| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592847
Identifier: 83592847
GI number: 83592847
Start: 1784681
End: 1785760
Strand: Direct
Name: 83592847
Synonym: Rru_A1511
Alternate gene names: NA
Gene position: 1784681-1785760 (Clockwise)
Preceding gene: 83592846
Following gene: 83592848
Centisome position: 41.0
GC content: 66.11
Gene sequence:
>1080_bases ATGATCATGCGCGACGAAGAGCGGCTGATCCCCGAATTCCTTGATCACAGTCGCGGTCTGTATGACCAGTTCGTGGTCGT CGATACCGGATCGGTCGATCGCACGGTGCCGTTGTTGACGGCGGCGGGGGCGGAGGTGCATCGCCAGCCCTGGCGCGATG ATTTCGCCCGGGCGCGCAATGAAAGCCTGCGTCACGCCACAGCCGACTGGATCTTGGTGCTTGATGCCGATGAATTTCCC CAGGAGGGATTCGCCGAGGAGATCCGCGCGCTGATCGCCAGCCCGGGCGTCGGCGCGGCGACGATTCTGCGCCATGACGA ACAAAAGAACGGCATCGTCCGCAAGGCGCGGCCGCTGCGGCTGTTTCGCAACGATCCCGGGGTCGCCTATCGCTGCCGCA TCCACGAAGACGCTTCGGAAAGCATCGCCGCCATGCTGGCGAAAAGGGGGGAGCGCATCGCCGCCCTGGAAACCCCGGTG CGCCATGTCGGCTATCTTCCCCAGCATATGACCGGGCAAAACAAGGAACGCCGCGACGAACGCCTGCTGAAGCTGGCGCT GAAGGACGACCCCAAGGATCTGTATAGCCGCTATAAGCTGCTGGAGCTGTACCGCTTCTGGGGCAAGGCCGCCAAGACGG CGCCGATCGCCAGGGAGTGCCGGCGGCTGATCGAAGCCGGACAGCGCATCGTTCCGGCCCATATCGCCGGCGATCTGGTC GAGATGATCCGGGCCGCGCTGTTTGCCAAGGATGCCGAGGGCGGCTTGGCCTTTCTGGAGTCGATGGCGCCGGTCGCCGA CCAGACCGGGCATTACCATCTGGCCTGCGGCCTGCTGCTGGAAAACAAGGCGTGCTTCGCCGAGGCCGGCGACCGATTCC GCCGGGCGATGGCGGTGGCCACCCTTGATCCGGCCCGCGCCCTGATCGAAACCCGCGCCCTGGCCGGGCTGACCCGGCTG GCGATGGCGCAAGGCGATATGGCCGGGGCCAAGGCCCATGCCCTTGACGCCGCGCGGATCTCCCCCGACGACGCCGAGAT CGCCCTGGCTTTGGGCTTCCTGGAAAGCTTGCGGCTATGA
Upstream 100 bases:
>100_bases GCCAATCCCGCCGGCCTTGAAGATCCGCGTCCGACGGGTAAGGTGGCGGGGAAACCCCGCAGCCAGGATCCCAGACCCGA TGACAAGCCTTAGCCTGTGT
Downstream 100 bases:
>100_bases GGGCGGCGGCCGGAGTTTTTGACTGGCCGGAGTGTTATGCGGAAAGCAGAAGAGGGGGTGTAGGAGGGGCTGGCGCGCCG TGGCGCTGACCGCGAGCCGG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MIMRDEERLIPEFLDHSRGLYDQFVVVDTGSVDRTVPLLTAAGAEVHRQPWRDDFARARNESLRHATADWILVLDADEFP QEGFAEEIRALIASPGVGAATILRHDEQKNGIVRKARPLRLFRNDPGVAYRCRIHEDASESIAAMLAKRGERIAALETPV RHVGYLPQHMTGQNKERRDERLLKLALKDDPKDLYSRYKLLELYRFWGKAAKTAPIARECRRLIEAGQRIVPAHIAGDLV EMIRAALFAKDAEGGLAFLESMAPVADQTGHYHLACGLLLENKACFAEAGDRFRRAMAVATLDPARALIETRALAGLTRL AMAQGDMAGAKAHALDAARISPDDAEIALALGFLESLRL
Sequences:
>Translated_359_residues MIMRDEERLIPEFLDHSRGLYDQFVVVDTGSVDRTVPLLTAAGAEVHRQPWRDDFARARNESLRHATADWILVLDADEFP QEGFAEEIRALIASPGVGAATILRHDEQKNGIVRKARPLRLFRNDPGVAYRCRIHEDASESIAAMLAKRGERIAALETPV RHVGYLPQHMTGQNKERRDERLLKLALKDDPKDLYSRYKLLELYRFWGKAAKTAPIARECRRLIEAGQRIVPAHIAGDLV EMIRAALFAKDAEGGLAFLESMAPVADQTGHYHLACGLLLENKACFAEAGDRFRRAMAVATLDPARALIETRALAGLTRL AMAQGDMAGAKAHALDAARISPDDAEIALALGFLESLRL >Mature_359_residues MIMRDEERLIPEFLDHSRGLYDQFVVVDTGSVDRTVPLLTAAGAEVHRQPWRDDFARARNESLRHATADWILVLDADEFP QEGFAEEIRALIASPGVGAATILRHDEQKNGIVRKARPLRLFRNDPGVAYRCRIHEDASESIAAMLAKRGERIAALETPV RHVGYLPQHMTGQNKERRDERLLKLALKDDPKDLYSRYKLLELYRFWGKAAKTAPIARECRRLIEAGQRIVPAHIAGDLV EMIRAALFAKDAEGGLAFLESMAPVADQTGHYHLACGLLLENKACFAEAGDRFRRAMAVATLDPARALIETRALAGLTRL AMAQGDMAGAKAHALDAARISPDDAEIALALGFLESLRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00535 Glycos_transf_2; PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 39855; Mature: 39855
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMRDEERLIPEFLDHSRGLYDQFVVVDTGSVDRTVPLLTAAGAEVHRQPWRDDFARARN CCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHH ESLRHATADWILVLDADEFPQEGFAEEIRALIASPGVGAATILRHDEQKNGIVRKARPLR HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCHHCCCCHH LFRNDPGVAYRCRIHEDASESIAAMLAKRGERIAALETPVRHVGYLPQHMTGQNKERRDE HEECCCCCEEEEEECCCHHHHHHHHHHHCCCEEEHHHCCHHHHCCCCCCCCCCCHHHHHH RLLKLALKDDPKDLYSRYKLLELYRFWGKAAKTAPIARECRRLIEAGQRIVPAHIAGDLV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHHH EMIRAALFAKDAEGGLAFLESMAPVADQTGHYHLACGLLLENKACFAEAGDRFRRAMAVA HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH TLDPARALIETRALAGLTRLAMAQGDMAGAKAHALDAARISPDDAEIALALGFLESLRL HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIMRDEERLIPEFLDHSRGLYDQFVVVDTGSVDRTVPLLTAAGAEVHRQPWRDDFARARN CCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHH ESLRHATADWILVLDADEFPQEGFAEEIRALIASPGVGAATILRHDEQKNGIVRKARPLR HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCHHCCCCHH LFRNDPGVAYRCRIHEDASESIAAMLAKRGERIAALETPVRHVGYLPQHMTGQNKERRDE HEECCCCCEEEEEECCCHHHHHHHHHHHCCCEEEHHHCCHHHHCCCCCCCCCCCHHHHHH RLLKLALKDDPKDLYSRYKLLELYRFWGKAAKTAPIARECRRLIEAGQRIVPAHIAGDLV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHHH EMIRAALFAKDAEGGLAFLESMAPVADQTGHYHLACGLLLENKACFAEAGDRFRRAMAVA HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHH TLDPARALIETRALAGLTRLAMAQGDMAGAKAHALDAARISPDDAEIALALGFLESLRL HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8123787 [H]