| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593031
Identifier: 83593031
GI number: 83593031
Start: 1987054
End: 1987596
Strand: Reverse
Name: 83593031
Synonym: Rru_A1696
Alternate gene names: NA
Gene position: 1987596-1987054 (Counterclockwise)
Preceding gene: 83593032
Following gene: 83593030
Centisome position: 45.66
GC content: 63.35
Gene sequence:
>543_bases ATGTCCATGACCCATTACATGGAGCTTCTTGCCACCAATCAGCCGTGGAACCTGCTGCTGTTCATGGCGATTCCGGTGAT TTTGGCCGAAACCATCGCCGTCACCGAACTTTACCTGCTCTACACCCGCCGCTACGATGGCTGGGTTCGCCAGATCAACC GCCTTGCCGGCATGGTGGTCGGCGTCTATTTCACCGGCGTCTTCTTCTATCTGCTGGCCAGCGCCGTGCTGCCGCTGACC ACCTCGGGCGGTTGGCGCGGCTGGATCGACGCCGTGGCCGTCGGCTTCTATCTGCTGGGCATCGTGCCGCTGGGCGGCAT CGCCTTGCTGGAATTCAAGGTGATCGGCGGCCGCCGCGACGAGCATGGGCGGATGATGATCCACGCCGCCCTGGTCGGTC TGTTCCTGATCGTCGCCCATATCGCCATGATCTTCGGCATGCTCGACCCGACCCTGGGCGGCGCCTGGCAGGCTCCGGCC ACCGATATGCCGATGGAGATGCCGATGGACCACGGGGATATGGGCCATGGGACGGCGCATTAG
Upstream 100 bases:
>100_bases CGCCGCGCCTTTGATCGGTTCGTTTTCTTCCCCGTAAGACCAGGGCAGGGCCTTCGCGCCCTGTCGGAAGACTCGTTGCC GTTCAAAGGAGTGCGTTTTG
Downstream 100 bases:
>100_bases GCAGGGAAGGGACCAAACCATGAAACACGACAAACGCATCGGGTTGCTCGCCCTGGCCGTGCTGACCTTGGCCAAGGCGC CGGCCGTCGCCGGGGAAACC
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSMTHYMELLATNQPWNLLLFMAIPVILAETIAVTELYLLYTRRYDGWVRQINRLAGMVVGVYFTGVFFYLLASAVLPLT TSGGWRGWIDAVAVGFYLLGIVPLGGIALLEFKVIGGRRDEHGRMMIHAALVGLFLIVAHIAMIFGMLDPTLGGAWQAPA TDMPMEMPMDHGDMGHGTAH
Sequences:
>Translated_180_residues MSMTHYMELLATNQPWNLLLFMAIPVILAETIAVTELYLLYTRRYDGWVRQINRLAGMVVGVYFTGVFFYLLASAVLPLT TSGGWRGWIDAVAVGFYLLGIVPLGGIALLEFKVIGGRRDEHGRMMIHAALVGLFLIVAHIAMIFGMLDPTLGGAWQAPA TDMPMEMPMDHGDMGHGTAH >Mature_179_residues SMTHYMELLATNQPWNLLLFMAIPVILAETIAVTELYLLYTRRYDGWVRQINRLAGMVVGVYFTGVFFYLLASAVLPLTT SGGWRGWIDAVAVGFYLLGIVPLGGIALLEFKVIGGRRDEHGRMMIHAALVGLFLIVAHIAMIFGMLDPTLGGAWQAPAT DMPMEMPMDHGDMGHGTAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19840; Mature: 19709
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTHYMELLATNQPWNLLLFMAIPVILAETIAVTELYLLYTRRYDGWVRQINRLAGMVV CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVYFTGVFFYLLASAVLPLTTSGGWRGWIDAVAVGFYLLGIVPLGGIALLEFKVIGGRRD HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCC EHGRMMIHAALVGLFLIVAHIAMIFGMLDPTLGGAWQAPATDMPMEMPMDHGDMGHGTAH CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SMTHYMELLATNQPWNLLLFMAIPVILAETIAVTELYLLYTRRYDGWVRQINRLAGMVV CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVYFTGVFFYLLASAVLPLTTSGGWRGWIDAVAVGFYLLGIVPLGGIALLEFKVIGGRRD HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCC EHGRMMIHAALVGLFLIVAHIAMIFGMLDPTLGGAWQAPATDMPMEMPMDHGDMGHGTAH CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA