| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is cphA [H]
Identifier: 83593323
GI number: 83593323
Start: 2298012
End: 2299700
Strand: Reverse
Name: cphA [H]
Synonym: Rru_A1988
Alternate gene names: 83593323
Gene position: 2299700-2298012 (Counterclockwise)
Preceding gene: 83593324
Following gene: 83593322
Centisome position: 52.83
GC content: 66.55
Gene sequence:
>1689_bases ATGGACGATCTTTCCCACGAGTTCAAAAAAGAGGCCTCGATTGATTGCGGCTGGGGCCGGCTGGTCTTTGGTCAGACCTT CGACGGCCCCGGGCGTCTTGCCGAGGTGATGCGGACCGAGGGACCCGAGCGCCGCGACGTGGCGATCTATGTGCGCGATC CCCATGTGGTCTTGGCGATGGCCCCCCACGAGATGTTCCTTGATCCCTCCCATACCTATCGTCTGGATCTGGCGCGCTAT CGGCCAAGCGCCCGTCAGCCCCATGGCTTCACGATCCGCCCTTTGGCCGGGCCGGGCGATGTCGATGATATCAACCGCAT CTACGCCGCCCGTCATATGGTGGCGGTCCGCCCCGATTTCTTCGAGGGGCCGCTCGCCAGCCGCGGGATCACCCTGTTGG TCGCCGAGGAGGGCGCCGGCGGACGGATTATCGGCACGGTGATGGCCATCGATCATGGCCGGGCGTTTGGCGATCCCGCG CGCGGCTCGTCGTTCTGGTGCTTGGCCGTGGATCCCCAGGCGATCCATCCCGGCATCGGCGAGGCCCTGGTTCGCGCCGC CGTCGAGCAACTGGCTGGCGCCGGAGCCACCCATACCGACCTCACGGTCATGCACGATAATGATCAGGCCATCGCCCTTT ATGACAAGCTGGGCTTTGAGCGCGTCGATTTTTTCACCATGAAGCGCAAGAATCCGATCAACGAACGCCTGTTTACCGGT CCGGCCCCCGAGGCGAGGCTCAACCCCTATGCCGAAATCATCGTGACCGAGGCGCGGCGCCGGGGCATCGACGTGAGGGT CACCGATGCCGAGGGCGGGTTTTTCCGCCTGTCCTTTGGCGGGCGCTCGGTTCACTGCCGGGAAAGCCTCAGCGAGTTGA CCTCGGGCGTGGCGGTCAGTATTTGCGACGACAAGGCGGTGACCCGGCGGCTGGTCGAAGCGGCGGGCATTTGCGTGCCC GAACAGATCGAGGCCGGGGATGGGGCGGCCGTTCGCGCCTTCCTCGCCCACCATGGCAGCGTCGTCGTCAAGCCGGCGCG CGGTGAGCAGGGGCGGGGGATCGCCGTTGGTCTTGATACGGCCGAGGCGGTGGACGCGGCGATCGTCACGGCCGGGCGCT TCTGCGAGCGGGTGCTTGTCGAGCGCTGCGCCGCGGGCGAGGATTTGCGGCTGATCATCATCGACTTCCACCTTGTCGCC GCGGCTCTCCGCCGGCCGCCGCGGGTGACGGGCGATGCCAAAACGACGCTGCGCGACCTGATCGCCGTGCAAAGTCGGCG GCGGGCGGCGGCGACCGGGGGGGAATCCTCCATTCCACTTGATGATGAAACCGTGCGCTGTCTGGCGGCCAGCGGCTTCA CGCTTGAGGACGTGCCGGTCGAGGGGTGCGATATCGTCGTCCGGCGCACCGCCAATCTGCATACGGGCGGCACCATTCAC GACGTGACCGACGAGGTTCATCCCGATCTGGTCGCGGCGGGGATCCGGGCGGCGCGGGCCATCGATATCCCGGTCGTCGG CATCGATCTGCTGGTGCGGTCGCCGCGCGCGCCCGATTATGTGTTCATCGAGGCCAATGAGCGACCCGGTCTTGCCAACC ACCAGCCCCAGCCGACGGCGGAACGCTTCATCGATTTGCTGTTTCCCAATTCGGTCCCGGCGGCGGTCCGCCAAGCCTCG ATGATCTAG
Upstream 100 bases:
>100_bases ATGAAAATCCGCGCGACGCCATCACCCCCTTGCGCGGATCGGAGCTTTGGCAGGTCGGGCTTCTTGAACTTTGGCTGCAA GAGCATGGGATTTGAAGACC
Downstream 100 bases:
>100_bases ATGTTTGAGAGGGAAGCAAATCGTCGTCGCGCTCTGATTCCGAGCGCTCGGGATTTGCTTAAACGGATGCGAAGGGATTT TTCATGACGCGTCTGGCGAT
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Cyanophycin synthase [H]
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MDDLSHEFKKEASIDCGWGRLVFGQTFDGPGRLAEVMRTEGPERRDVAIYVRDPHVVLAMAPHEMFLDPSHTYRLDLARY RPSARQPHGFTIRPLAGPGDVDDINRIYAARHMVAVRPDFFEGPLASRGITLLVAEEGAGGRIIGTVMAIDHGRAFGDPA RGSSFWCLAVDPQAIHPGIGEALVRAAVEQLAGAGATHTDLTVMHDNDQAIALYDKLGFERVDFFTMKRKNPINERLFTG PAPEARLNPYAEIIVTEARRRGIDVRVTDAEGGFFRLSFGGRSVHCRESLSELTSGVAVSICDDKAVTRRLVEAAGICVP EQIEAGDGAAVRAFLAHHGSVVVKPARGEQGRGIAVGLDTAEAVDAAIVTAGRFCERVLVERCAAGEDLRLIIIDFHLVA AALRRPPRVTGDAKTTLRDLIAVQSRRRAAATGGESSIPLDDETVRCLAASGFTLEDVPVEGCDIVVRRTANLHTGGTIH DVTDEVHPDLVAAGIRAARAIDIPVVGIDLLVRSPRAPDYVFIEANERPGLANHQPQPTAERFIDLLFPNSVPAAVRQAS MI
Sequences:
>Translated_562_residues MDDLSHEFKKEASIDCGWGRLVFGQTFDGPGRLAEVMRTEGPERRDVAIYVRDPHVVLAMAPHEMFLDPSHTYRLDLARY RPSARQPHGFTIRPLAGPGDVDDINRIYAARHMVAVRPDFFEGPLASRGITLLVAEEGAGGRIIGTVMAIDHGRAFGDPA RGSSFWCLAVDPQAIHPGIGEALVRAAVEQLAGAGATHTDLTVMHDNDQAIALYDKLGFERVDFFTMKRKNPINERLFTG PAPEARLNPYAEIIVTEARRRGIDVRVTDAEGGFFRLSFGGRSVHCRESLSELTSGVAVSICDDKAVTRRLVEAAGICVP EQIEAGDGAAVRAFLAHHGSVVVKPARGEQGRGIAVGLDTAEAVDAAIVTAGRFCERVLVERCAAGEDLRLIIIDFHLVA AALRRPPRVTGDAKTTLRDLIAVQSRRRAAATGGESSIPLDDETVRCLAASGFTLEDVPVEGCDIVVRRTANLHTGGTIH DVTDEVHPDLVAAGIRAARAIDIPVVGIDLLVRSPRAPDYVFIEANERPGLANHQPQPTAERFIDLLFPNSVPAAVRQAS MI >Mature_562_residues MDDLSHEFKKEASIDCGWGRLVFGQTFDGPGRLAEVMRTEGPERRDVAIYVRDPHVVLAMAPHEMFLDPSHTYRLDLARY RPSARQPHGFTIRPLAGPGDVDDINRIYAARHMVAVRPDFFEGPLASRGITLLVAEEGAGGRIIGTVMAIDHGRAFGDPA RGSSFWCLAVDPQAIHPGIGEALVRAAVEQLAGAGATHTDLTVMHDNDQAIALYDKLGFERVDFFTMKRKNPINERLFTG PAPEARLNPYAEIIVTEARRRGIDVRVTDAEGGFFRLSFGGRSVHCRESLSELTSGVAVSICDDKAVTRRLVEAAGICVP EQIEAGDGAAVRAFLAHHGSVVVKPARGEQGRGIAVGLDTAEAVDAAIVTAGRFCERVLVERCAAGEDLRLIIIDFHLVA AALRRPPRVTGDAKTTLRDLIAVQSRRRAAATGGESSIPLDDETVRCLAASGFTLEDVPVEGCDIVVRRTANLHTGGTIH DVTDEVHPDLVAAGIRAARAIDIPVVGIDLLVRSPRAPDYVFIEANERPGLANHQPQPTAERFIDLLFPNSVPAAVRQAS MI
Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]
COG id: COG1181
COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011810 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]
EC number: =6.3.2.29; =6.3.2.30 [H]
Molecular weight: Translated: 60732; Mature: 60732
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLSHEFKKEASIDCGWGRLVFGQTFDGPGRLAEVMRTEGPERRDVAIYVRDPHVVLAM CCCHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCEEEEEE APHEMFLDPSHTYRLDLARYRPSARQPHGFTIRPLAGPGDVDDINRIYAARHMVAVRPDF CCHHHCCCCCCEEEEEHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEEEECCCC FEGPLASRGITLLVAEEGAGGRIIGTVMAIDHGRAFGDPARGSSFWCLAVDPQAIHPGIG CCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHCCCHH EALVRAAVEQLAGAGATHTDLTVMHDNDQAIALYDKLGFERVDFFTMKRKNPINERLFTG HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCC PAPEARLNPYAEIIVTEARRRGIDVRVTDAEGGFFRLSFGGRSVHCRESLSELTSGVAVS CCCCCCCCCHHHEEEEHHHHCCCEEEEEECCCCEEEEECCCCEEHHHHHHHHHHCCEEEE ICDDKAVTRRLVEAAGICVPEQIEAGDGAAVRAFLAHHGSVVVKPARGEQGRGIAVGLDT EECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEECCC AEAVDAAIVTAGRFCERVLVERCAAGEDLRLIIIDFHLVAAALRRPPRVTGDAKTTLRDL HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHH IAVQSRRRAAATGGESSIPLDDETVRCLAASGFTLEDVPVEGCDIVVRRTANLHTGGTIH HHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCEEECCCCCCCEEEEEECCCCCCCCCEE DVTDEVHPDLVAAGIRAARAIDIPVVGIDLLVRSPRAPDYVFIEANERPGLANHQPQPTA CCCHHHCHHHHHHHHHHHEEECCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHH ERFIDLLFPNSVPAAVRQASMI HHHHHHHCCCCCCHHHHHHCCC >Mature Secondary Structure MDDLSHEFKKEASIDCGWGRLVFGQTFDGPGRLAEVMRTEGPERRDVAIYVRDPHVVLAM CCCHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCEEEEEE APHEMFLDPSHTYRLDLARYRPSARQPHGFTIRPLAGPGDVDDINRIYAARHMVAVRPDF CCHHHCCCCCCEEEEEHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEEEECCCC FEGPLASRGITLLVAEEGAGGRIIGTVMAIDHGRAFGDPARGSSFWCLAVDPQAIHPGIG CCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHCCCHH EALVRAAVEQLAGAGATHTDLTVMHDNDQAIALYDKLGFERVDFFTMKRKNPINERLFTG HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCC PAPEARLNPYAEIIVTEARRRGIDVRVTDAEGGFFRLSFGGRSVHCRESLSELTSGVAVS CCCCCCCCCHHHEEEEHHHHCCCEEEEEECCCCEEEEECCCCEEHHHHHHHHHHCCEEEE ICDDKAVTRRLVEAAGICVPEQIEAGDGAAVRAFLAHHGSVVVKPARGEQGRGIAVGLDT EECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEECCC AEAVDAAIVTAGRFCERVLVERCAAGEDLRLIIIDFHLVAAALRRPPRVTGDAKTTLRDL HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHH IAVQSRRRAAATGGESSIPLDDETVRCLAASGFTLEDVPVEGCDIVVRRTANLHTGGTIH HHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCEEECCCCCCCEEEEEECCCCCCCCCEE DVTDEVHPDLVAAGIRAARAIDIPVVGIDLLVRSPRAPDYVFIEANERPGLANHQPQPTA CCCHHHCHHHHHHHHHHHEEECCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHH ERFIDLLFPNSVPAAVRQASMI HHHHHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9652408 [H]