| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592983
Identifier: 83592983
GI number: 83592983
Start: 1940050
End: 1940394
Strand: Direct
Name: 83592983
Synonym: Rru_A1648
Alternate gene names: NA
Gene position: 1940050-1940394 (Clockwise)
Preceding gene: 83592981
Following gene: 83592984
Centisome position: 44.57
GC content: 65.8
Gene sequence:
>345_bases ATGCCCGCACCAGCCAACCGCAAGGATCATCCTCTCTCCATGCGTCTGCCCGATGCCGATCTCGCCTTGATCGACCGGGC CGCCACTCTGCGTGGTCGATCGCGGACGGATTTCGTGCGCGAGGCGGCGGTGCGGGCCGCCGAAGAGGTGGTGGATGGGT GCGGTCTTGATCCGCATGTCGGAAGGGGGCTTGGCCGACTTCAAAGCGGCGCTATCGGCACCCGCCGCGTCCGTTCCGGG GATGGTCGAGATTCTAAGCCGATCGGCCCTTTGGGAAGGCGGGGACGACCGGACCTGATGGACCATGTCGCTCTCGTCGC CAGAACCCTTGAATGCCGCCCATGA
Upstream 100 bases:
>100_bases CGCCATATCGCTTCGTGCCATTCGGTGCCGGCACGTGTTGGTATTGTAAAATACGCTACCAATGCGTATCTCCGTTGGTC CGTCCTGAGGAGTCAGCGCC
Downstream 100 bases:
>100_bases TCTTTCCGGCTTCGCCTGCGGCAAGCCCGCCCTTGATCCTTGGCTGAAAACCCGGGCCCTCTCCAAGCAGGAAAAGGGCT TCACCGTTGTGATGGTCGTT
Product: helix-turn-helix protein, CopG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MPAPANRKDHPLSMRLPDADLALIDRAATLRGRSRTDFVREAAVRAAEEVVDGCGLDPHVGRGLGRLQSGAIGTRRVRSG DGRDSKPIGPLGRRGRPDLMDHVALVARTLECRP
Sequences:
>Translated_114_residues MPAPANRKDHPLSMRLPDADLALIDRAATLRGRSRTDFVREAAVRAAEEVVDGCGLDPHVGRGLGRLQSGAIGTRRVRSG DGRDSKPIGPLGRRGRPDLMDHVALVARTLECRP >Mature_113_residues PAPANRKDHPLSMRLPDADLALIDRAATLRGRSRTDFVREAAVRAAEEVVDGCGLDPHVGRGLGRLQSGAIGTRRVRSGD GRDSKPIGPLGRRGRPDLMDHVALVARTLECRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12295; Mature: 12164
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPANRKDHPLSMRLPDADLALIDRAATLRGRSRTDFVREAAVRAAEEVVDGCGLDPHV CCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH GRGLGRLQSGAIGTRRVRSGDGRDSKPIGPLGRRGRPDLMDHVALVARTLECRP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure PAPANRKDHPLSMRLPDADLALIDRAATLRGRSRTDFVREAAVRAAEEVVDGCGLDPHV CCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH GRGLGRLQSGAIGTRRVRSGDGRDSKPIGPLGRRGRPDLMDHVALVARTLECRP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA