| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is folE [H]
Identifier: 83593167
GI number: 83593167
Start: 2129033
End: 2129665
Strand: Reverse
Name: folE [H]
Synonym: Rru_A1832
Alternate gene names: 83593167
Gene position: 2129665-2129033 (Counterclockwise)
Preceding gene: 83593168
Following gene: 83593166
Centisome position: 48.93
GC content: 64.61
Gene sequence:
>633_bases ATGGAAAAGACCTTGCTGTCGCGTGCGCAAAGCGGTGTGGAAGCCTTTGATGCGACGCCGTATTACAAGCCCGTCTCGGT CGGAGAGGCCGAGGCGGCCATCGCCGTGCTTCTGCGCTATATCGGCGAGGATCCGACGCGCGAGGGATTGGTTGAAACCC CGGCCCGCTTCATTCGCGCCTGCGGCCATCATTTCGCCGGCTATGCCCAAGATCCCCTGCGCATCCTCGCCACCACCTTT TCCGAAAGCGCCGGCTACGCCGGGATGATCCTGCTGCGCGACATCCGCTTTGAGGCCTTTTGCGAGCACCATTTGGCCCC GATCATCGGCAAGGCCCATGTCGCCTATATGCCGAACGACCGCGTGGTCGGGCTGTCGAAGCTCGCCCGGGTTGTCGATG TCTTCGCCAAGCGCCTGCAACTGCAAGAGCGCATGACCATGCAGATCGCCACGGCGATCGAGGCCGCCCTGGCGCCGCGC GGGGTGGCGGTGCTGATCGAGTCCGAGCATCACTGCATGAGCACGCGCGGCGCCTATAAGCCGGGATCGACCATGGTGAC CTCGGTGACGACCGGTTGCTTCGAAGCCGACGGCGCGCCGCGACGGGAGTTTTTCGAGGCCGTTCGCGCCTGA
Upstream 100 bases:
>100_bases CTTGAGCGCGCCTCTCTCGCCCACTCGTTCCGCCCCGTTCCCTTCCCCTCTCGCCAGGATCGATCCACCGCCTGTCCCTT CGTGAACGGAGCCGACGCCC
Downstream 100 bases:
>100_bases CCGACGCGGCGCCTTGCGCCGTTTTCCATCTTTCTGAGGTCGAGGTCAGCCAATGTTTGAAATAACCCGAAAAATCGAAA TAGACGCCGGCCATCGCATT
Product: GTP cyclohydrolase
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MEKTLLSRAQSGVEAFDATPYYKPVSVGEAEAAIAVLLRYIGEDPTREGLVETPARFIRACGHHFAGYAQDPLRILATTF SESAGYAGMILLRDIRFEAFCEHHLAPIIGKAHVAYMPNDRVVGLSKLARVVDVFAKRLQLQERMTMQIATAIEAALAPR GVAVLIESEHHCMSTRGAYKPGSTMVTSVTTGCFEADGAPRREFFEAVRA
Sequences:
>Translated_210_residues MEKTLLSRAQSGVEAFDATPYYKPVSVGEAEAAIAVLLRYIGEDPTREGLVETPARFIRACGHHFAGYAQDPLRILATTF SESAGYAGMILLRDIRFEAFCEHHLAPIIGKAHVAYMPNDRVVGLSKLARVVDVFAKRLQLQERMTMQIATAIEAALAPR GVAVLIESEHHCMSTRGAYKPGSTMVTSVTTGCFEADGAPRREFFEAVRA >Mature_210_residues MEKTLLSRAQSGVEAFDATPYYKPVSVGEAEAAIAVLLRYIGEDPTREGLVETPARFIRACGHHFAGYAQDPLRILATTF SESAGYAGMILLRDIRFEAFCEHHLAPIIGKAHVAYMPNDRVVGLSKLARVVDVFAKRLQLQERMTMQIATAIEAALAPR GVAVLIESEHHCMSTRGAYKPGSTMVTSVTTGCFEADGAPRREFFEAVRA
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=180, Percent_Identity=43.3333333333333, Blast_Score=157, Evalue=9e-39, Organism=Homo sapiens, GI4503949, Length=180, Percent_Identity=43.3333333333333, Blast_Score=157, Evalue=9e-39, Organism=Homo sapiens, GI66932970, Length=147, Percent_Identity=42.1768707482993, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI66932972, Length=138, Percent_Identity=44.2028985507246, Blast_Score=125, Evalue=2e-29, Organism=Escherichia coli, GI1788476, Length=201, Percent_Identity=35.3233830845771, Blast_Score=112, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17560486, Length=173, Percent_Identity=42.7745664739884, Blast_Score=156, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6321706, Length=174, Percent_Identity=43.6781609195402, Blast_Score=155, Evalue=3e-39, Organism=Drosophila melanogaster, GI24656782, Length=176, Percent_Identity=42.6136363636364, Blast_Score=140, Evalue=6e-34, Organism=Drosophila melanogaster, GI24656796, Length=176, Percent_Identity=42.6136363636364, Blast_Score=139, Evalue=1e-33, Organism=Drosophila melanogaster, GI24656791, Length=176, Percent_Identity=42.6136363636364, Blast_Score=139, Evalue=1e-33,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 22960; Mature: 22960
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTLLSRAQSGVEAFDATPYYKPVSVGEAEAAIAVLLRYIGEDPTREGLVETPARFIRA CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH CGHHFAGYAQDPLRILATTFSESAGYAGMILLRDIRFEAFCEHHLAPIIGKAHVAYMPND HHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC RVVGLSKLARVVDVFAKRLQLQERMTMQIATAIEAALAPRGVAVLIESEHHCMSTRGAYK CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCC PGSTMVTSVTTGCFEADGAPRREFFEAVRA CCCCCHHHHHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MEKTLLSRAQSGVEAFDATPYYKPVSVGEAEAAIAVLLRYIGEDPTREGLVETPARFIRA CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH CGHHFAGYAQDPLRILATTFSESAGYAGMILLRDIRFEAFCEHHLAPIIGKAHVAYMPND HHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC RVVGLSKLARVVDVFAKRLQLQERMTMQIATAIEAALAPRGVAVLIESEHHCMSTRGAYK CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCC PGSTMVTSVTTGCFEADGAPRREFFEAVRA CCCCCHHHHHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA