| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592980
Identifier: 83592980
GI number: 83592980
Start: 1933506
End: 1934138
Strand: Direct
Name: 83592980
Synonym: Rru_A1645
Alternate gene names: NA
Gene position: 1933506-1934138 (Clockwise)
Preceding gene: 83592966
Following gene: 83592981
Centisome position: 44.42
GC content: 69.19
Gene sequence:
>633_bases ATGGGGGTAGGCCCCCTGCCGGGACGGAAAGGAAGCAAGATGATGCGACGGTGGCCAAAACTGGGGCGACGCGATCTGGC CCTGTGGCTGGGCGGCGCGGTCTGTCTGGCGCTGACCGTGCCAGCGCCCTCGGCCGCCTGGGCGCAACCCCAGCCGTCGG TGGTCCGGCCGAACCTTGGTCTGGACGCCCCCCCCGACACCCGGGGGCGGTTCGCTAAATCGAAGCTGACCATCGTGACC GACGACGGCCGCAGCCTGCCCTTTTTCGTGGAACTGGCGACCACGGCCAATCAACGGGCCCTGGGCCTGATGTTCCGCAA GGATCTGGCTGCCGATGCCGGCATGCTGTTCGTCTGGGACGAGCCGGGGCAGCGGGCGATGTGGATGAAGAACACGCTGA TCGGCCTTGATATGCTGTTTCTTGACGCCGAGGGGCTGGTGGTCGGCATCGCCGAGAACGCCGAGCCGGGCAGCCTGCGC CATATCGAAGCCCCCGAACCCTGCGTCGGCGTGCTGGAACTCAACGCCGGAACCACCCGGCTGCTGTCGATCGACCCCGG GGATCGGGTGGTTCATCCGCTGTTGGGCGGCCCGGCCGAGGGGGCGATGGGCGCCGCCCGCCCCAGCCGCTGA
Upstream 100 bases:
>100_bases GATGCCCCGGCCAAGCGAAAAAGCGCCATCCGCCCTTGGTTCCGCCACCTTTTCGCGGCAGGGTAAGCCGGTGGACGACG ATCGGGGACGATCGTGGACG
Downstream 100 bases:
>100_bases CGGCGGTTTGGGCGCGATCGTGAAAATCGGCCTTGCCCCTGGGCGACGGCCGCCATACTTTGCGGCTGATCCGGGTCATC GCCGTCGGGGCGTAGCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MGVGPLPGRKGSKMMRRWPKLGRRDLALWLGGAVCLALTVPAPSAAWAQPQPSVVRPNLGLDAPPDTRGRFAKSKLTIVT DDGRSLPFFVELATTANQRALGLMFRKDLAADAGMLFVWDEPGQRAMWMKNTLIGLDMLFLDAEGLVVGIAENAEPGSLR HIEAPEPCVGVLELNAGTTRLLSIDPGDRVVHPLLGGPAEGAMGAARPSR
Sequences:
>Translated_210_residues MGVGPLPGRKGSKMMRRWPKLGRRDLALWLGGAVCLALTVPAPSAAWAQPQPSVVRPNLGLDAPPDTRGRFAKSKLTIVT DDGRSLPFFVELATTANQRALGLMFRKDLAADAGMLFVWDEPGQRAMWMKNTLIGLDMLFLDAEGLVVGIAENAEPGSLR HIEAPEPCVGVLELNAGTTRLLSIDPGDRVVHPLLGGPAEGAMGAARPSR >Mature_209_residues GVGPLPGRKGSKMMRRWPKLGRRDLALWLGGAVCLALTVPAPSAAWAQPQPSVVRPNLGLDAPPDTRGRFAKSKLTIVTD DGRSLPFFVELATTANQRALGLMFRKDLAADAGMLFVWDEPGQRAMWMKNTLIGLDMLFLDAEGLVVGIAENAEPGSLRH IEAPEPCVGVLELNAGTTRLLSIDPGDRVVHPLLGGPAEGAMGAARPSR
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22392; Mature: 22261
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVGPLPGRKGSKMMRRWPKLGRRDLALWLGGAVCLALTVPAPSAAWAQPQPSVVRPNLG CCCCCCCCCCCHHHHHHHHHCCCCEEHHHCCCEEEEEEECCCCCCCCCCCCCCEECCCCC LDAPPDTRGRFAKSKLTIVTDDGRSLPFFVELATTANQRALGLMFRKDLAADAGMLFVWD CCCCCCCCCCEECCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEC EPGQRAMWMKNTLIGLDMLFLDAEGLVVGIAENAEPGSLRHIEAPEPCVGVLELNAGTTR CCCCEEEEHHHHHHEEEEEEEECCCEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCEE LLSIDPGDRVVHPLLGGPAEGAMGAARPSR EEEECCCCCEEHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GVGPLPGRKGSKMMRRWPKLGRRDLALWLGGAVCLALTVPAPSAAWAQPQPSVVRPNLG CCCCCCCCCCHHHHHHHHHCCCCEEHHHCCCEEEEEEECCCCCCCCCCCCCCEECCCCC LDAPPDTRGRFAKSKLTIVTDDGRSLPFFVELATTANQRALGLMFRKDLAADAGMLFVWD CCCCCCCCCCEECCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEC EPGQRAMWMKNTLIGLDMLFLDAEGLVVGIAENAEPGSLRHIEAPEPCVGVLELNAGTTR CCCCEEEEHHHHHHEEEEEEEECCCEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCEE LLSIDPGDRVVHPLLGGPAEGAMGAARPSR EEEECCCCCEEHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA