Click here to switch to the map view.

The map label for this gene is ydiS [C]

Identifier: 83592653

GI number: 83592653

Start: 1554345

End: 1555970

Strand: Direct

Name: ydiS [C]

Synonym: Rru_A1317

Alternate gene names: 83592653

Gene position: 1554345-1555970 (Clockwise)

Preceding gene: 83592652

Following gene: 83592654

Centisome position: 35.71

GC content: 66.85

Gene sequence:

>1626_bases
ATGGATCGTGAGACGATGAGCTTTGACGTGGTGGTGGTGGGGGGCGGCCCCTCCGGGCTGGCCAGCGCCATTCGCCTGAA
GCAATTGCGCCCCGACACCTCGGTTTGTTTGATCGAGAAGGGGGCGGAGATCGGCGCCCATATCCTGTCGGGCGCGGTGA
TCGAACCCCGGGCCCTGGATGAATTGCTGCCCGATTGGGCCGAGAGCGCCGAGCGCGGCGAGGCGCCCTTCGACTGTCCG
GCCCGCGAGGATCGCCTGTTGCTGTTAACCCGACGGCGGGCCTTTCGCCTGCCCTTGCCGCGCGAAATGAACAACCATGG
CAATTACATCGTCAGCCTGGGGGTGCTCTGCCGCTGGCTGGCGGCGCGGGCCGAGGCCTTGGGGGTCGAGATCTTTCCCG
GCTTCGCCGCCGCCGAGGTGCTTTATGACGGGACCGGCGCCGTCTGCGGCGTGGCCACCGGCGACATGGGGGTGGGCCGC
GATGGTCGGCCGACCGCCGCCCATACGCCCGGCGTCGCCTTGCTCGCCCGCCAGACCCTGTTCGCCGAGGGCTGCCGGGG
ATCGTTGAGCGCCCAACTCGGCGATCGCTTCGCCCTGCGCCGCGCCTGCGATCCCCAGGCCTATGGCCTTGGCCTAAAGG
AACTGTGGGAGATTCCGGCCGAGAACCATCAGCCGGGATTGATCCTGCACACCGCCGGTTGGCCCTTGCCGTCCGATACC
TATGGCGGATCGTTCCTCTATCACCTGGGAACCAATCAGGTGGCGGTCGGCTATGTGGTGGCCCTTGATTACGCCAATCC
CTATCTGTCGCCCTTCGAGGAATTCCAGCGTCACAAGACCCATCCGGCGATCGCCGACCATCTGCGCGGCGGGCGGCGCA
TCGCCTATGGGGCGCGGGCGCTTTCGGAAGGCGGGCTGCAATCCCTGCCGCAACTGACCTTTCCCGGCGGGGCGCTGATC
GGCGATACCGCCGGTTTCCTCAATGTTCCCAAGATCAAGGGCACCCATGCGGCGATGAAATCGGCAATGCTGGCGGCCGA
GGCGGTGGTCCGGGCCTTGGATGAGGGCAGGGTGGAGGCTTTGGGCTACACCCCGGCCTTCGCCGCCAGCTGGCTGCACA
AGGAATTGCACGCCGTGCGCAATGTGCGGCCCAGCTTCCGCTGGGGGCGGTGGGCCGGCTTCGCCTATGCGGGACTGGAA
AGTGTCGTTCTGCGCGGCAAGGCGCCCTGGACCCTGCGCAACCGCGCCGACCACCTGCACCTGGGCAAGGCGGCCGATCA
CCGACCCATCGACTATGCCAAACCCGATGGCGTGCTGACCTTCGACCGCCTGTCCTCGGTCTATCTGTCCAACACCAATC
ACGTCGAAGACCAACCCTGCCACCTGCGTCTGAAAGACCCCGAGGTGGCGATCGCCACCAATCTGGCGGTTTTCGACGCC
CCCGAGCAGCGCTATTGCCCGGCCGGCGTCTATGAGGTGGTGCGCGAGGGCGCGGCCGAGCCGCGCCTGCAGATCAACGC
CCAGAACTGCCTGCATTGCAAAACCTGCGACATCAAGGATCCCACCCAGAACATTGTCTGGACCGTGCCCGAAGGCGGCG
GCGGCCCGGCCTATTCGGCGATGTGA

Upstream 100 bases:

>100_bases
TCATTCTAGATAAAAATATTAGACAGAAATTCTAAAAATTCCCCCGGTCCAACCCGGGGCAAGGCCGGCGACAAGGCCTG
GAACAAGGGAGGAGACGGCG

Downstream 100 bases:

>100_bases
GCCCACGCGGGGAGCCGGGGCCATATCGTTGTCGATCGTCGTCAGCCGCCCCGAACTTCTCCCACCGCCCTTCTCGGCTG
CCCGAGGGCGATGTGGGCCG

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MDRETMSFDVVVVGGGPSGLASAIRLKQLRPDTSVCLIEKGAEIGAHILSGAVIEPRALDELLPDWAESAERGEAPFDCP
AREDRLLLLTRRRAFRLPLPREMNNHGNYIVSLGVLCRWLAARAEALGVEIFPGFAAAEVLYDGTGAVCGVATGDMGVGR
DGRPTAAHTPGVALLARQTLFAEGCRGSLSAQLGDRFALRRACDPQAYGLGLKELWEIPAENHQPGLILHTAGWPLPSDT
YGGSFLYHLGTNQVAVGYVVALDYANPYLSPFEEFQRHKTHPAIADHLRGGRRIAYGARALSEGGLQSLPQLTFPGGALI
GDTAGFLNVPKIKGTHAAMKSAMLAAEAVVRALDEGRVEALGYTPAFAASWLHKELHAVRNVRPSFRWGRWAGFAYAGLE
SVVLRGKAPWTLRNRADHLHLGKAADHRPIDYAKPDGVLTFDRLSSVYLSNTNHVEDQPCHLRLKDPEVAIATNLAVFDA
PEQRYCPAGVYEVVREGAAEPRLQINAQNCLHCKTCDIKDPTQNIVWTVPEGGGGPAYSAM

Sequences:

>Translated_541_residues
MDRETMSFDVVVVGGGPSGLASAIRLKQLRPDTSVCLIEKGAEIGAHILSGAVIEPRALDELLPDWAESAERGEAPFDCP
AREDRLLLLTRRRAFRLPLPREMNNHGNYIVSLGVLCRWLAARAEALGVEIFPGFAAAEVLYDGTGAVCGVATGDMGVGR
DGRPTAAHTPGVALLARQTLFAEGCRGSLSAQLGDRFALRRACDPQAYGLGLKELWEIPAENHQPGLILHTAGWPLPSDT
YGGSFLYHLGTNQVAVGYVVALDYANPYLSPFEEFQRHKTHPAIADHLRGGRRIAYGARALSEGGLQSLPQLTFPGGALI
GDTAGFLNVPKIKGTHAAMKSAMLAAEAVVRALDEGRVEALGYTPAFAASWLHKELHAVRNVRPSFRWGRWAGFAYAGLE
SVVLRGKAPWTLRNRADHLHLGKAADHRPIDYAKPDGVLTFDRLSSVYLSNTNHVEDQPCHLRLKDPEVAIATNLAVFDA
PEQRYCPAGVYEVVREGAAEPRLQINAQNCLHCKTCDIKDPTQNIVWTVPEGGGGPAYSAM
>Mature_541_residues
MDRETMSFDVVVVGGGPSGLASAIRLKQLRPDTSVCLIEKGAEIGAHILSGAVIEPRALDELLPDWAESAERGEAPFDCP
AREDRLLLLTRRRAFRLPLPREMNNHGNYIVSLGVLCRWLAARAEALGVEIFPGFAAAEVLYDGTGAVCGVATGDMGVGR
DGRPTAAHTPGVALLARQTLFAEGCRGSLSAQLGDRFALRRACDPQAYGLGLKELWEIPAENHQPGLILHTAGWPLPSDT
YGGSFLYHLGTNQVAVGYVVALDYANPYLSPFEEFQRHKTHPAIADHLRGGRRIAYGARALSEGGLQSLPQLTFPGGALI
GDTAGFLNVPKIKGTHAAMKSAMLAAEAVVRALDEGRVEALGYTPAFAASWLHKELHAVRNVRPSFRWGRWAGFAYAGLE
SVVLRGKAPWTLRNRADHLHLGKAADHRPIDYAKPDGVLTFDRLSSVYLSNTNHVEDQPCHLRLKDPEVAIATNLAVFDA
PEQRYCPAGVYEVVREGAAEPRLQINAQNCLHCKTCDIKDPTQNIVWTVPEGGGGPAYSAM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=562, Percent_Identity=54.9822064056939, Blast_Score=603, Evalue=1e-172,
Organism=Escherichia coli, GI1787991, Length=331, Percent_Identity=29.0030211480363, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1786227, Length=334, Percent_Identity=26.0479041916168, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI87082155, Length=342, Percent_Identity=29.2397660818713, Blast_Score=83, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI25144720, Length=560, Percent_Identity=53.0357142857143, Blast_Score=572, Evalue=1e-163,
Organism=Saccharomyces cerevisiae, GI6324932, Length=571, Percent_Identity=45.3590192644483, Blast_Score=508, Evalue=1e-144,
Organism=Drosophila melanogaster, GI24652256, Length=559, Percent_Identity=53.6672629695885, Blast_Score=587, Evalue=1e-168,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 58491; Mature: 58491

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRETMSFDVVVVGGGPSGLASAIRLKQLRPDTSVCLIEKGAEIGAHILSGAVIEPRALD
CCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCCHHHH
ELLPDWAESAERGEAPFDCPAREDRLLLLTRRRAFRLPLPREMNNHGNYIVSLGVLCRWL
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHCCCCCHHCCCCCCEEEEHHHHHHHH
AARAEALGVEIFPGFAAAEVLYDGTGAVCGVATGDMGVGRDGRPTAAHTPGVALLARQTL
HHHHHHCCEEEECCHHEEHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
FAEGCRGSLSAQLGDRFALRRACDPQAYGLGLKELWEIPAENHQPGLILHTAGWPLPSDT
HHHCCCCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCC
YGGSFLYHLGTNQVAVGYVVALDYANPYLSPFEEFQRHKTHPAIADHLRGGRRIAYGARA
CCCEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHCCCCEEEHHHHH
LSEGGLQSLPQLTFPGGALIGDTAGFLNVPKIKGTHAAMKSAMLAAEAVVRALDEGRVEA
HHCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
LGYTPAFAASWLHKELHAVRNVRPSFRWGRWAGFAYAGLESVVLRGKAPWTLRNRADHLH
ECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEEE
LGKAADHRPIDYAKPDGVLTFDRLSSVYLSNTNHVEDQPCHLRLKDPEVAIATNLAVFDA
CCCCCCCCCCCCCCCCCEEEHHHHHHHEECCCCCCCCCCCEEEECCCCEEEEEEEEEECC
PEQRYCPAGVYEVVREGAAEPRLQINAQNCLHCKTCDIKDPTQNIVWTVPEGGGGPAYSA
CHHCCCCHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCC
M
C
>Mature Secondary Structure
MDRETMSFDVVVVGGGPSGLASAIRLKQLRPDTSVCLIEKGAEIGAHILSGAVIEPRALD
CCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCCHHHH
ELLPDWAESAERGEAPFDCPAREDRLLLLTRRRAFRLPLPREMNNHGNYIVSLGVLCRWL
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHCCCCCHHCCCCCCEEEEHHHHHHHH
AARAEALGVEIFPGFAAAEVLYDGTGAVCGVATGDMGVGRDGRPTAAHTPGVALLARQTL
HHHHHHCCEEEECCHHEEHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
FAEGCRGSLSAQLGDRFALRRACDPQAYGLGLKELWEIPAENHQPGLILHTAGWPLPSDT
HHHCCCCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCC
YGGSFLYHLGTNQVAVGYVVALDYANPYLSPFEEFQRHKTHPAIADHLRGGRRIAYGARA
CCCEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHCCCCEEEHHHHH
LSEGGLQSLPQLTFPGGALIGDTAGFLNVPKIKGTHAAMKSAMLAAEAVVRALDEGRVEA
HHCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
LGYTPAFAASWLHKELHAVRNVRPSFRWGRWAGFAYAGLESVVLRGKAPWTLRNRADHLH
ECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEEE
LGKAADHRPIDYAKPDGVLTFDRLSSVYLSNTNHVEDQPCHLRLKDPEVAIATNLAVFDA
CCCCCCCCCCCCCCCCCEEEHHHHHHHEECCCCCCCCCCCEEEECCCCEEEEEEEEEECC
PEQRYCPAGVYEVVREGAAEPRLQINAQNCLHCKTCDIKDPTQNIVWTVPEGGGGPAYSA
CHHCCCCHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCC
M
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]