| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593030
Identifier: 83593030
GI number: 83593030
Start: 1986594
End: 1987034
Strand: Reverse
Name: 83593030
Synonym: Rru_A1695
Alternate gene names: NA
Gene position: 1987034-1986594 (Counterclockwise)
Preceding gene: 83593031
Following gene: 83593026
Centisome position: 45.65
GC content: 65.08
Gene sequence:
>441_bases ATGAAACACGACAAACGCATCGGGTTGCTCGCCCTGGCCGTGCTGACCTTGGCCAAGGCGCCGGCCGTCGCCGGGGAAAC CAGCGTCACCGTCACCAAATCACCAAGCTGCGGCTGCTGCCAGGGCTGGGTCGATCACATGATCGACAACGGCTATGAGG TGAGGGTGATCGAAACCGAGGATCTAACCCCGGTCAAGCACCGCCTAGGCGTTCCCGACAGCCTGGGATCGTGCCATACC GCCGAGATCGGCGGCTATGTCATCGAGGGCCATGTGCCCGCCGCCACCATCGGCCGGCTGTTGGCCGAGAAACCCCGGGT GAGCGGTATCGCCGCGCCGGGCATGCCCCAGGGCTCGCCCGGCATGGCGGGCGAGCGCGAACCCTTTATGGTGATGAGCT TCGGCCCGGCCGGCATCTTGCCGTTCCAAAAGATCGACTAA
Upstream 100 bases:
>100_bases GCCTGGCAGGCTCCGGCCACCGATATGCCGATGGAGATGCCGATGGACCACGGGGATATGGGCCATGGGACGGCGCATTA GGCAGGGAAGGGACCAAACC
Downstream 100 bases:
>100_bases GCGACGGCCGGACCCGATCCCATTACCCGATCCCATCGGGGGCCGGGTCCGGCCTTAAGCCACGGTCGTTAGGATCTTAA CCATTCTTAATGATCCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKHDKRIGLLALAVLTLAKAPAVAGETSVTVTKSPSCGCCQGWVDHMIDNGYEVRVIETEDLTPVKHRLGVPDSLGSCHT AEIGGYVIEGHVPAATIGRLLAEKPRVSGIAAPGMPQGSPGMAGEREPFMVMSFGPAGILPFQKID
Sequences:
>Translated_146_residues MKHDKRIGLLALAVLTLAKAPAVAGETSVTVTKSPSCGCCQGWVDHMIDNGYEVRVIETEDLTPVKHRLGVPDSLGSCHT AEIGGYVIEGHVPAATIGRLLAEKPRVSGIAAPGMPQGSPGMAGEREPFMVMSFGPAGILPFQKID >Mature_146_residues MKHDKRIGLLALAVLTLAKAPAVAGETSVTVTKSPSCGCCQGWVDHMIDNGYEVRVIETEDLTPVKHRLGVPDSLGSCHT AEIGGYVIEGHVPAATIGRLLAEKPRVSGIAAPGMPQGSPGMAGEREPFMVMSFGPAGILPFQKID
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15288; Mature: 15288
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHDKRIGLLALAVLTLAKAPAVAGETSVTVTKSPSCGCCQGWVDHMIDNGYEVRVIETE CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECC DLTPVKHRLGVPDSLGSCHTAEIGGYVIEGHVPAATIGRLLAEKPRVSGIAAPGMPQGSP CCCHHHHHCCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHHCCCCCCCEECCCCCCCCC GMAGEREPFMVMSFGPAGILPFQKID CCCCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKHDKRIGLLALAVLTLAKAPAVAGETSVTVTKSPSCGCCQGWVDHMIDNGYEVRVIETE CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECC DLTPVKHRLGVPDSLGSCHTAEIGGYVIEGHVPAATIGRLLAEKPRVSGIAAPGMPQGSP CCCHHHHHCCCCCCCCCCEEECCCCEEEECCCCHHHHHHHHHCCCCCCCEECCCCCCCCC GMAGEREPFMVMSFGPAGILPFQKID CCCCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA