| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592687
Identifier: 83592687
GI number: 83592687
Start: 1592585
End: 1593955
Strand: Direct
Name: 83592687
Synonym: Rru_A1351
Alternate gene names: NA
Gene position: 1592585-1593955 (Clockwise)
Preceding gene: 83592686
Following gene: 83592688
Centisome position: 36.59
GC content: 65.43
Gene sequence:
>1371_bases ATGAGGACTGCGGACAGGATGGCGATGCCGAGGGCGTCGTCGGGACTGGCGGCCGACACGATCAAGGTTTTCGCCTGTAC GGCGCTTTGCGTGCTTGTCGCCGAGACGATCGGCAATGTGAGCGTTCCCTTGGGCGGCAGCTACAAGGTGGTGCTGCTGC CGCTGCTTTGGGCGCTTTTGCTGGGGGCCGTCTGGGGCTTGGCGGCCAACCGCCTGCCCGCGCCGGTGCGCATCGCCAAA CGCCATCAAACCCTGGCCGCCTTGCTGCTGCAGCCGGCCTTGATGTTGTTCATCGGCAAGTTGGGGCTGATGGTTGGCGG CAATCTGCCCAAGATTTTCGATGCGGGCTGGGCGCTGGTTTTCCAGGAGTTCGGTCATTTCTTCGGCACGATGATCTTCG GCCTGCCCGTCGCCCTGTTGCTGGGCATCAAGCGCGAGGCGATCGGCGCCACTTTCTCGGTCGGTCGCGAGCCCAGCCTT GCCATCATCGGCGAGAAATACGGCATGGACAGCCCCGAGGGCCGGGGCGTGCTAGCCGAATACATGACCGGAACGATCTT CGGCGCCATCTTCATTTCGATCTTCGCCGGGTTCATCGCCGGCCTTGGCCTGTTTGATCCCCGCGCCCTGGCGATGGGGG CGGGCGTTGGCTCGGGCAGCCTGATGGCCGCCGCCTCGGGCGCTATCGCCGCCTTGCAAACCCCGGAGATCGCCAAGGAC GTGGTGACCTTCGCCGCCGCCAGCAATCTGGTGACGACGACCATCGGCACCTATTTCACCTTGTTCTTGTCGTTGCCCTT CACCGTCTGGGCCTATGGGGTTCTCGAGCCCATTCTTGGCCGCTTCGGCCGCGCGGCCTCTCCGGCGGCCGAGCCCGCCG CCGCTGCGGCCAAGACCGCCGCCGCCGCGCCGCAAGAGGCCGCGCCCGCCGCCAAGCTGTCGCCGGCGACCATCCTGACG GTTTGGATCATCGCCGGTCTGATGGCCCTGATTGGCAATACCATCACCTACAAGATCATCCCCGATGCCGCTGTTTTCGC CGGGCTGGCGATCCTGCTTGGCACCGTGATCGTCGGCTATGGCGCCTATGTGGCCACCCGCAAGGTGGTTCCCGCCGTTG TCTGGGTGTCGTTGGTCGCCATGGCCCTGACCTATCCCGGCACGCCCTATGCCGCCGAAATCACCGCGCTGACCGGCAAG CTCAACTTCATGGCTCTGGCGACGCCGCTGCTGGCTTTCGCCGGACTGTCGATCGCCAAGGACGTTCCCGCCTTCCGCAA GCTGGGCTGGCGCATCGTCGTCGTTTCGCTGATGGCCAATGCCGGCACCTTCCTGGGCGCCACCCTGATCGCCCAATTCT TCATGCACTGA
Upstream 100 bases:
>100_bases TTCACGGCGGCGTTCACGCACGCGACGCCGCCGATACGGCAAAACGATACTCCCTCCGGGCGCGCGGCCCGGGCGACCAC GCATCATGACGAGGGTTTCC
Downstream 100 bases:
>100_bases GCCAGACTGAGACCCTCGGGCCCGGTGCGCGCTTCTGCGCCGCCGGGCCTTTTCTTTTGGCGAGGGCGGGCGGGGAACCC GGGGGCGGGCTTGGCGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MRTADRMAMPRASSGLAADTIKVFACTALCVLVAETIGNVSVPLGGSYKVVLLPLLWALLLGAVWGLAANRLPAPVRIAK RHQTLAALLLQPALMLFIGKLGLMVGGNLPKIFDAGWALVFQEFGHFFGTMIFGLPVALLLGIKREAIGATFSVGREPSL AIIGEKYGMDSPEGRGVLAEYMTGTIFGAIFISIFAGFIAGLGLFDPRALAMGAGVGSGSLMAAASGAIAALQTPEIAKD VVTFAAASNLVTTTIGTYFTLFLSLPFTVWAYGVLEPILGRFGRAASPAAEPAAAAAKTAAAAPQEAAPAAKLSPATILT VWIIAGLMALIGNTITYKIIPDAAVFAGLAILLGTVIVGYGAYVATRKVVPAVVWVSLVAMALTYPGTPYAAEITALTGK LNFMALATPLLAFAGLSIAKDVPAFRKLGWRIVVVSLMANAGTFLGATLIAQFFMH
Sequences:
>Translated_456_residues MRTADRMAMPRASSGLAADTIKVFACTALCVLVAETIGNVSVPLGGSYKVVLLPLLWALLLGAVWGLAANRLPAPVRIAK RHQTLAALLLQPALMLFIGKLGLMVGGNLPKIFDAGWALVFQEFGHFFGTMIFGLPVALLLGIKREAIGATFSVGREPSL AIIGEKYGMDSPEGRGVLAEYMTGTIFGAIFISIFAGFIAGLGLFDPRALAMGAGVGSGSLMAAASGAIAALQTPEIAKD VVTFAAASNLVTTTIGTYFTLFLSLPFTVWAYGVLEPILGRFGRAASPAAEPAAAAAKTAAAAPQEAAPAAKLSPATILT VWIIAGLMALIGNTITYKIIPDAAVFAGLAILLGTVIVGYGAYVATRKVVPAVVWVSLVAMALTYPGTPYAAEITALTGK LNFMALATPLLAFAGLSIAKDVPAFRKLGWRIVVVSLMANAGTFLGATLIAQFFMH >Mature_456_residues MRTADRMAMPRASSGLAADTIKVFACTALCVLVAETIGNVSVPLGGSYKVVLLPLLWALLLGAVWGLAANRLPAPVRIAK RHQTLAALLLQPALMLFIGKLGLMVGGNLPKIFDAGWALVFQEFGHFFGTMIFGLPVALLLGIKREAIGATFSVGREPSL AIIGEKYGMDSPEGRGVLAEYMTGTIFGAIFISIFAGFIAGLGLFDPRALAMGAGVGSGSLMAAASGAIAALQTPEIAKD VVTFAAASNLVTTTIGTYFTLFLSLPFTVWAYGVLEPILGRFGRAASPAAEPAAAAAKTAAAAPQEAAPAAKLSPATILT VWIIAGLMALIGNTITYKIIPDAAVFAGLAILLGTVIVGYGAYVATRKVVPAVVWVSLVAMALTYPGTPYAAEITALTGK LNFMALATPLLAFAGLSIAKDVPAFRKLGWRIVVVSLMANAGTFLGATLIAQFFMH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47147; Mature: 47147
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTADRMAMPRASSGLAADTIKVFACTALCVLVAETIGNVSVPLGGSYKVVLLPLLWALL CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHH LGAVWGLAANRLPAPVRIAKRHQTLAALLLQPALMLFIGKLGLMVGGNLPKIFDAGWALV HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH FQEFGHFFGTMIFGLPVALLLGIKREAIGATFSVGREPSLAIIGEKYGMDSPEGRGVLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEHHCCCCCCCCCCHHHH YMTGTIFGAIFISIFAGFIAGLGLFDPRALAMGAGVGSGSLMAAASGAIAALQTPEIAKD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHCCCCHHCCCCCHHHHH VVTFAAASNLVTTTIGTYFTLFLSLPFTVWAYGVLEPILGRFGRAASPAAEPAAAAAKTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH AAAPQEAAPAAKLSPATILTVWIIAGLMALIGNTITYKIIPDAAVFAGLAILLGTVIVGY HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH GAYVATRKVVPAVVWVSLVAMALTYPGTPYAAEITALTGKLNFMALATPLLAFAGLSIAK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DVPAFRKLGWRIVVVSLMANAGTFLGATLIAQFFMH CCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRTADRMAMPRASSGLAADTIKVFACTALCVLVAETIGNVSVPLGGSYKVVLLPLLWALL CCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHH LGAVWGLAANRLPAPVRIAKRHQTLAALLLQPALMLFIGKLGLMVGGNLPKIFDAGWALV HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH FQEFGHFFGTMIFGLPVALLLGIKREAIGATFSVGREPSLAIIGEKYGMDSPEGRGVLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEHHCCCCCCCCCCHHHH YMTGTIFGAIFISIFAGFIAGLGLFDPRALAMGAGVGSGSLMAAASGAIAALQTPEIAKD HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHCCCCHHCCCCCHHHHH VVTFAAASNLVTTTIGTYFTLFLSLPFTVWAYGVLEPILGRFGRAASPAAEPAAAAAKTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH AAAPQEAAPAAKLSPATILTVWIIAGLMALIGNTITYKIIPDAAVFAGLAILLGTVIVGY HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH GAYVATRKVVPAVVWVSLVAMALTYPGTPYAAEITALTGKLNFMALATPLLAFAGLSIAK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH DVPAFRKLGWRIVVVSLMANAGTFLGATLIAQFFMH CCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA