| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592846
Identifier: 83592846
GI number: 83592846
Start: 1784020
End: 1784673
Strand: Direct
Name: 83592846
Synonym: Rru_A1510
Alternate gene names: NA
Gene position: 1784020-1784673 (Clockwise)
Preceding gene: 83592844
Following gene: 83592847
Centisome position: 40.99
GC content: 67.43
Gene sequence:
>654_bases ATGGGGGGGAACTTGGAAACCTTGGCCGGGTGGAGCGCGCCGATCGCCACGGCGATCGCGGCGATCATGACGGCGTCCAA TCTCAGCGCCCGGGTGACCGGCTGGGGCTTCGTGGTCTTCACTATTGGCTCGCTCAGCTGGTCGGTGGTCGGCCTGACCA CGGGGCAGACGACGCTGCTCATGACCAACGGCTTTCTGACGCTGGTCAATATGCTGGGCGTCTGGCGCTGGCTGGGTCGT CAGGCCCATTACGAGGACATCGGCCAAACGGCGGTTTCCCTCAGCGAGACCTCGGCGGCGCCAACCCTGGTCACGGCGGG CGCCTTGTCCGGGATGAGCGTTCACGCCGAGGGCGGCGAAAGCGTCGGCACGGTGGTCGAGGCGATGCTTGAAAGCGACA GCGGCCGGCTGCGCTTTGTCGTGGTCGGCAGGGGGGGCGTGAGCGGTATCGGCGAGGCGCTTGTCGCCATCGATCGCGGC GCCTTGCGCTTTCACCCCGACCGTATCGATCTGGCGATGCCCGCCAGCGTCTTTCAGGCCCTGCCCGAATGGGCTCCCGG GGCCAATCCCGCCGGCCTTGAAGATCCGCGTCCGACGGGTAAGGTGGCGGGGAAACCCCGCAGCCAGGATCCCAGACCCG ATGACAAGCCTTAG
Upstream 100 bases:
>100_bases GGTGTTTTTCGCCCAAGTCCTCCGATTGTTGGGTAACGCATTGTGCGCGGCCGCGTTACTCGCCCGCCAGAGCGGGGCCG CCAGGGCCGAAAGGATCATC
Downstream 100 bases:
>100_bases CCTGTGTATGATCATGCGCGACGAAGAGCGGCTGATCCCCGAATTCCTTGATCACAGTCGCGGTCTGTATGACCAGTTCG TGGTCGTCGATACCGGATCG
Product: PRC-barrel domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MGGNLETLAGWSAPIATAIAAIMTASNLSARVTGWGFVVFTIGSLSWSVVGLTTGQTTLLMTNGFLTLVNMLGVWRWLGR QAHYEDIGQTAVSLSETSAAPTLVTAGALSGMSVHAEGGESVGTVVEAMLESDSGRLRFVVVGRGGVSGIGEALVAIDRG ALRFHPDRIDLAMPASVFQALPEWAPGANPAGLEDPRPTGKVAGKPRSQDPRPDDKP
Sequences:
>Translated_217_residues MGGNLETLAGWSAPIATAIAAIMTASNLSARVTGWGFVVFTIGSLSWSVVGLTTGQTTLLMTNGFLTLVNMLGVWRWLGR QAHYEDIGQTAVSLSETSAAPTLVTAGALSGMSVHAEGGESVGTVVEAMLESDSGRLRFVVVGRGGVSGIGEALVAIDRG ALRFHPDRIDLAMPASVFQALPEWAPGANPAGLEDPRPTGKVAGKPRSQDPRPDDKP >Mature_216_residues GGNLETLAGWSAPIATAIAAIMTASNLSARVTGWGFVVFTIGSLSWSVVGLTTGQTTLLMTNGFLTLVNMLGVWRWLGRQ AHYEDIGQTAVSLSETSAAPTLVTAGALSGMSVHAEGGESVGTVVEAMLESDSGRLRFVVVGRGGVSGIGEALVAIDRGA LRFHPDRIDLAMPASVFQALPEWAPGANPAGLEDPRPTGKVAGKPRSQDPRPDDKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22480; Mature: 22349
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGNLETLAGWSAPIATAIAAIMTASNLSARVTGWGFVVFTIGSLSWSVVGLTTGQTTLL CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCEEEEEEECCCEEEE MTNGFLTLVNMLGVWRWLGRQAHYEDIGQTAVSLSETSAAPTLVTAGALSGMSVHAEGGE EECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCC SVGTVVEAMLESDSGRLRFVVVGRGGVSGIGEALVAIDRGALRFHPDRIDLAMPASVFQA HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCEECCHHHHHH LPEWAPGANPAGLEDPRPTGKVAGKPRSQDPRPDDKP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GGNLETLAGWSAPIATAIAAIMTASNLSARVTGWGFVVFTIGSLSWSVVGLTTGQTTLL CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCEEEEEEECCCEEEE MTNGFLTLVNMLGVWRWLGRQAHYEDIGQTAVSLSETSAAPTLVTAGALSGMSVHAEGGE EECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCC SVGTVVEAMLESDSGRLRFVVVGRGGVSGIGEALVAIDRGALRFHPDRIDLAMPASVFQA HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCEECCHHHHHH LPEWAPGANPAGLEDPRPTGKVAGKPRSQDPRPDDKP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA