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The map label for this gene is yibP [C]

Identifier: 83592569

GI number: 83592569

Start: 1455766

End: 1457241

Strand: Reverse

Name: yibP [C]

Synonym: Rru_A1233

Alternate gene names: 83592569

Gene position: 1457241-1455766 (Counterclockwise)

Preceding gene: 83592570

Following gene: 83592568

Centisome position: 33.48

GC content: 70.26

Gene sequence:

>1476_bases
TTGACCCTGGGCGGGCTTTGCTTAAGTCCCGGCGCCCAGGCGGCGGCTCCGCCGGCGCCACCGACCACCACCACGCCCAA
GGACCTCAAGGCGGTGGAGACCGCCCTGGAACGCGAGGCGCGCGAACGCGAACGCCTGGAGCGCGAGGCCGCCGCCGCCG
CCCAGGATATCGAAGGCCTGGGCGCCAAGGTGGTCGCCAGCGCCCGCCGCGTCCAAGACCACGAGGAAACCCTCTCGACG
CTTGAAATCCAGCTTGCCGACTTGCGCACCGAGGACAAGACCCTGCGCGAGGCCCTGGCGCGGCGCGATATCCAGGTCAT
CCACGTGCTGACTGCCGTGCAGCGGCTGGCCTGGCGACCGACCGAGGCGCTGCTGGTTCAGCCCGCCCCGCCCGCCGATA
CGGTGCGCGGGGCGATTTTGTTGCGCGCGGCGATTCCGCGCATCGAACAAAACGCCCGCGATATCGTCGCCCAACTGAAG
ATCCTGCGCACCCTCGACACCACCATGCGCGCCCAGCGCGCCCAGATTCGCGCAACAAGCGACTCGCTGCGCGCCGAACA
CACGGCGTTGCGCGAGATGATTGATCGCAAAAGCACCCTGGCCCGCGAAATCAAGGCCCGCACCGAAGCCGCCGCCGACC
GCATGGACCAACTGGCCCGCGAGGCCAAGGATATCCGCGACCTGATGGCCCGCCTGGAAGAGGAACGCATCCGCCGCGAA
GCCGAGGAAAAGCTCCGGGCCGAGCAGGAGGAGCGGGCCGAGAAGCAACGTCTGGCCGAGGAGGAGCGCCTGACCAAGCT
GCGCATCGCCCAGGAGGAACGCGACCGCCTGCGCCGCGCCGAAGCCGAAAGGCTGGCCGCCCTGGCCGCCCAGGCCAAGC
CGGCCGCGCCGCCCGCCTCGCAGGTGGTTCAACCCGCGCAGCCCCCGCAGGGGGCTCAACCCGCGCCCCCCCCGCAGGGG
GCTCAACCCACGCCGCCCCCACAGGTGGCCATGGCCCAGCCGACGCCACCGCCCCGCCCCGCCTCGCTGCCGCGCACCCC
GCCGCCAACGGGCGAAAGCTTCGAACGCGCCCGCGGCGCCATGCCTTTTCCGGCGCGCGGCCCGCTTGTCGGCCGCTACG
GGGAAAGGACGCCGCTTGGCGATACGCTCAAGGGCGTGCGGGTGGTCACCCGGGGCGGCGGACAGGTCGTCAGCCCCCAT
GAAGGCACGGTTGTTTTCGCCGGACCCTTCCGGGGCTATGGCAATCTCTTGATCATCGATCACGGCGGGGGATATCATAC
CCTGCTCGCGGGCCTCGGCCGGATCGACGGCGTCGTCGGACAACGGCTTGCGGCGGGCGAACCCGTGGGAATCATGCCAG
ACGTCGTCGGGGGCGGCGATGGTTCTCCTACGCTCTACGTTGAATTACGCCGCAAGGGCCAACCCATAAATCCCCTCCCC
TGGCTTACGGCAAGCAAAGGCAACGCTAGCGGATGA

Upstream 100 bases:

>100_bases
AAGACGCTGGTCGCCAAGGCCGCGGTGGCCGTCGGTGCGTCGCACTGATCCCTCGCGTCTTTTCCAGACCACAGCCCTGG
GCGCCGGGGCTGCGGTCTGG

Downstream 100 bases:

>100_bases
CCTGGAAGACTTGGATCTCGGCCAGCGCGATCGCCTTCACGGCGTTCACGGCTGGACAGCTTTATCATACCGAACAGGCC
GAGGCGGCCCGGGGAGAGGA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MTLGGLCLSPGAQAAAPPAPPTTTTPKDLKAVETALEREARERERLEREAAAAAQDIEGLGAKVVASARRVQDHEETLST
LEIQLADLRTEDKTLREALARRDIQVIHVLTAVQRLAWRPTEALLVQPAPPADTVRGAILLRAAIPRIEQNARDIVAQLK
ILRTLDTTMRAQRAQIRATSDSLRAEHTALREMIDRKSTLAREIKARTEAAADRMDQLAREAKDIRDLMARLEEERIRRE
AEEKLRAEQEERAEKQRLAEEERLTKLRIAQEERDRLRRAEAERLAALAAQAKPAAPPASQVVQPAQPPQGAQPAPPPQG
AQPTPPPQVAMAQPTPPPRPASLPRTPPPTGESFERARGAMPFPARGPLVGRYGERTPLGDTLKGVRVVTRGGGQVVSPH
EGTVVFAGPFRGYGNLLIIDHGGGYHTLLAGLGRIDGVVGQRLAAGEPVGIMPDVVGGGDGSPTLYVELRRKGQPINPLP
WLTASKGNASG

Sequences:

>Translated_491_residues
MTLGGLCLSPGAQAAAPPAPPTTTTPKDLKAVETALEREARERERLEREAAAAAQDIEGLGAKVVASARRVQDHEETLST
LEIQLADLRTEDKTLREALARRDIQVIHVLTAVQRLAWRPTEALLVQPAPPADTVRGAILLRAAIPRIEQNARDIVAQLK
ILRTLDTTMRAQRAQIRATSDSLRAEHTALREMIDRKSTLAREIKARTEAAADRMDQLAREAKDIRDLMARLEEERIRRE
AEEKLRAEQEERAEKQRLAEEERLTKLRIAQEERDRLRRAEAERLAALAAQAKPAAPPASQVVQPAQPPQGAQPAPPPQG
AQPTPPPQVAMAQPTPPPRPASLPRTPPPTGESFERARGAMPFPARGPLVGRYGERTPLGDTLKGVRVVTRGGGQVVSPH
EGTVVFAGPFRGYGNLLIIDHGGGYHTLLAGLGRIDGVVGQRLAAGEPVGIMPDVVGGGDGSPTLYVELRRKGQPINPLP
WLTASKGNASG
>Mature_490_residues
TLGGLCLSPGAQAAAPPAPPTTTTPKDLKAVETALEREARERERLEREAAAAAQDIEGLGAKVVASARRVQDHEETLSTL
EIQLADLRTEDKTLREALARRDIQVIHVLTAVQRLAWRPTEALLVQPAPPADTVRGAILLRAAIPRIEQNARDIVAQLKI
LRTLDTTMRAQRAQIRATSDSLRAEHTALREMIDRKSTLAREIKARTEAAADRMDQLAREAKDIRDLMARLEEERIRREA
EEKLRAEQEERAEKQRLAEEERLTKLRIAQEERDRLRRAEAERLAALAAQAKPAAPPASQVVQPAQPPQGAQPAPPPQGA
QPTPPPQVAMAQPTPPPRPASLPRTPPPTGESFERARGAMPFPARGPLVGRYGERTPLGDTLKGVRVVTRGGGQVVSPHE
GTVVFAGPFRGYGNLLIIDHGGGYHTLLAGLGRIDGVVGQRLAAGEPVGIMPDVVGGGDGSPTLYVELRRKGQPINPLPW
LTASKGNASG

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=125, Percent_Identity=36, Blast_Score=90, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 53122; Mature: 52991

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGGLCLSPGAQAAAPPAPPTTTTPKDLKAVETALEREARERERLEREAAAAAQDIEGL
CCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAKVVASARRVQDHEETLSTLEIQLADLRTEDKTLREALARRDIQVIHVLTAVQRLAWRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
TEALLVQPAPPADTVRGAILLRAAIPRIEQNARDIVAQLKILRTLDTTMRAQRAQIRATS
CHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLRAEHTALREMIDRKSTLAREIKARTEAAADRMDQLAREAKDIRDLMARLEEERIRRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEKLRAEQEERAEKQRLAEEERLTKLRIAQEERDRLRRAEAERLAALAAQAKPAAPPAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
QVVQPAQPPQGAQPAPPPQGAQPTPPPQVAMAQPTPPPRPASLPRTPPPTGESFERARGA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
MPFPARGPLVGRYGERTPLGDTLKGVRVVTRGGGQVVSPHEGTVVFAGPFRGYGNLLIID
CCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCEEECCCCCEEEEECCCCCCCCEEEEE
HGGGYHTLLAGLGRIDGVVGQRLAAGEPVGIMPDVVGGGDGSPTLYVELRRKGQPINPLP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
WLTASKGNASG
CEECCCCCCCC
>Mature Secondary Structure 
TLGGLCLSPGAQAAAPPAPPTTTTPKDLKAVETALEREARERERLEREAAAAAQDIEGL
CCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAKVVASARRVQDHEETLSTLEIQLADLRTEDKTLREALARRDIQVIHVLTAVQRLAWRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
TEALLVQPAPPADTVRGAILLRAAIPRIEQNARDIVAQLKILRTLDTTMRAQRAQIRATS
CHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLRAEHTALREMIDRKSTLAREIKARTEAAADRMDQLAREAKDIRDLMARLEEERIRRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEKLRAEQEERAEKQRLAEEERLTKLRIAQEERDRLRRAEAERLAALAAQAKPAAPPAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
QVVQPAQPPQGAQPAPPPQGAQPTPPPQVAMAQPTPPPRPASLPRTPPPTGESFERARGA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
MPFPARGPLVGRYGERTPLGDTLKGVRVVTRGGGQVVSPHEGTVVFAGPFRGYGNLLIID
CCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCEEECCCCCEEEEECCCCCCCCEEEEE
HGGGYHTLLAGLGRIDGVVGQRLAAGEPVGIMPDVVGGGDGSPTLYVELRRKGQPINPLP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
WLTASKGNASG
CEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]