Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is 83592654

Identifier: 83592654

GI number: 83592654

Start: 1556456

End: 1556872

Strand: Direct

Name: 83592654

Synonym: Rru_A1318

Alternate gene names: NA

Gene position: 1556456-1556872 (Clockwise)

Preceding gene: 83592653

Following gene: 83592655

Centisome position: 35.76

GC content: 58.27

Gene sequence:

>417_bases
ATGGATATCAATCCCAATCGCCTCGGCAAGGTCGCGATCATCGCCGCGATCAGCTCCCGCGAGGAAGAAGAGGAGTTCAA
GGCCTATCTTGCGGAAAACAGCAAAATTAAACTTGCCGTTACGTTCGTCAGTGGCGTGCGGACCGATGTAACGAAAAGCT
TCGTCAAGTCGATCGTCGCCTGCGCCCTGCAAGGCCATGTCATTCGCCACCAGCACAACGAATTGCACGGCGTCATTCAT
GCCGGTCTGGAATGCCTGAAGGGCATCAGCGCCGATGTGGCGGCGGAGGCCAGCCTCAAGCTCAAGGTCGCCGTGGTCAA
TGACGGCAAATGGGTCGCCGTCGCCGCCCATGGCGAGTCGGCTTTCCATCCCGAGACCAATCACGAGCGCATGGGCTTCG
GCGTCATGCATATCTGA

Upstream 100 bases:

>100_bases
GAGGGAGTGGAGGAATATCGCGACCCTGTTCGGGGCGGTCCGTGGCAGTCCAATCGGGCTATCACCGGCGCCCCGCTGCC
GTGCAAGAGGATCCCCCACA

Downstream 100 bases:

>100_bases
GCCCGGTCAGGGCCTTGATATCCACAGATTTTTCGCGGAAATTAGGCCATAGGGGTGGGGCGATGAGGTCCAAAAGTCGT
GGTTTGGACCTCTCTTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MDINPNRLGKVAIIAAISSREEEEEFKAYLAENSKIKLAVTFVSGVRTDVTKSFVKSIVACALQGHVIRHQHNELHGVIH
AGLECLKGISADVAAEASLKLKVAVVNDGKWVAVAAHGESAFHPETNHERMGFGVMHI

Sequences:

>Translated_138_residues
MDINPNRLGKVAIIAAISSREEEEEFKAYLAENSKIKLAVTFVSGVRTDVTKSFVKSIVACALQGHVIRHQHNELHGVIH
AGLECLKGISADVAAEASLKLKVAVVNDGKWVAVAAHGESAFHPETNHERMGFGVMHI
>Mature_138_residues
MDINPNRLGKVAIIAAISSREEEEEFKAYLAENSKIKLAVTFVSGVRTDVTKSFVKSIVACALQGHVIRHQHNELHGVIH
AGLECLKGISADVAAEASLKLKVAVVNDGKWVAVAAHGESAFHPETNHERMGFGVMHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14919; Mature: 14919

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINPNRLGKVAIIAAISSREEEEEFKAYLAENSKIKLAVTFVSGVRTDVTKSFVKSIVA
CCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHH
CALQGHVIRHQHNELHGVIHAGLECLKGISADVAAEASLKLKVAVVNDGKWVAVAAHGES
HHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCC
AFHPETNHERMGFGVMHI
CCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MDINPNRLGKVAIIAAISSREEEEEFKAYLAENSKIKLAVTFVSGVRTDVTKSFVKSIVA
CCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHH
CALQGHVIRHQHNELHGVIHAGLECLKGISADVAAEASLKLKVAVVNDGKWVAVAAHGES
HHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCC
AFHPETNHERMGFGVMHI
CCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA