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The map label for this gene is xylB [H]

Identifier: 83592603

GI number: 83592603

Start: 1488038

End: 1489543

Strand: Direct

Name: xylB [H]

Synonym: Rru_A1267

Alternate gene names: 83592603

Gene position: 1488038-1489543 (Clockwise)

Preceding gene: 83592602

Following gene: 83592604

Centisome position: 34.19

GC content: 67.53

Gene sequence:

>1506_bases
ATGTCCGCTGCCCAAGGTCGTCAGGTGATCGGTCTCGATATCGGGACCACCTCGACCATCGCCATCCTGGTCCGCCTGCC
CGATACCGTGGTCGCCGTCGCCTCGCGGCCGACCACCTTGTCTTCGCCCCATCCCGGATGGGCCGAGGAGGATCCGGCCC
AATGGTGGGACAACGCCCGCGCCGTGCTCGCCGAATTGAAGACGACGGCCGGCGAAAGCGACTGGCGGCCCGGCGGGATC
TGCGTGACCGGCATGTTACCCGCCGTGGTGCTGCTCGACGACCGGGGCGCGGTGCTCCGCCCGTCGATCCAGCAAAGCGA
CGGGCGTTGTGGCGACGAGGTGGCCGAATTGCGGGCCGAGGTCGATAGCGAGGCCTTTCTCGCCCGCACCGGCAACGGCG
TGACCCAACAATTGGTCACCGCCAAGCTGCGCTGGATCGAGCGTCACGAGCCGGCGGTTTTTGGCGCCATCGCCACCGTC
TGCGGCTCTTACGATTACATCAACATGCTGCTGACCGGGGAGCGGGTCGTTGACCGCAACTGGGCCCTGGAAGGCGGCTT
CATCGATCTTGCGAGCGGCACCGTCGAAGCCGATCTGGTGGCGCTCGCCCATATCCCCCCCTCGGCCGTGCCGCCTGCCC
ACCCCACCCATAGGGTGCTGGGGGCGGTCACCGCCGAGGCCGCCGCCCTGACCGGCCTGCCCACCGGCCTCCCGGTGTAC
GGCGGGGCGGCGGACCACATCGCCTCGGCCCTGGCCGCTGGCATCACCCGGCCCGGCGATGTGCTTTTGAAGTTCGGCGG
CGCCGGCGACATCATCGTCGCTTCGGCCACCGCCAAAAGCGATCCCCGGCTTTACCTGGATTACCACCTTGTGCCCGGGC
TCTATGCCCCCAACGGCTGCATGGCGGCGACCGGTTCGGCGCTGAACTGGCTGGCCAAGCTGCTGGCCCCCGAAGCCGGC
GAGGCGGCCCATGCCCAGCTTGATGCCCTGGCGGCCGAGGTGCCGGCCGGAGCCGATGGTCTGGTCTGTCTGCCCTATTT
CCTGGGCGAGAAAACGCCGATCCATGATCCCTTCGCCTCGGGAACCTTCACTGGGCTTAGCCTCAGCCATACCCGGGGCC
ATCTGTGGCGTGCCCTGCTGGAAGCCGTGGCCCTGGCCTTTCGCCACCATGTCGCGGTTTTGGACGATATCGGCCACGCC
CCGCAGCGCTTCTTCGCCTCCGATGGCGGCACGCGCAGCCGGGTGTGGATGGGGATCATGGCCGATGTTTTGCAGCGGCC
CGTCCAGCTTCTGGCCAATCCTTTGGGCTCGGCGGTCGGGGCGGCCTGGGTTGCGGCGATCGGCGGCGGTGACGATCTAG
GGTGGGACGACGTGACGGCTTTGGTGCGCACGGGCGAGAAAATAACACCCGATCCGGCCAAGGCCGAGGTTTATGATCGC
CTGTACCGGGACTTCTCGGCCCTTTATGCCACTCTTCATCCCTTCTTTCATCGGAGTAGACCATGA

Upstream 100 bases:

>100_bases
CGCGTCTCGCGCTTCATGGACAAGGTCGCGACCCTGGTCTGACCCGCGCCCCGGCGCCGCCGTCTGGAGGTCCTTCTGGG
GGCCCTTCTGGAGAATTGTC

Downstream 100 bases:

>100_bases
CGCCTCCCAAGGCCATCGCCTGGGATATCGACGGAACCCTGATCGATAGCGAACCCACCCACCTGCGTGCCCTGATAACC
GTTTCCGCCGCCCATGGGGT

Product: carbohydrate kinase, FGGY

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MSAAQGRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDWRPGGI
CVTGMLPAVVLLDDRGAVLRPSIQQSDGRCGDEVAELRAEVDSEAFLARTGNGVTQQLVTAKLRWIERHEPAVFGAIATV
CGSYDYINMLLTGERVVDRNWALEGGFIDLASGTVEADLVALAHIPPSAVPPAHPTHRVLGAVTAEAAALTGLPTGLPVY
GGAADHIASALAAGITRPGDVLLKFGGAGDIIVASATAKSDPRLYLDYHLVPGLYAPNGCMAATGSALNWLAKLLAPEAG
EAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGHLWRALLEAVALAFRHHVAVLDDIGHA
PQRFFASDGGTRSRVWMGIMADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDVTALVRTGEKITPDPAKAEVYDR
LYRDFSALYATLHPFFHRSRP

Sequences:

>Translated_501_residues
MSAAQGRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDWRPGGI
CVTGMLPAVVLLDDRGAVLRPSIQQSDGRCGDEVAELRAEVDSEAFLARTGNGVTQQLVTAKLRWIERHEPAVFGAIATV
CGSYDYINMLLTGERVVDRNWALEGGFIDLASGTVEADLVALAHIPPSAVPPAHPTHRVLGAVTAEAAALTGLPTGLPVY
GGAADHIASALAAGITRPGDVLLKFGGAGDIIVASATAKSDPRLYLDYHLVPGLYAPNGCMAATGSALNWLAKLLAPEAG
EAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGHLWRALLEAVALAFRHHVAVLDDIGHA
PQRFFASDGGTRSRVWMGIMADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDVTALVRTGEKITPDPAKAEVYDR
LYRDFSALYATLHPFFHRSRP
>Mature_500_residues
SAAQGRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDWRPGGIC
VTGMLPAVVLLDDRGAVLRPSIQQSDGRCGDEVAELRAEVDSEAFLARTGNGVTQQLVTAKLRWIERHEPAVFGAIATVC
GSYDYINMLLTGERVVDRNWALEGGFIDLASGTVEADLVALAHIPPSAVPPAHPTHRVLGAVTAEAAALTGLPTGLPVYG
GAADHIASALAAGITRPGDVLLKFGGAGDIIVASATAKSDPRLYLDYHLVPGLYAPNGCMAATGSALNWLAKLLAPEAGE
AAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGHLWRALLEAVALAFRHHVAVLDDIGHAP
QRFFASDGGTRSRVWMGIMADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDVTALVRTGEKITPDPAKAEVYDRL
YRDFSALYATLHPFFHRSRP

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI88196792, Length=511, Percent_Identity=23.4833659491194, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI41393575, Length=449, Percent_Identity=22.0489977728285, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI42794763, Length=468, Percent_Identity=21.7948717948718, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI4504007, Length=468, Percent_Identity=22.008547008547, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI1789987, Length=490, Percent_Identity=30, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1790005, Length=501, Percent_Identity=26.9461077844311, Blast_Score=151, Evalue=8e-38,
Organism=Escherichia coli, GI1787789, Length=509, Percent_Identity=26.3261296660118, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1789168, Length=506, Percent_Identity=25.6916996047431, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1789138, Length=278, Percent_Identity=27.3381294964029, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1790361, Length=461, Percent_Identity=21.4750542299349, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24655555, Length=474, Percent_Identity=23.2067510548523, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24655560, Length=474, Percent_Identity=23.2067510548523, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24655570, Length=474, Percent_Identity=23.2067510548523, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24655574, Length=474, Percent_Identity=23.2067510548523, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24655565, Length=474, Percent_Identity=23.2067510548523, Blast_Score=82, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 52675; Mature: 52544

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAQGRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNAR
CCCCCCCEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
AVLAELKTTAGESDWRPGGICVTGMLPAVVLLDDRGAVLRPSIQQSDGRCGDEVAELRAE
HHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHH
VDSEAFLARTGNGVTQQLVTAKLRWIERHEPAVFGAIATVCGSYDYINMLLTGERVVDRN
CCCHHHEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHEEEEEECCCCCCCC
WALEGGFIDLASGTVEADLVALAHIPPSAVPPAHPTHRVLGAVTAEAAALTGLPTGLPVY
CEECCCEEEECCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
GGAADHIASALAAGITRPGDVLLKFGGAGDIIVASATAKSDPRLYLDYHLVPGLYAPNGC
CCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCC
MAATGSALNWLAKLLAPEAGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFAS
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCC
GTFTGLSLSHTRGHLWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSRVWMGIM
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHH
ADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDVTALVRTGEKITPDPAKAEVYDR
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH
LYRDFSALYATLHPFFHRSRP
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAAQGRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNAR
CCCCCCEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
AVLAELKTTAGESDWRPGGICVTGMLPAVVLLDDRGAVLRPSIQQSDGRCGDEVAELRAE
HHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHH
VDSEAFLARTGNGVTQQLVTAKLRWIERHEPAVFGAIATVCGSYDYINMLLTGERVVDRN
CCCHHHEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHEEEEEECCCCCCCC
WALEGGFIDLASGTVEADLVALAHIPPSAVPPAHPTHRVLGAVTAEAAALTGLPTGLPVY
CEECCCEEEECCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
GGAADHIASALAAGITRPGDVLLKFGGAGDIIVASATAKSDPRLYLDYHLVPGLYAPNGC
CCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCC
MAATGSALNWLAKLLAPEAGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFAS
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCC
GTFTGLSLSHTRGHLWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSRVWMGIM
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHH
ADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDVTALVRTGEKITPDPAKAEVYDR
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH
LYRDFSALYATLHPFFHRSRP
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1660563 [H]