEQNARDSANLTRALAAKTRRIATEVDGKTGAHHLLDVEDLQNLE QEAAEQQAELLGTIASRVAETSSVGIERSWKAAEGALTPLARQAEAAARLFTRRGDGAGAGAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32112; Mature: 31981
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPPKKKAGDDPDLPDDPSSVDPSLATRSEGSSRESRSATDETAERRASEKSSDDDPAI CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHCHHHHHHHHHHHCCCCCCCHHH QRARKVLEDPIPFSLAAFEEVLAASRIGVEGAVTASIRSLGIFFSLAESVFDAASATFDQ HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYGTLASASANRRGVDGRGPDEKNRDAAAIDRAGEEGRERVAEVRSVVGRTWGALGESAS HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EALRGFQDVAFLGFDLIEQNARDSANLTRALAAKTRRIATEVDGKTGAHHLLDVEDLQNL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHH EQEAAEQQAELLGTIASRVAETSSVGIERSWKAAEGALTPLARQAEAAARLFTRRGDGAG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AGAAG CCCCC >Mature Secondary Structure TTPPKKKAGDDPDLPDDPSSVDPSLATRSEGSSRESRSATDETAERRASEKSSDDDPAI CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHCHHHHHHHHHHHCCCCCCCHHH QRARKVLEDPIPFSLAAFEEVLAASRIGVEGAVTASIRSLGIFFSLAESVFDAASATFDQ HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYGTLASASANRRGVDGRGPDEKNRDAAAIDRAGEEGRERVAEVRSVVGRTWGALGESAS HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EALRGFQDVAFLGFDLIEQNARDSANLTRALAAKTRRIATEVDGKTGAHHLLDVEDLQNL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHH EQEAAEQQAELLGTIASRVAETSSVGIERSWKAAEGALTPLARQAEAAARLFTRRGDGAG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AGAAG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA