| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is ywrD [H]
Identifier: 83592685
GI number: 83592685
Start: 1589219
End: 1590805
Strand: Direct
Name: ywrD [H]
Synonym: Rru_A1349
Alternate gene names: 83592685
Gene position: 1589219-1590805 (Clockwise)
Preceding gene: 83592684
Following gene: 83592686
Centisome position: 36.51
GC content: 68.37
Gene sequence:
>1587_bases ATGAGAGATTTCTTTCGCGTTGGGCGGGACCCCGTGTTGGCCCGCGAGGCGATGATCGCCACCTCCCATCCGCTCTCGAC GGCGGCCGGGCTGGAAATTCTGAGCGCCGGCGGCACGGCGGTGGACGCGGCCCTGGCTGCCGTCGCCGTGCAAAGCGTCG TCGATCCGCTGATGACCGGCATCGGCGGCGATTGCTTCGCCCTTTACGCCCCGGCCAAGGGCGATGTGGTCGCCCTGAAC GGCAGCGGCCGGGCGCCTTTGGCGGCCAGCGTGTCGCGCCTGAAGGCCCTGGGGGTGGGCGAGATCACCCAGACCAGCCC CCATGCCATTACCGTGCCCGGCGCGGTCGGCGCCTGGACCAAGCTGCATGGCGATTACGGACGGCTGCCGCTCGCCACCT TGTTCGCCCGCGCCATCGCCTATGCCGAGGGCGGCTATCCGGTGACGCCAAGGGTGGCCCATGATTGGGCGCGCGAAGCC GCCCTGGTCGCCGGCGACTCCGGGGCGGCGGCGGTTTTCCTGCCCGATGGCCGGGCGCCGGTGGCCGGGGCGCGTCACGC CCAACCCAAGCTTGGCGACCAATTGCGCGCCATCGCCAGGGACGGGGCGGCTGCCTTTTATCTGGGGCCGACCGCCGAGG CGCTGGTCGCCTATCTTCAGGGGTTGGGCGGGCTGCATACCCTTGACGACTTCGCCTGCGGTCTGGAGGACGCCGAGTAT GTGACGCCGATTTCGACGATTTATCGTGGTCACGAGGTCTTTGAATGTCCGCCCAATGGCCAGGGGCTGGCGGCCTTGAT GATCCTCAATATCCTGTCGGGCTTCGATCTGTCCGATGATCTCGCGCTCGCCGACCGCCTGCATCTGCAGGCCGAGGCGA CCAAGCTCGCCTATTATCACCGCGACGCCCTGATCGCCGATCCGGCCCATCTGCCCTATCCGCCCGACGCGCTGCTCGCC CCCGAAGTCGCCGAGACCCTGCGTCGGCGCATCCGCATGGACCGGGTTCTGGCCCCGGCCCTGTGGACCGAACCCGAGCA CAAGGACACGGTTTACCTTTGTGTCGTCGATGGTCAGGGCAATGCCGTGTCCTTGATCAATTCGATCTTCCATGGCTTCG GCTCCACCCATCTCGATCCGGCGACGGGGATCTTGCTGCACAGCCGTGGGGCGTCGTTCCGGGTGATCGAGGGACATCCC AACGCCATCGGTCCGCGCAAGCGCCCGATGCACACCATCATTCCCGGCATGGTCCGCAAGGACGGCAAGACCGTGATGCC CTTTGGCGTCATGGGCGGCCAGTATCAGGCCGCCGGTCACGCCGCCTTCCTGTCGGGGGTGCTCGATCGCCGTCTCGATG TGCAGCAAGCCATCGACGCCCCGCGCGCCTTTGGCTTTGGCGGCACGCTGGAGGTCGAACCGACCGTCGAGGCCGGGGTG CTGGCCGCCCTGGCGGCGCGCGGCCACCGGGTGACGACGGCGGCCAATCCCATCGGCGGCGCCCAGGCGATCTGGATCGA TCCGCAAAGCGGCCTGCTGGCCGGCGGCTCCGATCAGCGCAAGGACGGCTGCGCTTTGGGGTTCTAA
Upstream 100 bases:
>100_bases TTCTGGCGATCACCGCCCTGCGCATGCTGTGGACCGTGTTCAGCGCCTGAAGACGCCTTGCCGTCGTGGAGTCATCAATC TGGGTTAGGATAAGCCGATC
Downstream 100 bases:
>100_bases GAACCATTATCGATCAAACGCGCAACCGGCCTTGACCAGCCCCCGTTGGGGGAGAGGCGAACGCCCCCGGCGGGGCGGTT CCGGGTCATGGGATGGGTTG
Product: gamma-glutamyltransferase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MRDFFRVGRDPVLAREAMIATSHPLSTAAGLEILSAGGTAVDAALAAVAVQSVVDPLMTGIGGDCFALYAPAKGDVVALN GSGRAPLAASVSRLKALGVGEITQTSPHAITVPGAVGAWTKLHGDYGRLPLATLFARAIAYAEGGYPVTPRVAHDWAREA ALVAGDSGAAAVFLPDGRAPVAGARHAQPKLGDQLRAIARDGAAAFYLGPTAEALVAYLQGLGGLHTLDDFACGLEDAEY VTPISTIYRGHEVFECPPNGQGLAALMILNILSGFDLSDDLALADRLHLQAEATKLAYYHRDALIADPAHLPYPPDALLA PEVAETLRRRIRMDRVLAPALWTEPEHKDTVYLCVVDGQGNAVSLINSIFHGFGSTHLDPATGILLHSRGASFRVIEGHP NAIGPRKRPMHTIIPGMVRKDGKTVMPFGVMGGQYQAAGHAAFLSGVLDRRLDVQQAIDAPRAFGFGGTLEVEPTVEAGV LAALAARGHRVTTAANPIGGAQAIWIDPQSGLLAGGSDQRKDGCALGF
Sequences:
>Translated_528_residues MRDFFRVGRDPVLAREAMIATSHPLSTAAGLEILSAGGTAVDAALAAVAVQSVVDPLMTGIGGDCFALYAPAKGDVVALN GSGRAPLAASVSRLKALGVGEITQTSPHAITVPGAVGAWTKLHGDYGRLPLATLFARAIAYAEGGYPVTPRVAHDWAREA ALVAGDSGAAAVFLPDGRAPVAGARHAQPKLGDQLRAIARDGAAAFYLGPTAEALVAYLQGLGGLHTLDDFACGLEDAEY VTPISTIYRGHEVFECPPNGQGLAALMILNILSGFDLSDDLALADRLHLQAEATKLAYYHRDALIADPAHLPYPPDALLA PEVAETLRRRIRMDRVLAPALWTEPEHKDTVYLCVVDGQGNAVSLINSIFHGFGSTHLDPATGILLHSRGASFRVIEGHP NAIGPRKRPMHTIIPGMVRKDGKTVMPFGVMGGQYQAAGHAAFLSGVLDRRLDVQQAIDAPRAFGFGGTLEVEPTVEAGV LAALAARGHRVTTAANPIGGAQAIWIDPQSGLLAGGSDQRKDGCALGF >Mature_528_residues MRDFFRVGRDPVLAREAMIATSHPLSTAAGLEILSAGGTAVDAALAAVAVQSVVDPLMTGIGGDCFALYAPAKGDVVALN GSGRAPLAASVSRLKALGVGEITQTSPHAITVPGAVGAWTKLHGDYGRLPLATLFARAIAYAEGGYPVTPRVAHDWAREA ALVAGDSGAAAVFLPDGRAPVAGARHAQPKLGDQLRAIARDGAAAFYLGPTAEALVAYLQGLGGLHTLDDFACGLEDAEY VTPISTIYRGHEVFECPPNGQGLAALMILNILSGFDLSDDLALADRLHLQAEATKLAYYHRDALIADPAHLPYPPDALLA PEVAETLRRRIRMDRVLAPALWTEPEHKDTVYLCVVDGQGNAVSLINSIFHGFGSTHLDPATGILLHSRGASFRVIEGHP NAIGPRKRPMHTIIPGMVRKDGKTVMPFGVMGGQYQAAGHAAFLSGVLDRRLDVQQAIDAPRAFGFGGTLEVEPTVEAGV LAALAARGHRVTTAANPIGGAQAIWIDPQSGLLAGGSDQRKDGCALGF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=540, Percent_Identity=28.8888888888889, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI73915090, Length=540, Percent_Identity=28.8888888888889, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI73915096, Length=540, Percent_Identity=28.8888888888889, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI73915094, Length=540, Percent_Identity=28.8888888888889, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI113429324, Length=545, Percent_Identity=29.3577981651376, Blast_Score=143, Evalue=5e-34, Organism=Homo sapiens, GI113429326, Length=532, Percent_Identity=28.9473684210526, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI109148539, Length=508, Percent_Identity=29.7244094488189, Blast_Score=117, Evalue=4e-26, Organism=Homo sapiens, GI153266885, Length=538, Percent_Identity=27.3234200743494, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI153266901, Length=539, Percent_Identity=27.2727272727273, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI153266907, Length=538, Percent_Identity=26.2081784386617, Blast_Score=94, Evalue=2e-19, Organism=Escherichia coli, GI1789856, Length=533, Percent_Identity=30.5816135084428, Blast_Score=200, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17506189, Length=519, Percent_Identity=25.4335260115607, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI193208245, Length=489, Percent_Identity=25.1533742331288, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI193208247, Length=489, Percent_Identity=25.1533742331288, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI18859893, Length=506, Percent_Identity=29.4466403162055, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI161077878, Length=527, Percent_Identity=27.8937381404175, Blast_Score=123, Evalue=4e-28, Organism=Drosophila melanogaster, GI24642670, Length=527, Percent_Identity=27.8937381404175, Blast_Score=123, Evalue=4e-28, Organism=Drosophila melanogaster, GI24642666, Length=527, Percent_Identity=27.8937381404175, Blast_Score=123, Evalue=4e-28, Organism=Drosophila melanogaster, GI161077880, Length=527, Percent_Identity=27.8937381404175, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI45551474, Length=527, Percent_Identity=27.8937381404175, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI18859741, Length=552, Percent_Identity=25.5434782608696, Blast_Score=112, Evalue=7e-25, Organism=Drosophila melanogaster, GI161077496, Length=490, Percent_Identity=25.3061224489796, Blast_Score=101, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 55072; Mature: 55072
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFFRVGRDPVLAREAMIATSHPLSTAAGLEILSAGGTAVDAALAAVAVQSVVDPLMTG CCCHHHCCCCCHHHHHHHHHCCCCCCHHHCHHHEECCCHHHHHHHHHHHHHHHHHHHHHC IGGDCFALYAPAKGDVVALNGSGRAPLAASVSRLKALGVGEITQTSPHAITVPGAVGAWT CCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHH KLHGDYGRLPLATLFARAIAYAEGGYPVTPRVAHDWAREAALVAGDSGAAAVFLPDGRAP HCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCEEEEECCCCCEEEEECCCCCC VAGARHAQPKLGDQLRAIARDGAAAFYLGPTAEALVAYLQGLGGLHTLDDFACGLEDAEY CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHCCCCCCHH VTPISTIYRGHEVFECPPNGQGLAALMILNILSGFDLSDDLALADRLHLQAEATKLAYYH HCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEE RDALIADPAHLPYPPDALLAPEVAETLRRRIRMDRVLAPALWTEPEHKDTVYLCVVDGQG CCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC NAVSLINSIFHGFGSTHLDPATGILLHSRGASFRVIEGHPNAIGPRKRPMHTIIPGMVRK CHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHCCHHHHC DGKTVMPFGVMGGQYQAAGHAAFLSGVLDRRLDVQQAIDAPRAFGFGGTLEVEPTVEAGV CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEECCCHHHHH LAALAARGHRVTTAANPIGGAQAIWIDPQSGLLAGGSDQRKDGCALGF HHHHHHCCCEEEECCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure MRDFFRVGRDPVLAREAMIATSHPLSTAAGLEILSAGGTAVDAALAAVAVQSVVDPLMTG CCCHHHCCCCCHHHHHHHHHCCCCCCHHHCHHHEECCCHHHHHHHHHHHHHHHHHHHHHC IGGDCFALYAPAKGDVVALNGSGRAPLAASVSRLKALGVGEITQTSPHAITVPGAVGAWT CCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHH KLHGDYGRLPLATLFARAIAYAEGGYPVTPRVAHDWAREAALVAGDSGAAAVFLPDGRAP HCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCEEEEECCCCCEEEEECCCCCC VAGARHAQPKLGDQLRAIARDGAAAFYLGPTAEALVAYLQGLGGLHTLDDFACGLEDAEY CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHCCCCCCHH VTPISTIYRGHEVFECPPNGQGLAALMILNILSGFDLSDDLALADRLHLQAEATKLAYYH HCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEE RDALIADPAHLPYPPDALLAPEVAETLRRRIRMDRVLAPALWTEPEHKDTVYLCVVDGQG CCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC NAVSLINSIFHGFGSTHLDPATGILLHSRGASFRVIEGHPNAIGPRKRPMHTIIPGMVRK CHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHCCHHHHC DGKTVMPFGVMGGQYQAAGHAAFLSGVLDRRLDVQQAIDAPRAFGFGGTLEVEPTVEAGV CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEECCCHHHHH LAALAARGHRVTTAANPIGGAQAIWIDPQSGLLAGGSDQRKDGCALGF HHHHHHCCCEEEECCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]