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The map label for this gene is dadA [H]

Identifier: 83592881

GI number: 83592881

Start: 1821334

End: 1822593

Strand: Reverse

Name: dadA [H]

Synonym: Rru_A1546

Alternate gene names: 83592881

Gene position: 1822593-1821334 (Counterclockwise)

Preceding gene: 83592889

Following gene: 83592880

Centisome position: 41.87

GC content: 68.25

Gene sequence:

>1260_bases
GTGGATGTTCTTGTGCTGGGGGCGGGGTTGATCGGAACGACCTCGGCCCATTTCCTTGCCCGGGCTGGCCATGACGTAAC
GGTGATCGATCGTCAGCCCGGCCCCGGACTGGAAACCAGTTTCGCCAATGGCGGCCAGATCTCGGCCTGTCACACCCAAC
CCTGGGCCCATCCCGAAACGCCGCTGATGGCCCTGCGCTGGCTGGGGCGCGCCGATGCGCCGCTGGTGTTCGACTGGGCG
CGCTGGGACCCGGCGCTCTGGGTTTGGGGCCTGCGCTTCCTAGCCAATTGCACGCTGTCGGCCTATGACCGCAATATGGA
GCGCGCCGTCCGCGTCGCCCTTTATAGTCGGAGTGTTCTCAAAGAGTTACGGGCCGAAACCGGCTTGCGGTATGACGAAC
GCACGCGCGGCATCCTCAAGATCTATCGCGATCAGGGCGATTTCGACAAAGGCTTGCGGGCCATGGAGAAAACCGCGGCC
TGGGGCCTGCGCCAAAGCGCCTGCCCGGCCGCGCGATGCCTGGAGCTGGAACCGGCCCTGGCGACCGGCGGCGTCCGGCT
GGCCGGGGGGATTCTCGCCGCCGAGGACGAAAGCGGCGACGCCCATCTCTTCACCCAGGGTCTGGCCGCGCTCTCGGCGG
CCAAAGGCGTGCGCTTTCTTGGCGAGACGACGATCACCGGGCTGCGCCTAGAGGGCCGACGGGTCGCCGAGGTGCTGACC
AGCCGGGGTCCCTTGCGCGCCGATACCATCGTGCTGGCGGCGGGCAGTTTCTCGCCCGGCCTCGCCCGCACCATCGGCCT
GCGCCTGCCGGTCTATCCGGCCAAGGGCTATTCGATCACCCTTGATGTCGACGGGGCGGGGCAAGGGGCGCCCACCCTGT
CGATCACCGATGAAGCCAGCAAGATGGTCTATTCGCGCCTGGGCCAGCGCCTGCGGGCGGCGGGCACCGCCGAACTGGCC
GGCTGGAGCCTGACGCCCAACCCCGCCCGCGCCGCCCTCATCCGCCGCGAGGCGGCGAGGCTGTTCCCCAAGGCCGGCGA
TTACGCCCGGGCGCGGGACTGGTGCGGCCTGCGCCCGACCACCCCGGATTCCGTGCCGATCATCGGTAAGGCGCCGGGAA
TCGATAACCTTTTTCTCAATACCGGCCACGGCACCCTGGGCTGGACCATGGCCTGCGGCTCTGGCAAACTGATCGCCGAT
CTGATATCGGGACGGGCCACGGACATCGATACCACAGGACTCGGGCTAGACCGCTTCTAG

Upstream 100 bases:

>100_bases
CTTCCCCCTTTCGGTCCACCCCGCGGACCGATACCCTTGATCTCATGTAGGATACCCCAAGGCCGAACGCGATGGTCGGC
GCAAAGAGGAGACGGCGGCG

Downstream 100 bases:

>100_bases
CCGAGCCTATACACTGCGCCGACCTTTTCCCAGAAGGTCGCTTTTTTGTCATGCGGGTCCGGTTGTGGCCCCGCGCCGCA
GTGGGCAGGAGCTATAAACG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MDVLVLGAGLIGTTSAHFLARAGHDVTVIDRQPGPGLETSFANGGQISACHTQPWAHPETPLMALRWLGRADAPLVFDWA
RWDPALWVWGLRFLANCTLSAYDRNMERAVRVALYSRSVLKELRAETGLRYDERTRGILKIYRDQGDFDKGLRAMEKTAA
WGLRQSACPAARCLELEPALATGGVRLAGGILAAEDESGDAHLFTQGLAALSAAKGVRFLGETTITGLRLEGRRVAEVLT
SRGPLRADTIVLAAGSFSPGLARTIGLRLPVYPAKGYSITLDVDGAGQGAPTLSITDEASKMVYSRLGQRLRAAGTAELA
GWSLTPNPARAALIRREAARLFPKAGDYARARDWCGLRPTTPDSVPIIGKAPGIDNLFLNTGHGTLGWTMACGSGKLIAD
LISGRATDIDTTGLGLDRF

Sequences:

>Translated_419_residues
MDVLVLGAGLIGTTSAHFLARAGHDVTVIDRQPGPGLETSFANGGQISACHTQPWAHPETPLMALRWLGRADAPLVFDWA
RWDPALWVWGLRFLANCTLSAYDRNMERAVRVALYSRSVLKELRAETGLRYDERTRGILKIYRDQGDFDKGLRAMEKTAA
WGLRQSACPAARCLELEPALATGGVRLAGGILAAEDESGDAHLFTQGLAALSAAKGVRFLGETTITGLRLEGRRVAEVLT
SRGPLRADTIVLAAGSFSPGLARTIGLRLPVYPAKGYSITLDVDGAGQGAPTLSITDEASKMVYSRLGQRLRAAGTAELA
GWSLTPNPARAALIRREAARLFPKAGDYARARDWCGLRPTTPDSVPIIGKAPGIDNLFLNTGHGTLGWTMACGSGKLIAD
LISGRATDIDTTGLGLDRF
>Mature_419_residues
MDVLVLGAGLIGTTSAHFLARAGHDVTVIDRQPGPGLETSFANGGQISACHTQPWAHPETPLMALRWLGRADAPLVFDWA
RWDPALWVWGLRFLANCTLSAYDRNMERAVRVALYSRSVLKELRAETGLRYDERTRGILKIYRDQGDFDKGLRAMEKTAA
WGLRQSACPAARCLELEPALATGGVRLAGGILAAEDESGDAHLFTQGLAALSAAKGVRFLGETTITGLRLEGRRVAEVLT
SRGPLRADTIVLAAGSFSPGLARTIGLRLPVYPAKGYSITLDVDGAGQGAPTLSITDEASKMVYSRLGQRLRAAGTAELA
GWSLTPNPARAALIRREAARLFPKAGDYARARDWCGLRPTTPDSVPIIGKAPGIDNLFLNTGHGTLGWTMACGSGKLIAD
LISGRATDIDTTGLGLDRF

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=421, Percent_Identity=40.855106888361, Blast_Score=313, Evalue=1e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 44784; Mature: 44784

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLVLGAGLIGTTSAHFLARAGHDVTVIDRQPGPGLETSFANGGQISACHTQPWAHPET
CCEEEEECCCHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCC
PLMALRWLGRADAPLVFDWARWDPALWVWGLRFLANCTLSAYDRNMERAVRVALYSRSVL
HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHH
KELRAETGLRYDERTRGILKIYRDQGDFDKGLRAMEKTAAWGLRQSACPAARCLELEPAL
HHHHHHHCCCCCHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCH
ATGGVRLAGGILAAEDESGDAHLFTQGLAALSAAKGVRFLGETTITGLRLEGRRVAEVLT
HCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHCCHHEECCCEEEEEEECCHHHHHHHH
SRGPLRADTIVLAAGSFSPGLARTIGLRLPVYPAKGYSITLDVDGAGQGAPTLSITDEAS
CCCCCCCCEEEEEECCCCCCHHHHHCCEEEEEECCCCEEEEEECCCCCCCCEEEECHHHH
KMVYSRLGQRLRAAGTAELAGWSLTPNPARAALIRREAARLFPKAGDYARARDWCGLRPT
HHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC
TPDSVPIIGKAPGIDNLFLNTGHGTLGWTMACGSGKLIADLISGRATDIDTTGLGLDRF
CCCCCCEEECCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDVLVLGAGLIGTTSAHFLARAGHDVTVIDRQPGPGLETSFANGGQISACHTQPWAHPET
CCEEEEECCCHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCC
PLMALRWLGRADAPLVFDWARWDPALWVWGLRFLANCTLSAYDRNMERAVRVALYSRSVL
HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHH
KELRAETGLRYDERTRGILKIYRDQGDFDKGLRAMEKTAAWGLRQSACPAARCLELEPAL
HHHHHHHCCCCCHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCH
ATGGVRLAGGILAAEDESGDAHLFTQGLAALSAAKGVRFLGETTITGLRLEGRRVAEVLT
HCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHCCHHEECCCEEEEEEECCHHHHHHHH
SRGPLRADTIVLAAGSFSPGLARTIGLRLPVYPAKGYSITLDVDGAGQGAPTLSITDEAS
CCCCCCCCEEEEEECCCCCCHHHHHCCEEEEEECCCCEEEEEECCCCCCCCEEEECHHHH
KMVYSRLGQRLRAAGTAELAGWSLTPNPARAALIRREAARLFPKAGDYARARDWCGLRPT
HHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC
TPDSVPIIGKAPGIDNLFLNTGHGTLGWTMACGSGKLIADLISGRATDIDTTGLGLDRF
CCCCCCEEECCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA