| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is gpmI [H]
Identifier: 83592570
GI number: 83592570
Start: 1457294
End: 1458865
Strand: Reverse
Name: gpmI [H]
Synonym: Rru_A1234
Alternate gene names: 83592570
Gene position: 1458865-1457294 (Counterclockwise)
Preceding gene: 83592571
Following gene: 83592569
Centisome position: 33.52
GC content: 67.3
Gene sequence:
>1572_bases ATGACCTCCCAGATGCCACCGTTCCGACGCCCCCGTCCGGTCGTGCTTTGCATCCTTGACGGCTGGGGTCACCGCGATGA TCCGACCGATAACGCCATCGCCCTGGCCAATACCCCGACCTGGGATCGCCTGATGGCCACCTGCCCCCATTCCCTGATCG CCACCAGCGGCGCCGATGTCGGCCTGCCCGCTGGTCAAATGGGCAATTCCGAGGTCGGCCATATGAACATCGGCGCCGGC CGGGTGGTGATGCAGGATCTGCCGCGCATCGACGCCGCCCTCGCCGACGGCTCGGTCGCCCATTTCCCCGCCCTCGTGCG CTTCATCGACGCCCTGCGCGCCAGCGGCGGCACCGCCCATCTGCTGGGGCTGCTCTCGCCCGGTGGAGTCCATTCCCACC AGGACCATATCGCCAAGCTGGCCCGCGTCATCGCCGCCGCCGGGGTGCCGGTGAAGATCCACGCCTTCCTCGACGGCCGC GACACGCCGCCGCGCTCGGCGCTGGGGTTCCTTGAAACCTTCGCCGCCGCCGCCGGACCCGAGGCGCCGATCGCCACCGT TTCGGGCCGCTATTACGCCATGGACCGCGACAAGCGCTTTGACCGGGTGCGTCTGGCCTATGACGTGCTTGTCAGCGGCA AGGGCGAAAGCGCCGCCGATGCCGCCAGCGCGGTTTCCCAGTTCTACGACTCGAAGGACAAGGGCGACGAATTCGTTCTG CCCACCGCCATCGCCGGCTATGACGGGATGAAGGATGGCGATGGCGTGTTCATGGTCAATTACCGCTCCGACCGCGCCCG CGAGATCACCCAGGCCCTGCTCGACCCCACGTTCGATGGCTTTGAGCGCCAGCCGCCCCATTTCGCCGGCGCCTTGGCGA TGACCGAGTATTCCACCGCCCATAACGCCTTCATGGATGTGCTGTTCGGCCCCGAAAGCCTGAATAACATCCTGGGGCAA GTGGTGTCGGAAGCCGGGATGACCCAGTTGCGCATCGCCGAGACCGAGAAATACGCCCACGTCACCTTCTTCTTCAACGG CGGCCGGGAAACCAGTTTCCCGGGCGAGGAACGCATCCTGATTCCCAGCCCCAAGGTCGCCACCTATGACCTTCAGCCCG AAATGTCGGCCCCCGAACTGACCGACCGTCTGGTCGAGGTCATCGACGCCGGGCGCTTCGATGTCATCATCGTCAATTAC GCCAATGGCGATATGGTCGGCCATTCGGGCATCCTGGAAGCGGCGATCAAGGCGGTCGAGGCCGTCGATGGCTGCCTGGG CCGGGTCGAAGAGGCGGTGGTGCGGGCCGGGGGCACCATGCTGGTCACCGCCGACCACGGCAATGCCGAGCTGATGCGCG ATCCGGTGACCGGCGAGCCCCACACCGCCCATACCACCGGCCGCGTCGATCTGCTGCTGGTCAACGGTCCCGAGGGCGCC AGCCTCGCCGATGGCCGGCTGGCCGATCTGTCGCCGACCCTGCTCGCCCTGATCGGCCTGCCCCAGCCCGCCGAGATGAC CGGCAAGACGCTGGTCGCCAAGGCCGCGGTGGCCGTCGGTGCGTCGCACTGA
Upstream 100 bases:
>100_bases TATATAGGGGACACCCATAGGGGGGCTGGCCCGCGTGCGGGATCCCCCCGCTTTTTCCGGTGAGCCCCCTTTCGTCAAGA CAGCCCAAGGAACCTGCGCG
Downstream 100 bases:
>100_bases TCCCTCGCGTCTTTTCCAGACCACAGCCCTGGGCGCCGGGGCTGCGGTCTGGTTGACCCTGGGCGGGCTTTGCTTAAGTC CCGGCGCCCAGGCGGCGGCT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MTSQMPPFRRPRPVVLCILDGWGHRDDPTDNAIALANTPTWDRLMATCPHSLIATSGADVGLPAGQMGNSEVGHMNIGAG RVVMQDLPRIDAALADGSVAHFPALVRFIDALRASGGTAHLLGLLSPGGVHSHQDHIAKLARVIAAAGVPVKIHAFLDGR DTPPRSALGFLETFAAAAGPEAPIATVSGRYYAMDRDKRFDRVRLAYDVLVSGKGESAADAASAVSQFYDSKDKGDEFVL PTAIAGYDGMKDGDGVFMVNYRSDRAREITQALLDPTFDGFERQPPHFAGALAMTEYSTAHNAFMDVLFGPESLNNILGQ VVSEAGMTQLRIAETEKYAHVTFFFNGGRETSFPGEERILIPSPKVATYDLQPEMSAPELTDRLVEVIDAGRFDVIIVNY ANGDMVGHSGILEAAIKAVEAVDGCLGRVEEAVVRAGGTMLVTADHGNAELMRDPVTGEPHTAHTTGRVDLLLVNGPEGA SLADGRLADLSPTLLALIGLPQPAEMTGKTLVAKAAVAVGASH
Sequences:
