| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is rhlE [H]
Identifier: 83593250
GI number: 83593250
Start: 2219219
End: 2220400
Strand: Direct
Name: rhlE [H]
Synonym: Rru_A1915
Alternate gene names: 83593250
Gene position: 2219219-2220400 (Clockwise)
Preceding gene: 83593249
Following gene: 83593251
Centisome position: 50.98
GC content: 65.74
Gene sequence:
>1182_bases ATGACCGAATTTGCTTCGCTCGACTTGATCGAGCCGCTTGCCCGCGCCGTCACGGCGCTGGGCTATACCGTTGCGACTCC CATTCAGGCGGGGGCTATCCCTCCGCAGCTGTTGGGACGCGACGTGCTGGGCATTGCCCAAACCGGGACCGGCAAGACCG CGTCCTTCGTCCTGCCCCTGCTTCAGCGCCTGACCAAGGACCCCCAGCCCCGGGTTCCCGGCCGGCCGCGCGCCCTTATC CTGACGCCGACCCGCGAACTGGCCCAGCAGATCACCGAAAGCATCGGCGACCTTGGCCGGACGCTGTCGGCCATTCGCTG CGGCGTGGTGGTTGGCGGGGTCGATATCCTGCGCCAGACCCGCATGGTTCAGCGCGGCTTGGAAATCCTGGTGGCGACGC CCGGCCGCCTGCAAGATCTGATGAACCGCAAGGCCGTCGACCTGCGCGCCATCGAAGTTCTGGTGCTTGACGAAGCCGAC CGCATGCTCGACATGGGCTTCGCCCCCGCCGTCAAGAAGATCGCCGCCGTTCTGCCGCGCAAGCGCCAGACGGTGATGTT CTCGGCCACCCTGCCCAATGAAGTGACCGGGCTGGTCGCCAGCCTGATGAACGATCCGGTGCGCGTTGAAGTCGCTCCGG CGGCCAGCGTCGCCAATCGCATCGACCAGCGCGTGCTGTTCGTCGAACAGACCAACAAGCGTAAGCTGTTGCTTGATCTG CTCGGCGACGCCCGCAAGGTCGAACGCGCCATCGTCTTCACCCGCACCAAGCACGGCGCCAACAAGCTGGGCATCTTCTT GCTGGAATACGGCGTCAAAAGCGACGTGATCCACGGCAACAAGTCGCAAGGCGCCCGTCAGCGCGCGCTTAACGACTTCA AGTCGGGCAAGGTCCGCGCCCTGGTCGCCACCGATATCGCCGCGCGCGGCATCGATGTCGACGGCATCACCCATGTCATC AACTTCGACCTGCCCAACGAGCCCGAGAGCTACGTCCACCGCATCGGCCGCACGGCGCGGGCCGGCGCCGCGGGCATCGC GCTTTCGCTCTGCGCCCCCCAGGAAATGCCCTATCTGAAGGCGATCGAAAAGGTCATCAAAAGCCGGATCGACGTGGATT CCACCCACGCCTTCCATACGCCGTCGATGGCCCGCGCCCACGGCAGCCACGGCCACCGTTAA
Upstream 100 bases:
>100_bases TAACCGGCCCTCCTCCGCCCCTCCCTTGGACCGCGCCGTTCTCTGGCAGATCGGTCCATTGACCGATTTGTCCCATGAGA ACGGAAGGTTTCCTGTTTCT
Downstream 100 bases:
>100_bases GCGGCCGGCGCCTTTCCAACTAGGCATCCGAAGCGGGGCGCCCTCCTTGACGGGAGGGCGCCCCGCTTTTTTGACGATTC CGTACTTTTCATTGACCCTG
Product: DEAD/DEAH box helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTEFASLDLIEPLARAVTALGYTVATPIQAGAIPPQLLGRDVLGIAQTGTGKTASFVLPLLQRLTKDPQPRVPGRPRALI LTPTRELAQQITESIGDLGRTLSAIRCGVVVGGVDILRQTRMVQRGLEILVATPGRLQDLMNRKAVDLRAIEVLVLDEAD RMLDMGFAPAVKKIAAVLPRKRQTVMFSATLPNEVTGLVASLMNDPVRVEVAPAASVANRIDQRVLFVEQTNKRKLLLDL LGDARKVERAIVFTRTKHGANKLGIFLLEYGVKSDVIHGNKSQGARQRALNDFKSGKVRALVATDIAARGIDVDGITHVI NFDLPNEPESYVHRIGRTARAGAAGIALSLCAPQEMPYLKAIEKVIKSRIDVDSTHAFHTPSMARAHGSHGHR
Sequences:
>Translated_393_residues MTEFASLDLIEPLARAVTALGYTVATPIQAGAIPPQLLGRDVLGIAQTGTGKTASFVLPLLQRLTKDPQPRVPGRPRALI LTPTRELAQQITESIGDLGRTLSAIRCGVVVGGVDILRQTRMVQRGLEILVATPGRLQDLMNRKAVDLRAIEVLVLDEAD RMLDMGFAPAVKKIAAVLPRKRQTVMFSATLPNEVTGLVASLMNDPVRVEVAPAASVANRIDQRVLFVEQTNKRKLLLDL LGDARKVERAIVFTRTKHGANKLGIFLLEYGVKSDVIHGNKSQGARQRALNDFKSGKVRALVATDIAARGIDVDGITHVI NFDLPNEPESYVHRIGRTARAGAAGIALSLCAPQEMPYLKAIEKVIKSRIDVDSTHAFHTPSMARAHGSHGHR >Mature_392_residues TEFASLDLIEPLARAVTALGYTVATPIQAGAIPPQLLGRDVLGIAQTGTGKTASFVLPLLQRLTKDPQPRVPGRPRALIL TPTRELAQQITESIGDLGRTLSAIRCGVVVGGVDILRQTRMVQRGLEILVATPGRLQDLMNRKAVDLRAIEVLVLDEADR MLDMGFAPAVKKIAAVLPRKRQTVMFSATLPNEVTGLVASLMNDPVRVEVAPAASVANRIDQRVLFVEQTNKRKLLLDLL GDARKVERAIVFTRTKHGANKLGIFLLEYGVKSDVIHGNKSQGARQRALNDFKSGKVRALVATDIAARGIDVDGITHVIN FDLPNEPESYVHRIGRTARAGAAGIALSLCAPQEMPYLKAIEKVIKSRIDVDSTHAFHTPSMARAHGSHGHR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI301171475, Length=367, Percent_Identity=43.0517711171662, Blast_Score=279, Evalue=3e-75, Organism=Homo sapiens, GI87196351, Length=367, Percent_Identity=43.0517711171662, Blast_Score=278, Evalue=4e-75, Organism=Homo sapiens, GI301171467, Length=367, Percent_Identity=43.0517711171662, Blast_Score=278, Evalue=5e-75, Organism=Homo sapiens, GI169881239, Length=379, Percent_Identity=42.4802110817942, Blast_Score=278, Evalue=5e-75, Organism=Homo sapiens, GI13514809, Length=379, Percent_Identity=42.4802110817942, Blast_Score=278, Evalue=5e-75, Organism=Homo sapiens, GI262118318, Length=362, Percent_Identity=41.4364640883978, Blast_Score=265, Evalue=7e-71, Organism=Homo sapiens, GI262231852, Length=362, Percent_Identity=41.4364640883978, Blast_Score=264, Evalue=1e-70, Organism=Homo sapiens, GI216548263, Length=362, Percent_Identity=41.4364640883978, Blast_Score=264, Evalue=1e-70, Organism=Homo sapiens, GI13518015, Length=362, Percent_Identity=41.4364640883978, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI224593278, Length=368, Percent_Identity=41.5760869565217, Blast_Score=259, Evalue=2e-69, Organism=Homo sapiens, GI20149629, Length=368, Percent_Identity=38.0434782608696, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI148613856, Length=350, Percent_Identity=40.8571428571429, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI38201710, Length=350, Percent_Identity=40.8571428571429, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI31542656, Length=378, Percent_Identity=39.1534391534392, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI222352149, Length=334, Percent_Identity=41.6167664670659, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=37.6404494382022, Blast_Score=242, Evalue=4e-64, Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=37.8947368421053, Blast_Score=242, Evalue=4e-64, Organism=Homo sapiens, GI4758138, Length=350, Percent_Identity=39.1428571428571, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI7661920, Length=368, Percent_Identity=36.4130434782609, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI55749865, Length=340, Percent_Identity=37.6470588235294, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI41327773, Length=350, Percent_Identity=40, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI45446747, Length=359, Percent_Identity=37.3259052924791, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI45446743, Length=359, Percent_Identity=37.3259052924791, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI164419743, Length=358, Percent_Identity=37.7094972067039, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI51094101, Length=358, Percent_Identity=37.7094972067039, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=35.5978260869565, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI188035877, Length=352, Percent_Identity=36.9318181818182, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI41327779, Length=363, Percent_Identity=36.6391184573003, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=34.6883468834688, Blast_Score=206, Evalue=2e-53, Organism=Homo sapiens, GI83700235, Length=369, Percent_Identity=34.6883468834688, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI164664518, Length=372, Percent_Identity=30.6451612903226, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI13129006, Length=387, Percent_Identity=32.8165374677003, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI13514831, Length=360, Percent_Identity=35, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI50659095, Length=387, Percent_Identity=33.5917312661499, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI38327634, Length=375, Percent_Identity=34.6666666666667, Blast_Score=191, Evalue=7e-49, Organism=Homo sapiens, GI21040371, Length=350, Percent_Identity=30.5714285714286, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI4758112, Length=350, Percent_Identity=30.8571428571429, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI18375623, Length=350, Percent_Identity=30.8571428571429, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38569503, Length=354, Percent_Identity=32.7683615819209, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI164419732, Length=372, Percent_Identity=32.5268817204301, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI38569505, Length=354, Percent_Identity=32.7683615819209, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=31.3131313131313, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI8922886, Length=380, Percent_Identity=32.1052631578947, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI6005743, Length=380, Percent_Identity=31.5789473684211, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI256223453, Length=362, Percent_Identity=30.6629834254144, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI17505907, Length=400, Percent_Identity=30.75, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI62241022, Length=364, Percent_Identity=31.3186813186813, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI62241024, Length=344, Percent_Identity=31.6860465116279, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=30.6122448979592, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI9966805, Length=332, Percent_Identity=32.5301204819277, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI154759257, Length=411, Percent_Identity=29.1970802919708, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI256773275, Length=397, Percent_Identity=30.2267002518892, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI20336298, Length=202, Percent_Identity=37.6237623762376, Blast_Score=115, Evalue=8e-26, Organism=Escherichia coli, GI1787016, Length=369, Percent_Identity=52.5745257452574, Blast_Score=354, Evalue=6e-99, Organism=Escherichia coli, GI87082221, Length=366, Percent_Identity=41.8032786885246, Blast_Score=267, Evalue=8e-73, Organism=Escherichia coli, GI1790214, Length=374, Percent_Identity=38.7700534759358, Blast_Score=246, Evalue=2e-66, Organism=Escherichia coli, GI1788930, Length=360, Percent_Identity=41.3888888888889, Blast_Score=244, Evalue=5e-66, Organism=Escherichia coli, GI1787605, Length=376, Percent_Identity=38.2978723404255, Blast_Score=243, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17555296, Length=369, Percent_Identity=40.1084010840108, Blast_Score=263, Evalue=9e-71, Organism=Caenorhabditis elegans, GI17510309, Length=349, Percent_Identity=42.1203438395415, Blast_Score=251, Evalue=3e-67, Organism=Caenorhabditis elegans, GI17510307, Length=349, Percent_Identity=42.1203438395415, Blast_Score=251, Evalue=3e-67, Organism=Caenorhabditis elegans, GI71995514, Length=349, Percent_Identity=42.1203438395415, Blast_Score=251, Evalue=5e-67, Organism=Caenorhabditis elegans, GI115533224, Length=344, Percent_Identity=41.5697674418605, Blast_Score=251, Evalue=7e-67, Organism=Caenorhabditis elegans, GI17507945, Length=356, Percent_Identity=40.4494382022472, Blast_Score=247, Evalue=6e-66, Organism=Caenorhabditis elegans, GI32565321, Length=374, Percent_Identity=39.0374331550802, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI71987143, Length=370, Percent_Identity=35.6756756756757, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71995718, Length=365, Percent_Identity=39.4520547945205, Blast_Score=238, Evalue=3e-63, Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=37.1273712737127, Blast_Score=238, Evalue=4e-63, Organism=Caenorhabditis elegans, GI86570094, Length=337, Percent_Identity=39.4658753709199, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=36.8563685636856, Blast_Score=237, Evalue=6e-63, Organism=Caenorhabditis elegans, GI17510559, Length=387, Percent_Identity=34.3669250645995, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=34.1269841269841, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=34.1269841269841, Blast_Score=218, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17507881, Length=399, Percent_Identity=36.5914786967419, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=36.8563685636856, Blast_Score=215, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17552114, Length=369, Percent_Identity=31.1653116531165, Blast_Score=214, Evalue=5e-56, Organism=Caenorhabditis elegans, GI71999646, Length=361, Percent_Identity=34.9030470914127, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI71999644, Length=361, Percent_Identity=34.9030470914127, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17537549, Length=348, Percent_Identity=37.0689655172414, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17552642, Length=367, Percent_Identity=35.6948228882834, Blast_Score=204, Evalue=8e-53, Organism=Caenorhabditis elegans, GI17507879, Length=369, Percent_Identity=35.7723577235772, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17509811, Length=353, Percent_Identity=37.1104815864023, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17505370, Length=371, Percent_Identity=36.9272237196765, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71982858, Length=350, Percent_Identity=32.2857142857143, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71990816, Length=354, Percent_Identity=33.8983050847458, Blast_Score=181, Evalue=9e-46, Organism=Caenorhabditis elegans, GI17553716, Length=367, Percent_Identity=29.9727520435967, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=34.0314136125654, Blast_Score=164, Evalue=6e-41, Organism=Caenorhabditis elegans, GI25148203, Length=409, Percent_Identity=26.8948655256724, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=33.160621761658, Blast_Score=157, Evalue=7e-39, Organism=Caenorhabditis elegans, GI193206561, Length=339, Percent_Identity=34.2182890855457, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=33.1578947368421, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17556951, Length=359, Percent_Identity=30.9192200557103, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI25148291, Length=346, Percent_Identity=29.7687861271676, Blast_Score=144, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17508543, Length=358, Percent_Identity=30.1675977653631, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17536099, Length=397, Percent_Identity=27.9596977329975, Blast_Score=141, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17536101, Length=397, Percent_Identity=27.9596977329975, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17536103, Length=397, Percent_Identity=27.9596977329975, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI25148205, Length=336, Percent_Identity=26.1904761904762, Blast_Score=124, Evalue=7e-29, Organism=Caenorhabditis elegans, GI71982862, Length=200, Percent_Identity=34, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI71997889, Length=357, Percent_Identity=27.7310924369748, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17557982, Length=359, Percent_Identity=25.6267409470752, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71987152, Length=95, Percent_Identity=42.1052631578947, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI32564293, Length=111, Percent_Identity=31.5315315315315, Blast_Score=68, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6325138, Length=379, Percent_Identity=41.688654353562, Blast_Score=277, Evalue=3e-75, Organism=Saccharomyces cerevisiae, GI6321856, Length=375, Percent_Identity=40.5333333333333, Blast_Score=274, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6324778, Length=380, Percent_Identity=40.5263157894737, Blast_Score=271, Evalue=1e-73, Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=42.5770308123249, Blast_Score=259, Evalue=3e-70, Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=36.7231638418079, Blast_Score=238, Evalue=9e-64, Organism=Saccharomyces cerevisiae, GI6321360, Length=337, Percent_Identity=42.433234421365, Blast_Score=236, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6320224, Length=374, Percent_Identity=34.2245989304813, Blast_Score=226, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6320041, Length=367, Percent_Identity=33.7874659400545, Blast_Score=219, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6320173, Length=421, Percent_Identity=32.0665083135392, Blast_Score=213, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6323947, Length=423, Percent_Identity=32.8605200945626, Blast_Score=206, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6321963, Length=403, Percent_Identity=34.4913151364764, Blast_Score=202, Evalue=9e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=363, Percent_Identity=36.0881542699724, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=34.4173441734417, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=34.4173441734417, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6320119, Length=376, Percent_Identity=32.7127659574468, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=33.4254143646409, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=361, Percent_Identity=32.1329639889197, Blast_Score=190, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6324620, Length=374, Percent_Identity=31.8181818181818, Blast_Score=179, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6321267, Length=358, Percent_Identity=34.0782122905028, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6320400, Length=391, Percent_Identity=32.2250639386189, Blast_Score=166, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6321111, Length=350, Percent_Identity=31.1428571428571, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=428, Percent_Identity=27.3364485981308, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=26.3922518159806, Blast_Score=143, Evalue=6e-35, Organism=Saccharomyces cerevisiae, GI6324366, Length=347, Percent_Identity=26.5129682997118, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6322876, Length=414, Percent_Identity=27.0531400966184, Blast_Score=113, Evalue=5e-26, Organism=Drosophila melanogaster, GI24584399, Length=357, Percent_Identity=39.2156862745098, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=41.3793103448276, Blast_Score=264, Evalue=8e-71, Organism=Drosophila melanogaster, GI281361218, Length=373, Percent_Identity=38.8739946380697, Blast_Score=264, Evalue=9e-71, Organism=Drosophila melanogaster, GI24644481, Length=373, Percent_Identity=38.8739946380697, Blast_Score=264, Evalue=9e-71, Organism=Drosophila melanogaster, GI24644487, Length=373, Percent_Identity=38.8739946380697, Blast_Score=264, Evalue=9e-71, Organism=Drosophila melanogaster, GI45551833, Length=373, Percent_Identity=38.8739946380697, Blast_Score=264, Evalue=9e-71, Organism=Drosophila melanogaster, GI24644485, Length=373, Percent_Identity=38.8739946380697, Blast_Score=264, Evalue=9e-71, Organism=Drosophila melanogaster, GI24644483, Length=373, Percent_Identity=38.8739946380697, Blast_Score=264, Evalue=9e-71, Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=41.3513513513514, Blast_Score=264, Evalue=9e-71, Organism=Drosophila melanogaster, GI24644479, Length=373, Percent_Identity=38.8739946380697, Blast_Score=263, Evalue=1e-70, Organism=Drosophila melanogaster, GI24585582, Length=368, Percent_Identity=39.6739130434783, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI18857967, Length=355, Percent_Identity=40.2816901408451, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI28574962, Length=351, Percent_Identity=39.8860398860399, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24642151, Length=342, Percent_Identity=40.3508771929825, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI21355075, Length=358, Percent_Identity=38.5474860335196, Blast_Score=245, Evalue=3e-65, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=38.2022471910112, Blast_Score=244, Evalue=5e-65, Organism=Drosophila melanogaster, GI24645031, Length=368, Percent_Identity=36.9565217391304, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24584994, Length=364, Percent_Identity=40.1098901098901, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24662330, Length=361, Percent_Identity=37.6731301939058, Blast_Score=231, Evalue=7e-61, Organism=Drosophila melanogaster, GI28575014, Length=358, Percent_Identity=36.8715083798883, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI17136814, Length=373, Percent_Identity=35.9249329758713, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24583281, Length=373, Percent_Identity=34.5844504021448, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI24583279, Length=373, Percent_Identity=34.5844504021448, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24582080, Length=368, Percent_Identity=35.054347826087, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24582078, Length=368, Percent_Identity=35.054347826087, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI17136248, Length=368, Percent_Identity=35.054347826087, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24582075, Length=368, Percent_Identity=35.054347826087, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=38.1410256410256, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=37.5661375661376, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI28571808, Length=374, Percent_Identity=32.8877005347594, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI28571809, Length=374, Percent_Identity=32.8877005347594, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI17647335, Length=360, Percent_Identity=30.5555555555556, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24642822, Length=395, Percent_Identity=32.4050632911392, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24581954, Length=369, Percent_Identity=30.0813008130081, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24581952, Length=369, Percent_Identity=30.0813008130081, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24581956, Length=369, Percent_Identity=30.0813008130081, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24643725, Length=396, Percent_Identity=29.7979797979798, Blast_Score=168, Evalue=6e-42, Organism=Drosophila melanogaster, GI24666101, Length=365, Percent_Identity=32.6027397260274, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24668515, Length=338, Percent_Identity=31.9526627218935, Blast_Score=151, Evalue=7e-37, Organism=Drosophila melanogaster, GI20130173, Length=460, Percent_Identity=26.5217391304348, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI17136666, Length=396, Percent_Identity=28.7878787878788, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI19920478, Length=342, Percent_Identity=29.5321637426901, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI18859659, Length=207, Percent_Identity=34.2995169082126, Blast_Score=111, Evalue=8e-25, Organism=Drosophila melanogaster, GI28571338, Length=207, Percent_Identity=34.2995169082126, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI24640164, Length=329, Percent_Identity=25.8358662613982, Blast_Score=102, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 42574; Mature: 42443
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFASLDLIEPLARAVTALGYTVATPIQAGAIPPQLLGRDVLGIAQTGTGKTASFVLPL CCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHCCCHHEEECCCCCCHHHHHHHH LQRLTKDPQPRVPGRPRALILTPTRELAQQITESIGDLGRTLSAIRCGVVVGGVDILRQT HHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RMVQRGLEILVATPGRLQDLMNRKAVDLRAIEVLVLDEADRMLDMGFAPAVKKIAAVLPR HHHHCCCEEEEECCHHHHHHHCCCCCCCEEEEEEEECCHHHHHHCCCHHHHHHHHHHCCC KRQTVMFSATLPNEVTGLVASLMNDPVRVEVAPAASVANRIDQRVLFVEQTNKRKLLLDL CCCEEEEEECCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHEEEEEECCCCHHHHHHH LGDARKVERAIVFTRTKHGANKLGIFLLEYGVKSDVIHGNKSQGARQRALNDFKSGKVRA HCCHHHHHHHHEEEECCCCCCHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE LVATDIAARGIDVDGITHVINFDLPNEPESYVHRIGRTARAGAAGIALSLCAPQEMPYLK EEEHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCHHCCCCCHHEEEECCCCCCHHHH AIEKVIKSRIDVDSTHAFHTPSMARAHGSHGHR HHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure TEFASLDLIEPLARAVTALGYTVATPIQAGAIPPQLLGRDVLGIAQTGTGKTASFVLPL CCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHCCCHHEEECCCCCCHHHHHHHH LQRLTKDPQPRVPGRPRALILTPTRELAQQITESIGDLGRTLSAIRCGVVVGGVDILRQT HHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RMVQRGLEILVATPGRLQDLMNRKAVDLRAIEVLVLDEADRMLDMGFAPAVKKIAAVLPR HHHHCCCEEEEECCHHHHHHHCCCCCCCEEEEEEEECCHHHHHHCCCHHHHHHHHHHCCC KRQTVMFSATLPNEVTGLVASLMNDPVRVEVAPAASVANRIDQRVLFVEQTNKRKLLLDL CCCEEEEEECCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHEEEEEECCCCHHHHHHH LGDARKVERAIVFTRTKHGANKLGIFLLEYGVKSDVIHGNKSQGARQRALNDFKSGKVRA HCCHHHHHHHHEEEECCCCCCHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE LVATDIAARGIDVDGITHVINFDLPNEPESYVHRIGRTARAGAAGIALSLCAPQEMPYLK EEEHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCHHCCCCCHHEEEECCCCCCHHHH AIEKVIKSRIDVDSTHAFHTPSMARAHGSHGHR HHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]