Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is cphA [H]

Identifier: 83593323

GI number: 83593323

Start: 2298012

End: 2299700

Strand: Reverse

Name: cphA [H]

Synonym: Rru_A1988

Alternate gene names: 83593323

Gene position: 2299700-2298012 (Counterclockwise)

Preceding gene: 83593324

Following gene: 83593322

Centisome position: 52.83

GC content: 66.55

Gene sequence:

>1689_bases
ATGGACGATCTTTCCCACGAGTTCAAAAAAGAGGCCTCGATTGATTGCGGCTGGGGCCGGCTGGTCTTTGGTCAGACCTT
CGACGGCCCCGGGCGTCTTGCCGAGGTGATGCGGACCGAGGGACCCGAGCGCCGCGACGTGGCGATCTATGTGCGCGATC
CCCATGTGGTCTTGGCGATGGCCCCCCACGAGATGTTCCTTGATCCCTCCCATACCTATCGTCTGGATCTGGCGCGCTAT
CGGCCAAGCGCCCGTCAGCCCCATGGCTTCACGATCCGCCCTTTGGCCGGGCCGGGCGATGTCGATGATATCAACCGCAT
CTACGCCGCCCGTCATATGGTGGCGGTCCGCCCCGATTTCTTCGAGGGGCCGCTCGCCAGCCGCGGGATCACCCTGTTGG
TCGCCGAGGAGGGCGCCGGCGGACGGATTATCGGCACGGTGATGGCCATCGATCATGGCCGGGCGTTTGGCGATCCCGCG
CGCGGCTCGTCGTTCTGGTGCTTGGCCGTGGATCCCCAGGCGATCCATCCCGGCATCGGCGAGGCCCTGGTTCGCGCCGC
CGTCGAGCAACTGGCTGGCGCCGGAGCCACCCATACCGACCTCACGGTCATGCACGATAATGATCAGGCCATCGCCCTTT
ATGACAAGCTGGGCTTTGAGCGCGTCGATTTTTTCACCATGAAGCGCAAGAATCCGATCAACGAACGCCTGTTTACCGGT
CCGGCCCCCGAGGCGAGGCTCAACCCCTATGCCGAAATCATCGTGACCGAGGCGCGGCGCCGGGGCATCGACGTGAGGGT
CACCGATGCCGAGGGCGGGTTTTTCCGCCTGTCCTTTGGCGGGCGCTCGGTTCACTGCCGGGAAAGCCTCAGCGAGTTGA
CCTCGGGCGTGGCGGTCAGTATTTGCGACGACAAGGCGGTGACCCGGCGGCTGGTCGAAGCGGCGGGCATTTGCGTGCCC
GAACAGATCGAGGCCGGGGATGGGGCGGCCGTTCGCGCCTTCCTCGCCCACCATGGCAGCGTCGTCGTCAAGCCGGCGCG
CGGTGAGCAGGGGCGGGGGATCGCCGTTGGTCTTGATACGGCCGAGGCGGTGGACGCGGCGATCGTCACGGCCGGGCGCT
TCTGCGAGCGGGTGCTTGTCGAGCGCTGCGCCGCGGGCGAGGATTTGCGGCTGATCATCATCGACTTCCACCTTGTCGCC
GCGGCTCTCCGCCGGCCGCCGCGGGTGACGGGCGATGCCAAAACGACGCTGCGCGACCTGATCGCCGTGCAAAGTCGGCG
GCGGGCGGCGGCGACCGGGGGGGAATCCTCCATTCCACTTGATGATGAAACCGTGCGCTGTCTGGCGGCCAGCGGCTTCA
CGCTTGAGGACGTGCCGGTCGAGGGGTGCGATATCGTCGTCCGGCGCACCGCCAATCTGCATACGGGCGGCACCATTCAC
GACGTGACCGACGAGGTTCATCCCGATCTGGTCGCGGCGGGGATCCGGGCGGCGCGGGCCATCGATATCCCGGTCGTCGG
CATCGATCTGCTGGTGCGGTCGCCGCGCGCGCCCGATTATGTGTTCATCGAGGCCAATGAGCGACCCGGTCTTGCCAACC
ACCAGCCCCAGCCGACGGCGGAACGCTTCATCGATTTGCTGTTTCCCAATTCGGTCCCGGCGGCGGTCCGCCAAGCCTCG
ATGATCTAG

Upstream 100 bases:

>100_bases
ATGAAAATCCGCGCGACGCCATCACCCCCTTGCGCGGATCGGAGCTTTGGCAGGTCGGGCTTCTTGAACTTTGGCTGCAA
GAGCATGGGATTTGAAGACC

Downstream 100 bases:

>100_bases
ATGTTTGAGAGGGAAGCAAATCGTCGTCGCGCTCTGATTCCGAGCGCTCGGGATTTGCTTAAACGGATGCGAAGGGATTT
TTCATGACGCGTCTGGCGAT

Product: GCN5-related N-acetyltransferase

Products: NA

Alternate protein names: Cyanophycin synthase [H]

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MDDLSHEFKKEASIDCGWGRLVFGQTFDGPGRLAEVMRTEGPERRDVAIYVRDPHVVLAMAPHEMFLDPSHTYRLDLARY
RPSARQPHGFTIRPLAGPGDVDDINRIYAARHMVAVRPDFFEGPLASRGITLLVAEEGAGGRIIGTVMAIDHGRAFGDPA
RGSSFWCLAVDPQAIHPGIGEALVRAAVEQLAGAGATHTDLTVMHDNDQAIALYDKLGFERVDFFTMKRKNPINERLFTG
PAPEARLNPYAEIIVTEARRRGIDVRVTDAEGGFFRLSFGGRSVHCRESLSELTSGVAVSICDDKAVTRRLVEAAGICVP
EQIEAGDGAAVRAFLAHHGSVVVKPARGEQGRGIAVGLDTAEAVDAAIVTAGRFCERVLVERCAAGEDLRLIIIDFHLVA
AALRRPPRVTGDAKTTLRDLIAVQSRRRAAATGGESSIPLDDETVRCLAASGFTLEDVPVEGCDIVVRRTANLHTGGTIH
DVTDEVHPDLVAAGIRAARAIDIPVVGIDLLVRSPRAPDYVFIEANERPGLANHQPQPTAERFIDLLFPNSVPAAVRQAS
MI

Sequences:

>Translated_562_residues
MDDLSHEFKKEASIDCGWGRLVFGQTFDGPGRLAEVMRTEGPERRDVAIYVRDPHVVLAMAPHEMFLDPSHTYRLDLARY
RPSARQPHGFTIRPLAGPGDVDDINRIYAARHMVAVRPDFFEGPLASRGITLLVAEEGAGGRIIGTVMAIDHGRAFGDPA
RGSSFWCLAVDPQAIHPGIGEALVRAAVEQLAGAGATHTDLTVMHDNDQAIALYDKLGFERVDFFTMKRKNPINERLFTG
PAPEARLNPYAEIIVTEARRRGIDVRVTDAEGGFFRLSFGGRSVHCRESLSELTSGVAVSICDDKAVTRRLVEAAGICVP
EQIEAGDGAAVRAFLAHHGSVVVKPARGEQGRGIAVGLDTAEAVDAAIVTAGRFCERVLVERCAAGEDLRLIIIDFHLVA
AALRRPPRVTGDAKTTLRDLIAVQSRRRAAATGGESSIPLDDETVRCLAASGFTLEDVPVEGCDIVVRRTANLHTGGTIH
DVTDEVHPDLVAAGIRAARAIDIPVVGIDLLVRSPRAPDYVFIEANERPGLANHQPQPTAERFIDLLFPNSVPAAVRQAS
MI
>Mature_562_residues
MDDLSHEFKKEASIDCGWGRLVFGQTFDGPGRLAEVMRTEGPERRDVAIYVRDPHVVLAMAPHEMFLDPSHTYRLDLARY
RPSARQPHGFTIRPLAGPGDVDDINRIYAARHMVAVRPDFFEGPLASRGITLLVAEEGAGGRIIGTVMAIDHGRAFGDPA
RGSSFWCLAVDPQAIHPGIGEALVRAAVEQLAGAGATHTDLTVMHDNDQAIALYDKLGFERVDFFTMKRKNPINERLFTG
PAPEARLNPYAEIIVTEARRRGIDVRVTDAEGGFFRLSFGGRSVHCRESLSELTSGVAVSICDDKAVTRRLVEAAGICVP
EQIEAGDGAAVRAFLAHHGSVVVKPARGEQGRGIAVGLDTAEAVDAAIVTAGRFCERVLVERCAAGEDLRLIIIDFHLVA
AALRRPPRVTGDAKTTLRDLIAVQSRRRAAATGGESSIPLDDETVRCLAASGFTLEDVPVEGCDIVVRRTANLHTGGTIH
DVTDEVHPDLVAAGIRAARAIDIPVVGIDLLVRSPRAPDYVFIEANERPGLANHQPQPTAERFIDLLFPNSVPAAVRQAS
MI

Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]

COG id: COG1181

COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR011810
- InterPro:   IPR004101
- InterPro:   IPR013221 [H]

Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]

EC number: =6.3.2.29; =6.3.2.30 [H]

Molecular weight: Translated: 60732; Mature: 60732

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLSHEFKKEASIDCGWGRLVFGQTFDGPGRLAEVMRTEGPERRDVAIYVRDPHVVLAM
CCCHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCEEEEEE
APHEMFLDPSHTYRLDLARYRPSARQPHGFTIRPLAGPGDVDDINRIYAARHMVAVRPDF
CCHHHCCCCCCEEEEEHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEEEECCCC
FEGPLASRGITLLVAEEGAGGRIIGTVMAIDHGRAFGDPARGSSFWCLAVDPQAIHPGIG
CCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHCCCHH
EALVRAAVEQLAGAGATHTDLTVMHDNDQAIALYDKLGFERVDFFTMKRKNPINERLFTG
HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCC
PAPEARLNPYAEIIVTEARRRGIDVRVTDAEGGFFRLSFGGRSVHCRESLSELTSGVAVS
CCCCCCCCCHHHEEEEHHHHCCCEEEEEECCCCEEEEECCCCEEHHHHHHHHHHCCEEEE
ICDDKAVTRRLVEAAGICVPEQIEAGDGAAVRAFLAHHGSVVVKPARGEQGRGIAVGLDT
EECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEECCC
AEAVDAAIVTAGRFCERVLVERCAAGEDLRLIIIDFHLVAAALRRPPRVTGDAKTTLRDL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHH
IAVQSRRRAAATGGESSIPLDDETVRCLAASGFTLEDVPVEGCDIVVRRTANLHTGGTIH
HHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCEEECCCCCCCEEEEEECCCCCCCCCEE
DVTDEVHPDLVAAGIRAARAIDIPVVGIDLLVRSPRAPDYVFIEANERPGLANHQPQPTA
CCCHHHCHHHHHHHHHHHEEECCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHH
ERFIDLLFPNSVPAAVRQASMI
HHHHHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure
MDDLSHEFKKEASIDCGWGRLVFGQTFDGPGRLAEVMRTEGPERRDVAIYVRDPHVVLAM
CCCHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCEEEEEE
APHEMFLDPSHTYRLDLARYRPSARQPHGFTIRPLAGPGDVDDINRIYAARHMVAVRPDF
CCHHHCCCCCCEEEEEHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEEEECCCC
FEGPLASRGITLLVAEEGAGGRIIGTVMAIDHGRAFGDPARGSSFWCLAVDPQAIHPGIG
CCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHCCCHH
EALVRAAVEQLAGAGATHTDLTVMHDNDQAIALYDKLGFERVDFFTMKRKNPINERLFTG
HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCC
PAPEARLNPYAEIIVTEARRRGIDVRVTDAEGGFFRLSFGGRSVHCRESLSELTSGVAVS
CCCCCCCCCHHHEEEEHHHHCCCEEEEEECCCCEEEEECCCCEEHHHHHHHHHHCCEEEE
ICDDKAVTRRLVEAAGICVPEQIEAGDGAAVRAFLAHHGSVVVKPARGEQGRGIAVGLDT
EECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEECCC
AEAVDAAIVTAGRFCERVLVERCAAGEDLRLIIIDFHLVAAALRRPPRVTGDAKTTLRDL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHH
IAVQSRRRAAATGGESSIPLDDETVRCLAASGFTLEDVPVEGCDIVVRRTANLHTGGTIH
HHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCEEECCCCCCCEEEEEECCCCCCCCCEE
DVTDEVHPDLVAAGIRAARAIDIPVVGIDLLVRSPRAPDYVFIEANERPGLANHQPQPTA
CCCHHHCHHHHHHHHHHHEEECCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHH
ERFIDLLFPNSVPAAVRQASMI
HHHHHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9652408 [H]