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The map label for this gene is sgcQ [H]

Identifier: 83592602

GI number: 83592602

Start: 1487176

End: 1487979

Strand: Direct

Name: sgcQ [H]

Synonym: Rru_A1266

Alternate gene names: 83592602

Gene position: 1487176-1487979 (Clockwise)

Preceding gene: 83592601

Following gene: 83592603

Centisome position: 34.17

GC content: 63.56

Gene sequence:

>804_bases
ATGATTTTTGATTTCCTCGGTCCCCGTAAAAAAGCGGTTATCGCCATGGCCCATATCGGCGCCTTGCCCGGCACGCCGCT
TTATGACGCCGATGGCGGCATGATGAAGCTGATCGACGATGTGGTCGGCGATATCGAGAAGCTCCAGAAGGGCGGCGTTC
ACGCCATCATGTTCGGCAACGAGAATGATCGGCCCTATCAGTTCGAGGCGCCGATCGCCAGCGTCGCGGCGATGACCGCG
ATCATCAGCGCGGTGCGGCCGATGCTCAGCGTGCCCTTTGGCGTCAACTACCTGTGGGATCCGGCGGCTTCGGTCGCCAT
CGCGGTTGCCACCGGCGCCTCCTTCGCCCGCGAGATCTTCACTGGGGTTTTCGCCTCCGACATGGGCGTGTGGTCGCCCA
ATGCCGCCGAGGCCCTGCGCCTGCGCCGCAATCTGCACCGCCCCGATCTGAAGCTGTTGTTCAACATCAATGCCGAATTC
GCCTCCTCGCTTGATAGCCGGAGCATCGGCTTGCGGGCGCGCAGCGCCATCTTCTCGTCGCTGGCCGATGCCATCTTGGT
CTCGGGTCCGCTGACCGGTCAGCCGGCCCAGGCCTCGGATCTGCGCGAGGTCCGCGAGGCGATTGGTACCGAGGTGCCGC
TGTTTGCCAATACGGGCGTGCGTTTGGAGAACGTCGACGATGTGCTGTCGATCGCCGATGGCTGCGTGATCGGCACCCAT
TTCAAGGTTGACGGCTCGACCTGGAATCGGGTGGACGGGGGGCGCGTCTCGCGCTTCATGGACAAGGTCGCGACCCTGGT
CTGA

Upstream 100 bases:

>100_bases
GGTGATTCTCGCCGACCCCGCCGAGGGGCCCGACCTGCCGCCCAACTGACCTTATCGCCGGCCGCCGGCCCGTCGGCGGT
TTCCCTGTCTGGAGACGACC

Downstream 100 bases:

>100_bases
CCCGCGCCCCGGCGCCGCCGTCTGGAGGTCCTTCTGGGGGCCCTTCTGGAGAATTGTCATGTCCGCTGCCCAAGGTCGTC
AGGTGATCGGTCTCGATATC

Product: photosystem I assembly BtpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MIFDFLGPRKKAVIAMAHIGALPGTPLYDADGGMMKLIDDVVGDIEKLQKGGVHAIMFGNENDRPYQFEAPIASVAAMTA
IISAVRPMLSVPFGVNYLWDPAASVAIAVATGASFAREIFTGVFASDMGVWSPNAAEALRLRRNLHRPDLKLLFNINAEF
ASSLDSRSIGLRARSAIFSSLADAILVSGPLTGQPAQASDLREVREAIGTEVPLFANTGVRLENVDDVLSIADGCVIGTH
FKVDGSTWNRVDGGRVSRFMDKVATLV

Sequences:

>Translated_267_residues
MIFDFLGPRKKAVIAMAHIGALPGTPLYDADGGMMKLIDDVVGDIEKLQKGGVHAIMFGNENDRPYQFEAPIASVAAMTA
IISAVRPMLSVPFGVNYLWDPAASVAIAVATGASFAREIFTGVFASDMGVWSPNAAEALRLRRNLHRPDLKLLFNINAEF
ASSLDSRSIGLRARSAIFSSLADAILVSGPLTGQPAQASDLREVREAIGTEVPLFANTGVRLENVDDVLSIADGCVIGTH
FKVDGSTWNRVDGGRVSRFMDKVATLV
>Mature_267_residues
MIFDFLGPRKKAVIAMAHIGALPGTPLYDADGGMMKLIDDVVGDIEKLQKGGVHAIMFGNENDRPYQFEAPIASVAAMTA
IISAVRPMLSVPFGVNYLWDPAASVAIAVATGASFAREIFTGVFASDMGVWSPNAAEALRLRRNLHRPDLKLLFNINAEF
ASSLDSRSIGLRARSAIFSSLADAILVSGPLTGQPAQASDLREVREAIGTEVPLFANTGVRLENVDDVLSIADGCVIGTH
FKVDGSTWNRVDGGRVSRFMDKVATLV

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=254, Percent_Identity=48.8188976377953, Blast_Score=223, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI115532828, Length=278, Percent_Identity=28.0575539568345, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24659916, Length=262, Percent_Identity=29.3893129770992, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 28518; Mature: 28518

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS00630 IMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFDFLGPRKKAVIAMAHIGALPGTPLYDADGGMMKLIDDVVGDIEKLQKGGVHAIMFGN
CCCCCCCCCHHHEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECC
ENDRPYQFEAPIASVAAMTAIISAVRPMLSVPFGVNYLWDPAASVAIAVATGASFAREIF
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEEHHCHHHHHHHH
TGVFASDMGVWSPNAAEALRLRRNLHRPDLKLLFNINAEFASSLDSRSIGLRARSAIFSS
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHH
LADAILVSGPLTGQPAQASDLREVREAIGTEVPLFANTGVRLENVDDVLSIADGCVIGTH
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEECCHHHHHHHHCCEEEEEE
FKVDGSTWNRVDGGRVSRFMDKVATLV
EEECCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFDFLGPRKKAVIAMAHIGALPGTPLYDADGGMMKLIDDVVGDIEKLQKGGVHAIMFGN
CCCCCCCCCHHHEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECC
ENDRPYQFEAPIASVAAMTAIISAVRPMLSVPFGVNYLWDPAASVAIAVATGASFAREIF
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEEHHCHHHHHHHH
TGVFASDMGVWSPNAAEALRLRRNLHRPDLKLLFNINAEFASSLDSRSIGLRARSAIFSS
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHH
LADAILVSGPLTGQPAQASDLREVREAIGTEVPLFANTGVRLENVDDVLSIADGCVIGTH
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEECCHHHHHHHHCCEEEEEE
FKVDGSTWNRVDGGRVSRFMDKVATLV
EEECCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]