| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592686
Identifier: 83592686
GI number: 83592686
Start: 1590893
End: 1592158
Strand: Direct
Name: 83592686
Synonym: Rru_A1350
Alternate gene names: NA
Gene position: 1590893-1592158 (Clockwise)
Preceding gene: 83592685
Following gene: 83592687
Centisome position: 36.55
GC content: 67.22
Gene sequence:
>1266_bases ATGGGATGGGTTGTGGACTCCTATATCATCGTCCTGGTCGGCTTCGGCGCGTTGGTTCTGCTGACTGCGTGGTTGCCGAT GGTTCTCAGGGAAGCGCCCTTGTCGCTTCCCATCCTGTGCGTGGCCATCGGCGCGGCGGTTTTCGCCCTGCCGCCGCTGG CGGGCGTGGTGCCCCGGCCCCAGGATCATCTGCCGGTGATCGAGCGGGTCAGCGAAATGCTCGTCATCCTGTCGCTGATG GGCGCCGGACTGAAGATCGACCGTCCTTTTGGCTGGAAAAGCTGGGCCGTGACCGGGCGGCTGTTGGCGGCGGCGATGCC GCTGACCATCCTCGGGCTGGCCTTGGTTGGCTGGCTTGTGCTGGGGCTGGGGGCGGCCGCGGCCCTATTGCTGGCGGCGG CGCTGGCGCCCACCGATCCGGTGCTGGCCAGCGATATCCAGGTCGGCCCGCCCAATTCCGGCGAGGAAAACCAGACCCGC TTCGCCCTGACCTCGGAGGCCGGGCTGAACGACGCCTTGGCCTTTCCCTTCGTTCACGCCGCCCTGGCCCTGGCCGTCGC CGGCAAGACCGGCGAGCCGTGGCTTGGCCACTGGCTAAGCGTTGATATCGTCTGGAAACTGGGCGCCGGTTTGGCGATGG GCGTTCTGGTCGGTCACGGCTTGGCGTGGCTGCTGTTTCGTGTTCCCCATCGGGCGAGGCTGTCGCGCTCGGGGGATGGC TTCGTCGCCCTGGGGATCACCTGCGTCGTTTATGGCCTGACGGAAATGGTCCAGGGCTATGGTTTTCTCGCCGTCTTCGT CGCCGCCCTGACCCTGCGCGCGGGTGAGCGCCGTCACGCCTATCAGGGGACCTTGCATGATTTCGCCGAGGCCCTTGAGC GGCTGCTGATGATGGCCCTGCTGGTCGGGTTCGGCGCGGCGCTCAGCGGAGCGGGCCTCTTGGCGGGGCTTACCTGGGAA GGGGTGGCTTTCGGCCTGATCGCGCTGGTCGTGGTCCGCCCACTGACCGCCTGGATCGGTCTGGCGGGCATGGGCGGCCC TTTGGCCGAAAGGGCCATCATCAGCCTTTATGGCATTCGCGGCATCGGCTCGATCTACTATCTGTCCTATGCCCTGGGAC GGGGGAGCTTTGACGGGGAAGACCTGCTGTGGAGCACCCTGGCCTTCACCATCCTGGTCTCGATTTTCCTGCACGGCGCG ACGGTGACGCCGGTGATGCGCGCCTTTGAGCGCCGGCAGGGGCGCGACACCACGCCCGGCCGCTGA
Upstream 100 bases:
>100_bases TTTGGGGTTCTAAGAACCATTATCGATCAAACGCGCAACCGGCCTTGACCAGCCCCCGTTGGGGGAGAGGCGAACGCCCC CGGCGGGGCGGTTCCGGGTC
Downstream 100 bases:
>100_bases ACGACCGGTGCTGTTTTCGGGCCCGATTTCGGCGAAAAGGCGCGGCCTTATCGGAGTGGGGGGCGAGACTCGCCGCGCCG GGGGGCGCCTTCGCCGGGGA
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: Na+/H+ Antiporter; Sodium/Hydrogen Exchanger Family Protein; Cation Transport Related Protein; Na+/H+ Antiporter CPA1 Family Protein; Transporter CPA2 Family; Na+/H+ Antiporter-Like Protein; Na(+)/H(+) Antiporter; Sodium/Proton Antiporter CPA1 Family; CPA1 Family Na+/H+ Antiporter; CPA1 Family Na(+)/H(+) Antiporter; NhaP-Type Na+/H+ And K+/H+ Antiporter; Cation Transporter-Like Protein
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MGWVVDSYIIVLVGFGALVLLTAWLPMVLREAPLSLPILCVAIGAAVFALPPLAGVVPRPQDHLPVIERVSEMLVILSLM GAGLKIDRPFGWKSWAVTGRLLAAAMPLTILGLALVGWLVLGLGAAAALLLAAALAPTDPVLASDIQVGPPNSGEENQTR FALTSEAGLNDALAFPFVHAALALAVAGKTGEPWLGHWLSVDIVWKLGAGLAMGVLVGHGLAWLLFRVPHRARLSRSGDG FVALGITCVVYGLTEMVQGYGFLAVFVAALTLRAGERRHAYQGTLHDFAEALERLLMMALLVGFGAALSGAGLLAGLTWE GVAFGLIALVVVRPLTAWIGLAGMGGPLAERAIISLYGIRGIGSIYYLSYALGRGSFDGEDLLWSTLAFTILVSIFLHGA TVTPVMRAFERRQGRDTTPGR
Sequences:
>Translated_421_residues MGWVVDSYIIVLVGFGALVLLTAWLPMVLREAPLSLPILCVAIGAAVFALPPLAGVVPRPQDHLPVIERVSEMLVILSLM GAGLKIDRPFGWKSWAVTGRLLAAAMPLTILGLALVGWLVLGLGAAAALLLAAALAPTDPVLASDIQVGPPNSGEENQTR FALTSEAGLNDALAFPFVHAALALAVAGKTGEPWLGHWLSVDIVWKLGAGLAMGVLVGHGLAWLLFRVPHRARLSRSGDG FVALGITCVVYGLTEMVQGYGFLAVFVAALTLRAGERRHAYQGTLHDFAEALERLLMMALLVGFGAALSGAGLLAGLTWE GVAFGLIALVVVRPLTAWIGLAGMGGPLAERAIISLYGIRGIGSIYYLSYALGRGSFDGEDLLWSTLAFTILVSIFLHGA TVTPVMRAFERRQGRDTTPGR >Mature_420_residues GWVVDSYIIVLVGFGALVLLTAWLPMVLREAPLSLPILCVAIGAAVFALPPLAGVVPRPQDHLPVIERVSEMLVILSLMG AGLKIDRPFGWKSWAVTGRLLAAAMPLTILGLALVGWLVLGLGAAAALLLAAALAPTDPVLASDIQVGPPNSGEENQTRF ALTSEAGLNDALAFPFVHAALALAVAGKTGEPWLGHWLSVDIVWKLGAGLAMGVLVGHGLAWLLFRVPHRARLSRSGDGF VALGITCVVYGLTEMVQGYGFLAVFVAALTLRAGERRHAYQGTLHDFAEALERLLMMALLVGFGAALSGAGLLAGLTWEG VAFGLIALVVVRPLTAWIGLAGMGGPLAERAIISLYGIRGIGSIYYLSYALGRGSFDGEDLLWSTLAFTILVSIFLHGAT VTPVMRAFERRQGRDTTPGR
Specific function: Unknown
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323167, Length=371, Percent_Identity=22.1024258760108, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44306; Mature: 44175
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWVVDSYIIVLVGFGALVLLTAWLPMVLREAPLSLPILCVAIGAAVFALPPLAGVVPRP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHCCCCCC QDHLPVIERVSEMLVILSLMGAGLKIDRPFGWKSWAVTGRLLAAAMPLTILGLALVGWLV CCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLGAAAALLLAAALAPTDPVLASDIQVGPPNSGEENQTRFALTSEAGLNDALAFPFVHA HHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH ALALAVAGKTGEPWLGHWLSVDIVWKLGAGLAMGVLVGHGLAWLLFRVPHRARLSRSGDG HHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC FVALGITCVVYGLTEMVQGYGFLAVFVAALTLRAGERRHAYQGTLHDFAEALERLLMMAL EEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHH LVGFGAALSGAGLLAGLTWEGVAFGLIALVVVRPLTAWIGLAGMGGPLAERAIISLYGIR HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GIGSIYYLSYALGRGSFDGEDLLWSTLAFTILVSIFLHGATVTPVMRAFERRQGRDTTPG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC R C >Mature Secondary Structure GWVVDSYIIVLVGFGALVLLTAWLPMVLREAPLSLPILCVAIGAAVFALPPLAGVVPRP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHCCCCCC QDHLPVIERVSEMLVILSLMGAGLKIDRPFGWKSWAVTGRLLAAAMPLTILGLALVGWLV CCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLGAAAALLLAAALAPTDPVLASDIQVGPPNSGEENQTRFALTSEAGLNDALAFPFVHA HHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH ALALAVAGKTGEPWLGHWLSVDIVWKLGAGLAMGVLVGHGLAWLLFRVPHRARLSRSGDG HHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC FVALGITCVVYGLTEMVQGYGFLAVFVAALTLRAGERRHAYQGTLHDFAEALERLLMMAL EEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHH LVGFGAALSGAGLLAGLTWEGVAFGLIALVVVRPLTAWIGLAGMGGPLAERAIISLYGIR HHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GIGSIYYLSYALGRGSFDGEDLLWSTLAFTILVSIFLHGATVTPVMRAFERRQGRDTTPG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA