| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592981
Identifier: 83592981
GI number: 83592981
Start: 1934364
End: 1934663
Strand: Direct
Name: 83592981
Synonym: Rru_A1646
Alternate gene names: NA
Gene position: 1934364-1934663 (Clockwise)
Preceding gene: 83592980
Following gene: 83592983
Centisome position: 44.44
GC content: 59.33
Gene sequence:
>300_bases ATGGCAACCAAGGTGCGCATCTTTCAGCCGGCCAAAACGGCCATGCAATCGGGCCGCGCCAATACCAAACGCTGGGTCCT GGAGTTTGAACCGACCGAAAAGAAGGTCCATGACGATCTGATGGGCTGGGTCGGCTCGGGCGACATGAACGGCCAGCTGC GGCTGTTCTTCGCCACCCGCAAGGACGCCGAAAGCTACGCCAAGCGCAAGGGCTTCACCTATACCGCCCAGGACGCCAAC CCCCGCGTGATCAAGCCGAAGTCCTATTCCGACAACTTCGCCTATCACAAGATCTCCTAA
Upstream 100 bases:
>100_bases CCGAAAGCCGGAGGTTCGAATCCTCTCGCCCCGACCAGCCCCCCCAAAAGGGCCTTTGGCGCCCCCGACCCGGAGACCGT CGACAGGGAGACGAGCGGTA
Downstream 100 bases:
>100_bases TCGGCTTTTCAAGCGCCCTTAGCTCAGTTGGATAGAGCACTCGCCTTCTAAGCGAGATGTCGCTGGTTCGAATCCAGCAG GGCGCGCCATTTCCCTACAG
Product: ETC complex I subunit region
Products: NA
Alternate protein names: ETC Complex I Subunit Conserved Region; NADH-Ubiquinone Oxidoreductase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase-Related Protein; NADH-Ubiquinone Oxidoreductase Subunit; NADH Dehydrogenase; ETC Complex I Subunit Conserved Region Superfamily; NDUFA4 Family NADH Ubiquinone Oxidoreductase Subunit; ETC Complex I Subunit Region Protein; NADH Dehydrogenase Fe-S; ETC Complex I Subunit Protein; NADH Dehydrogenase Subunit; NADH-Ubiquinone Oxidoreductase Family Protein; NADH Dehydrogenase Iron-Sulfur ; ETC Complex Subunit I Conserved Region Protein; Etc Complex I Subunit Conserved Region; NADH-Quinone Oxidoreductase; NADH-Ubiquinone Oxidoreductase Protein
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MATKVRIFQPAKTAMQSGRANTKRWVLEFEPTEKKVHDDLMGWVGSGDMNGQLRLFFATRKDAESYAKRKGFTYTAQDAN PRVIKPKSYSDNFAYHKIS
Sequences:
>Translated_99_residues MATKVRIFQPAKTAMQSGRANTKRWVLEFEPTEKKVHDDLMGWVGSGDMNGQLRLFFATRKDAESYAKRKGFTYTAQDAN PRVIKPKSYSDNFAYHKIS >Mature_98_residues ATKVRIFQPAKTAMQSGRANTKRWVLEFEPTEKKVHDDLMGWVGSGDMNGQLRLFFATRKDAESYAKRKGFTYTAQDANP RVIKPKSYSDNFAYHKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4505369, Length=94, Percent_Identity=41.4893617021277, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI115533653, Length=98, Percent_Identity=34.6938775510204, Blast_Score=69, Evalue=4e-13, Organism=Drosophila melanogaster, GI18860539, Length=95, Percent_Identity=36.8421052631579, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11364; Mature: 11233
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKVRIFQPAKTAMQSGRANTKRWVLEFEPTEKKVHDDLMGWVGSGDMNGQLRLFFATR CCCEEEEECCHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEC KDAESYAKRKGFTYTAQDANPRVIKPKSYSDNFAYHKIS CCHHHHHHHCCCEEEECCCCCCEECCCCCCCCEEEEECC >Mature Secondary Structure ATKVRIFQPAKTAMQSGRANTKRWVLEFEPTEKKVHDDLMGWVGSGDMNGQLRLFFATR CCEEEEECCHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEC KDAESYAKRKGFTYTAQDANPRVIKPKSYSDNFAYHKIS CCHHHHHHHCCCEEEECCCCCCEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA