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The map label for this gene is mcp2 [H]

Identifier: 83592889

GI number: 83592889

Start: 1833839

End: 1835326

Strand: Reverse

Name: mcp2 [H]

Synonym: Rru_A1554

Alternate gene names: 83592889

Gene position: 1835326-1833839 (Counterclockwise)

Preceding gene: 83592909

Following gene: 83592881

Centisome position: 42.16

GC content: 65.32

Gene sequence:

>1488_bases
GTGAGGATATTTCGCGTCGCCATCGCCCAACCATCGCCGGAGACTCCGGTCCAACCGGCCTGCCCTCCCCTTGGGGACTC
CGGTGCCCCGGGCGCCGCCGGGCCGACCTCGGAAACCCTGACCGCCCTGATCAACGATGTGCTGCACCGGGTGGAAACCC
TGTCGATCGATCTCGCCGATGTCGCCGGCGATATCGACACCATCGCCCGCTTCGTCAAACGCCAGGAGGAGTTGTTCTCC
CACCTCGTCGTCCTGGCCCAGGATGTCCAAGGCGCCATCGACCGGATCGACAACGCCGGGCAATCGACCAACGCGGTCAC
CAAGGACGCCTCGGACAGCATGCGGCGCTCGGGGGAGGCCATTCGCGCCGCCATCGAGAACATCGAAGGCTTGACCCGCG
CCGTCAGCGGCATCGCCGGTCGGCTGTCCACGGTCGAACAATCCCTTGACGGCGTCAACCAATCCTCGGCGATCATCCGT
ACCGTCGCCCAGCAGACCAATCTTCTGGCGCTGAACGCCACCATCGAAGCCGCCCATGCCGGCGATGCCGGGCGGGGCTT
CGCCATCGTCGCCAAGGAGGTGAAAACCCTGGCCGGCCAGTCCCAGGGGGCGGCCACCGGCATCCAGAAGACGGTCAATT
CCCTTAGCTCGAGCCTCGGCGAACTGATCGAGACTAGCGGCACGATCGTCGCCAACGCCCAGGAGGCCAACAATGGCATC
GCCGTGATCAACGAGGCGGTCTCGGGCTTCAGCGGCTCGATTTCCATCGTTGACCGCCATGTCGACGAAATCGCCGGCGC
CACCGCCACCACCAAGGACCGCTGCGCCGATATCGTCCGCGAAATCCATCAGGCGGCCGAAGGCGTTTCGGCGACCAGCC
GCAATCTGGCCAGCGCCGACCAGCGGGTCTCGTCGATCGTGAGCGTGGGCGAGGCGCTGATCGCCACCATCTTGGAAAGC
GGCGTCGAAACCCCCGATACCCCCTTCATCGCCGCCGTGCGCGACGCGGCCGAACAGGTGGCCGCGGCGCTTGAAGGCGC
CATCGATCGCGGCCAGATCAGCTTGGCCGCGCTGTTTAGCGAGGTCTATACCCCGATCCCCGGCAGCGACCCCGCCCAGG
TCACCACCGCCTTCACCGATCTGGTCGACCGGCTGTTTCCACCGATCCAAGAGCCTTTGTTGACCCTCAACGAAAAGGTG
GTGTTCTGCGCCGCCGTCGATCGCAATGGCTATCTGCCCACCCACAACCAAAAGTTCTCAAAGCCCCAGGGCCCCGATCC
GGTCTGGAACAACGCCAACAGCCGCAATCGCCGCATCTTCAATGACCGCACCGGTTTGGCCGCCGGGCGCAATACCCGGC
CCTTTCTGGTCCAAACCTACCGCCGCGACATGGGCGGCGGCTCCTTCATCATGATGAAGGACGCCAGCGCGCCGATCTTC
GTCAAGGGTCGCCATTGGGGGGGCTTTCGCATGGGCTATCGCCTGTAA

Upstream 100 bases:

>100_bases
GCACAGTTTTAGGAAGCGAAAAAGGCCGCCCGTCGCGTTCTAGCGGCGCAGGACAAGGCGCCGGGTAAGCCGGTAGAGAC
TTAAAGGGAGGAAATAACTG

Downstream 100 bases:

>100_bases
GCCGGCTTTCGAGGCGGGTTTATGAAAAAACCCGGCGCCGCCCTCCAAGGCCGCGCCGGGTTTTTCTATCTGGTGGGCGG
TGACGGGTTCGAACCGCCGA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MRIFRVAIAQPSPETPVQPACPPLGDSGAPGAAGPTSETLTALINDVLHRVETLSIDLADVAGDIDTIARFVKRQEELFS
HLVVLAQDVQGAIDRIDNAGQSTNAVTKDASDSMRRSGEAIRAAIENIEGLTRAVSGIAGRLSTVEQSLDGVNQSSAIIR
TVAQQTNLLALNATIEAAHAGDAGRGFAIVAKEVKTLAGQSQGAATGIQKTVNSLSSSLGELIETSGTIVANAQEANNGI
AVINEAVSGFSGSISIVDRHVDEIAGATATTKDRCADIVREIHQAAEGVSATSRNLASADQRVSSIVSVGEALIATILES
GVETPDTPFIAAVRDAAEQVAAALEGAIDRGQISLAALFSEVYTPIPGSDPAQVTTAFTDLVDRLFPPIQEPLLTLNEKV
VFCAAVDRNGYLPTHNQKFSKPQGPDPVWNNANSRNRRIFNDRTGLAAGRNTRPFLVQTYRRDMGGGSFIMMKDASAPIF
VKGRHWGGFRMGYRL

Sequences:

>Translated_495_residues
MRIFRVAIAQPSPETPVQPACPPLGDSGAPGAAGPTSETLTALINDVLHRVETLSIDLADVAGDIDTIARFVKRQEELFS
HLVVLAQDVQGAIDRIDNAGQSTNAVTKDASDSMRRSGEAIRAAIENIEGLTRAVSGIAGRLSTVEQSLDGVNQSSAIIR
TVAQQTNLLALNATIEAAHAGDAGRGFAIVAKEVKTLAGQSQGAATGIQKTVNSLSSSLGELIETSGTIVANAQEANNGI
AVINEAVSGFSGSISIVDRHVDEIAGATATTKDRCADIVREIHQAAEGVSATSRNLASADQRVSSIVSVGEALIATILES
GVETPDTPFIAAVRDAAEQVAAALEGAIDRGQISLAALFSEVYTPIPGSDPAQVTTAFTDLVDRLFPPIQEPLLTLNEKV
VFCAAVDRNGYLPTHNQKFSKPQGPDPVWNNANSRNRRIFNDRTGLAAGRNTRPFLVQTYRRDMGGGSFIMMKDASAPIF
VKGRHWGGFRMGYRL
>Mature_495_residues
MRIFRVAIAQPSPETPVQPACPPLGDSGAPGAAGPTSETLTALINDVLHRVETLSIDLADVAGDIDTIARFVKRQEELFS
HLVVLAQDVQGAIDRIDNAGQSTNAVTKDASDSMRRSGEAIRAAIENIEGLTRAVSGIAGRLSTVEQSLDGVNQSSAIIR
TVAQQTNLLALNATIEAAHAGDAGRGFAIVAKEVKTLAGQSQGAATGIQKTVNSLSSSLGELIETSGTIVANAQEANNGI
AVINEAVSGFSGSISIVDRHVDEIAGATATTKDRCADIVREIHQAAEGVSATSRNLASADQRVSSIVSVGEALIATILES
GVETPDTPFIAAVRDAAEQVAAALEGAIDRGQISLAALFSEVYTPIPGSDPAQVTTAFTDLVDRLFPPIQEPLLTLNEKV
VFCAAVDRNGYLPTHNQKFSKPQGPDPVWNNANSRNRRIFNDRTGLAAGRNTRPFLVQTYRRDMGGGSFIMMKDASAPIF
VKGRHWGGFRMGYRL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=169, Percent_Identity=31.9526627218935, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789453, Length=265, Percent_Identity=29.811320754717, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788195, Length=169, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 52127; Mature: 52127

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFRVAIAQPSPETPVQPACPPLGDSGAPGAAGPTSETLTALINDVLHRVETLSIDLAD
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEHHH
VAGDIDTIARFVKRQEELFSHLVVLAQDVQGAIDRIDNAGQSTNAVTKDASDSMRRSGEA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
IRAAIENIEGLTRAVSGIAGRLSTVEQSLDGVNQSSAIIRTVAQQTNLLALNATIEAAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECEEEHHCC
GDAGRGFAIVAKEVKTLAGQSQGAATGIQKTVNSLSSSLGELIETSGTIVANAQEANNGI
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCCCCC
AVINEAVSGFSGSISIVDRHVDEIAGATATTKDRCADIVREIHQAAEGVSATSRNLASAD
EEHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QRVSSIVSVGEALIATILESGVETPDTPFIAAVRDAAEQVAAALEGAIDRGQISLAALFS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EVYTPIPGSDPAQVTTAFTDLVDRLFPPIQEPLLTLNEKVVFCAAVDRNGYLPTHNQKFS
HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC
KPQGPDPVWNNANSRNRRIFNDRTGLAAGRNTRPFLVQTYRRDMGGGSFIMMKDASAPIF
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEE
VKGRHWGGFRMGYRL
EECCCCCCCCCCCCC
>Mature Secondary Structure
MRIFRVAIAQPSPETPVQPACPPLGDSGAPGAAGPTSETLTALINDVLHRVETLSIDLAD
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEHHH
VAGDIDTIARFVKRQEELFSHLVVLAQDVQGAIDRIDNAGQSTNAVTKDASDSMRRSGEA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
IRAAIENIEGLTRAVSGIAGRLSTVEQSLDGVNQSSAIIRTVAQQTNLLALNATIEAAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECEEEHHCC
GDAGRGFAIVAKEVKTLAGQSQGAATGIQKTVNSLSSSLGELIETSGTIVANAQEANNGI
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCCCCC
AVINEAVSGFSGSISIVDRHVDEIAGATATTKDRCADIVREIHQAAEGVSATSRNLASAD
EEHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QRVSSIVSVGEALIATILESGVETPDTPFIAAVRDAAEQVAAALEGAIDRGQISLAALFS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EVYTPIPGSDPAQVTTAFTDLVDRLFPPIQEPLLTLNEKVVFCAAVDRNGYLPTHNQKFS
HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC
KPQGPDPVWNNANSRNRRIFNDRTGLAAGRNTRPFLVQTYRRDMGGGSFIMMKDASAPIF
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEE
VKGRHWGGFRMGYRL
EECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]