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The map label for this gene is mdcB [H]

Identifier: 83592655

GI number: 83592655

Start: 1557388

End: 1558311

Strand: Direct

Name: mdcB [H]

Synonym: Rru_A1319

Alternate gene names: 83592655

Gene position: 1557388-1558311 (Clockwise)

Preceding gene: 83592654

Following gene: 83592656

Centisome position: 35.78

GC content: 65.48

Gene sequence:

>924_bases
ATGGACTCCGCATTGAGGGACACCGTTCGCGATTGTCAGCCAGGGCTCTGGCGCGATCCGATTTGCTGGACGATCGGCAG
CGCCTTTGTCGCGGGCGCCCTTCTCGAAGTTTCCACCCACCCCAAGCCGGGTTTGGTCACCCCGCGGTCCAATGGATCGC
ATGCCGACATGACCTTGCAGACCTTCATGGTCTCCTCGGCCGCCATCACCCCGTGTTTTTACCAATGCGCCGAAGCCGGT
TTCGGCCATTCCGGCCCGGCCGCGACCCTTCTTCCGCTGGTTCGCGAGATCGGCCGCGAGTATGAAGCCCGCCTGCTGGC
CGCCACCGGCGGCATCAATACCCAGCGCGGCCTGCTGTTCTCGGCCGGCATCCTCTGCGCTAGCGCCGGTTTGCTGGCCC
GCGATCAAACACCGTTCAGTGTCGAGGCCCTGTTTTCCACCGCCGCCCTGATGACCAAGGGATTGTGCGCCCGGGAACTC
GCCGCCAGGGCCGTCCGCATTCCGGCCACCGCCGGTGAGCATCTGCATCAAAGCCTGGGTATTCTGGGGATCCGCGGCGA
AGTCGAAACCGGCTTCCCCACCGTCGCCCTGGCCGGTCTGCCCGCCCTCAAAGCGGCGCTCGCCGCCGGCGTCCCGCTCA
ACTGGGCCCTTGTTCACACCCTGATTTCGCTGATGTCGGTCACCGAAGACACCACGGTTCTGTGGCGCGGTGGTCCGCAA
GCCCTTGATTTCATTCGAACCGAAGCCCGCCGGGTGCTGTGCCTGGGGGGAGCGATGAGCGAGGCGGGTCGCGCCGCCAT
CGATCGGTTCGATCACGACTGCGTCGCCCGCAACCTTAGTCCGGGCGGTTCCGCCGACCTGCTGGCCGTAACGGTCGGGG
TCCATAGCCTTCTCAACGGCAGTCTTGCCCTAGGAAAAAACTGA

Upstream 100 bases:

>100_bases
TGCGTCCAACGCGGTTTTCGCGACTGGGCGACGCCTTGGGACCCGGGCTGGCGATGCTGCGTGTCAGCGATCCGCCGGCC
ATGATTTGGGCAGGCGTTTC

Downstream 100 bases:

>100_bases
TTTCGCCGGCATCGGTCCCCGATGACCGACGAAACCCGCAGCGCATGAGGAACCCATGAACATCATCGTTTACGCCGGGT
TTAGCTACTTCATTACCGCC

Product: triphosphoribosyl-dephospho-CoA synthase

Products: NA

Alternate protein names: 2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MDSALRDTVRDCQPGLWRDPICWTIGSAFVAGALLEVSTHPKPGLVTPRSNGSHADMTLQTFMVSSAAITPCFYQCAEAG
FGHSGPAATLLPLVREIGREYEARLLAATGGINTQRGLLFSAGILCASAGLLARDQTPFSVEALFSTAALMTKGLCAREL
AARAVRIPATAGEHLHQSLGILGIRGEVETGFPTVALAGLPALKAALAAGVPLNWALVHTLISLMSVTEDTTVLWRGGPQ
ALDFIRTEARRVLCLGGAMSEAGRAAIDRFDHDCVARNLSPGGSADLLAVTVGVHSLLNGSLALGKN

Sequences:

>Translated_307_residues
MDSALRDTVRDCQPGLWRDPICWTIGSAFVAGALLEVSTHPKPGLVTPRSNGSHADMTLQTFMVSSAAITPCFYQCAEAG
FGHSGPAATLLPLVREIGREYEARLLAATGGINTQRGLLFSAGILCASAGLLARDQTPFSVEALFSTAALMTKGLCAREL
AARAVRIPATAGEHLHQSLGILGIRGEVETGFPTVALAGLPALKAALAAGVPLNWALVHTLISLMSVTEDTTVLWRGGPQ
ALDFIRTEARRVLCLGGAMSEAGRAAIDRFDHDCVARNLSPGGSADLLAVTVGVHSLLNGSLALGKN
>Mature_307_residues
MDSALRDTVRDCQPGLWRDPICWTIGSAFVAGALLEVSTHPKPGLVTPRSNGSHADMTLQTFMVSSAAITPCFYQCAEAG
FGHSGPAATLLPLVREIGREYEARLLAATGGINTQRGLLFSAGILCASAGLLARDQTPFSVEALFSTAALMTKGLCAREL
AARAVRIPATAGEHLHQSLGILGIRGEVETGFPTVALAGLPALKAALAAGVPLNWALVHTLISLMSVTEDTTVLWRGGPQ
ALDFIRTEARRVLCLGGAMSEAGRAAIDRFDHDCVARNLSPGGSADLLAVTVGVHSLLNGSLALGKN

Specific function: Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase [H]

COG id: COG1767

COG function: function code H; Triphosphoribosyl-dephospho-CoA synthetase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitG/MdcB family [H]

Homologues:

Organism=Escherichia coli, GI1786830, Length=260, Percent_Identity=40.7692307692308, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002736 [H]

Pfam domain/function: PF01874 CitG [H]

EC number: =2.7.8.25 [H]

Molecular weight: Translated: 31989; Mature: 31989

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSALRDTVRDCQPGLWRDPICWTIGSAFVAGALLEVSTHPKPGLVTPRSNGSHADMTLQ
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCEECCCCCCCCCHHHHH
TFMVSSAAITPCFYQCAEAGFGHSGPAATLLPLVREIGREYEARLLAATGGINTQRGLLF
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHH
SAGILCASAGLLARDQTPFSVEALFSTAALMTKGLCARELAARAVRIPATAGEHLHQSLG
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHC
ILGIRGEVETGFPTVALAGLPALKAALAAGVPLNWALVHTLISLMSVTEDTTVLWRGGPQ
EEEECCCCCCCCCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHH
ALDFIRTEARRVLCLGGAMSEAGRAAIDRFDHDCVARNLSPGGSADLLAVTVGVHSLLNG
HHHHHHHHHHEEEEECCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
SLALGKN
CCCCCCC
>Mature Secondary Structure
MDSALRDTVRDCQPGLWRDPICWTIGSAFVAGALLEVSTHPKPGLVTPRSNGSHADMTLQ
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCEECCCCCCCCCHHHHH
TFMVSSAAITPCFYQCAEAGFGHSGPAATLLPLVREIGREYEARLLAATGGINTQRGLLF
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHH
SAGILCASAGLLARDQTPFSVEALFSTAALMTKGLCARELAARAVRIPATAGEHLHQSLG
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHC
ILGIRGEVETGFPTVALAGLPALKAALAAGVPLNWALVHTLISLMSVTEDTTVLWRGGPQ
EEEECCCCCCCCCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHH
ALDFIRTEARRVLCLGGAMSEAGRAAIDRFDHDCVARNLSPGGSADLLAVTVGVHSLLNG
HHHHHHHHHHEEEEECCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
SLALGKN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9128730 [H]