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The map label for this gene is fdxD [H]

Identifier: 83593251

GI number: 83593251

Start: 2220631

End: 2221014

Strand: Direct

Name: fdxD [H]

Synonym: Rru_A1916

Alternate gene names: 83593251

Gene position: 2220631-2221014 (Clockwise)

Preceding gene: 83593250

Following gene: 83593252

Centisome position: 51.02

GC content: 64.32

Gene sequence:

>384_bases
ATGGCCACAGTCACCTTCTCCTCGCCGATCCTTGCCAAAGACGTCACCGTCTACGCCGTCGCCGGCGACATGGGCACTTT
GCTTGCCCTGGCCCGGCGCAACGCCATTCCGCTGCCCTGCCAGTGCCAGGATGGCGAATGCGGCTCGTGCCTAATCAAGG
TCACCGATCTTGGCGACACCGCGCCCAAGGCCCAGGCCCTGACCGAACGCGAAAAAACCACGCTGTCGGTCAACGGCAAG
CTCAGCCGCGATCTGCTCGACCGGGCGGAGGGCGCCAATATGGCGCCGCCTTACCGTCTGGCCTGCCAATTCGTGGTGCC
CGACTCGGATATTCTGGTCGAGTTTTCCGGCGAACCGGGGGTGGAGATTGATCTCCGCCGCTGA

Upstream 100 bases:

>100_bases
CCGCGAGATGGGATTGGGAGCTTTTGGCCCCCTCCCCGCCTCGGCCCTCCCCCCGGCGGCGATCCAACCGATCACTCATG
CGCCATTTCAGGGGGACACC

Downstream 100 bases:

>100_bases
TTATCGGATGTGAAAGGCCGCTGCGGGCGCCCGCCTTGGGGCGCCCGTACGCTTTGGCGGGGCATCGCCGAAGCGATACA
ACCTCCCACCGGTATAATTG

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin V; FdV; Ferredoxin, plant-type [H]

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MATVTFSSPILAKDVTVYAVAGDMGTLLALARRNAIPLPCQCQDGECGSCLIKVTDLGDTAPKAQALTEREKTTLSVNGK
LSRDLLDRAEGANMAPPYRLACQFVVPDSDILVEFSGEPGVEIDLRR

Sequences:

>Translated_127_residues
MATVTFSSPILAKDVTVYAVAGDMGTLLALARRNAIPLPCQCQDGECGSCLIKVTDLGDTAPKAQALTEREKTTLSVNGK
LSRDLLDRAEGANMAPPYRLACQFVVPDSDILVEFSGEPGVEIDLRR
>Mature_126_residues
ATVTFSSPILAKDVTVYAVAGDMGTLLALARRNAIPLPCQCQDGECGSCLIKVTDLGDTAPKAQALTEREKTTLSVNGKL
SRDLLDRAEGANMAPPYRLACQFVVPDSDILVEFSGEPGVEIDLRR

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin probably participates in nitrogen fixation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 13555; Mature: 13424

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVTFSSPILAKDVTVYAVAGDMGTLLALARRNAIPLPCQCQDGECGSCLIKVTDLGDT
CEEEECCCCCEECCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCC
APKAQALTEREKTTLSVNGKLSRDLLDRAEGANMAPPYRLACQFVVPDSDILVEFSGEPG
CCCHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECCCCC
VEIDLRR
EEEEECC
>Mature Secondary Structure 
ATVTFSSPILAKDVTVYAVAGDMGTLLALARRNAIPLPCQCQDGECGSCLIKVTDLGDT
EEEECCCCCEECCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCC
APKAQALTEREKTTLSVNGKLSRDLLDRAEGANMAPPYRLACQFVVPDSDILVEFSGEPG
CCCHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECCCCC
VEIDLRR
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7693551 [H]