>Translated_523_residues MTSQMPPFRRPRPVVLCILDGWGHRDDPTDNAIALANTPTWDRLMATCPHSLIATSGADVGLPAGQMGNSEVGHMNIGAG RVVMQDLPRIDAALADGSVAHFPALVRFIDALRASGGTAHLLGLLSPGGVHSHQDHIAKLARVIAAAGVPVKIHAFLDGR DTPPRSALGFLETFAAAAGPEAPIATVSGRYYAMDRDKRFDRVRLAYDVLVSGKGESAADAASAVSQFYDSKDKGDEFVL PTAIAGYDGMKDGDGVFMVNYRSDRAREITQALLDPTFDGFERQPPHFAGALAMTEYSTAHNAFMDVLFGPESLNNILGQ VVSEAGMTQLRIAETEKYAHVTFFFNGGRETSFPGEERILIPSPKVATYDLQPEMSAPELTDRLVEVIDAGRFDVIIVNY ANGDMVGHSGILEAAIKAVEAVDGCLGRVEEAVVRAGGTMLVTADHGNAELMRDPVTGEPHTAHTTGRVDLLLVNGPEGA SLADGRLADLSPTLLALIGLPQPAEMTGKTLVAKAAVAVGASH >Mature_522_residues TSQMPPFRRPRPVVLCILDGWGHRDDPTDNAIALANTPTWDRLMATCPHSLIATSGADVGLPAGQMGNSEVGHMNIGAGR VVMQDLPRIDAALADGSVAHFPALVRFIDALRASGGTAHLLGLLSPGGVHSHQDHIAKLARVIAAAGVPVKIHAFLDGRD TPPRSALGFLETFAAAAGPEAPIATVSGRYYAMDRDKRFDRVRLAYDVLVSGKGESAADAASAVSQFYDSKDKGDEFVLP TAIAGYDGMKDGDGVFMVNYRSDRAREITQALLDPTFDGFERQPPHFAGALAMTEYSTAHNAFMDVLFGPESLNNILGQV VSEAGMTQLRIAETEKYAHVTFFFNGGRETSFPGEERILIPSPKVATYDLQPEMSAPELTDRLVEVIDAGRFDVIIVNYA NGDMVGHSGILEAAIKAVEAVDGCLGRVEEAVVRAGGTMLVTADHGNAELMRDPVTGEPHTAHTTGRVDLLLVNGPEGAS LADGRLADLSPTLLALIGLPQPAEMTGKTLVAKAAVAVGASH
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=507, Percent_Identity=52.2682445759369, Blast_Score=513, Evalue=1e-146, Organism=Caenorhabditis elegans, GI32564249, Length=513, Percent_Identity=46.588693957115, Blast_Score=418, Evalue=1e-117, Organism=Caenorhabditis elegans, GI17507741, Length=513, Percent_Identity=46.588693957115, Blast_Score=417, Evalue=1e-117,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 55345; Mature: 55214
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQMPPFRRPRPVVLCILDGWGHRDDPTDNAIALANTPTWDRLMATCPHSLIATSGADV CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHCCCCCCC GLPAGQMGNSEVGHMNIGAGRVVMQDLPRIDAALADGSVAHFPALVRFIDALRASGGTAH CCCCCCCCCCCCCEEECCCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEE LLGLLSPGGVHSHQDHIAKLARVIAAAGVPVKIHAFLDGRDTPPRSALGFLETFAAAAGP EEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC EAPIATVSGRYYAMDRDKRFDRVRLAYDVLVSGKGESAADAASAVSQFYDSKDKGDEFVL CCCEEEECCEEEEECCCCCHHHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEE PTAIAGYDGMKDGDGVFMVNYRSDRAREITQALLDPTFDGFERQPPHFAGALAMTEYSTA CHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH HNAFMDVLFGPESLNNILGQVVSEAGMTQLRIAETEKYAHVTFFFNGGRETSFPGEERIL HHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEE IPSPKVATYDLQPEMSAPELTDRLVEVIDAGRFDVIIVNYANGDMVGHSGILEAAIKAVE ECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH AVDGCLGRVEEAVVRAGGTMLVTADHGNAELMRDPVTGEPHTAHTTGRVDLLLVNGPEGA HHHHHHHHHHHHHHHCCCEEEEEECCCCHHEEECCCCCCCCCCCCCCCEEEEEEECCCCC SLADGRLADLSPTLLALIGLPQPAEMTGKTLVAKAAVAVGASH CCCCCCCCCCCHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure TSQMPPFRRPRPVVLCILDGWGHRDDPTDNAIALANTPTWDRLMATCPHSLIATSGADV CCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHCCCCCCC GLPAGQMGNSEVGHMNIGAGRVVMQDLPRIDAALADGSVAHFPALVRFIDALRASGGTAH CCCCCCCCCCCCCEEECCCCHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEE LLGLLSPGGVHSHQDHIAKLARVIAAAGVPVKIHAFLDGRDTPPRSALGFLETFAAAAGP EEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC EAPIATVSGRYYAMDRDKRFDRVRLAYDVLVSGKGESAADAASAVSQFYDSKDKGDEFVL CCCEEEECCEEEEECCCCCHHHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEE PTAIAGYDGMKDGDGVFMVNYRSDRAREITQALLDPTFDGFERQPPHFAGALAMTEYSTA CHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH HNAFMDVLFGPESLNNILGQVVSEAGMTQLRIAETEKYAHVTFFFNGGRETSFPGEERIL HHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEE IPSPKVATYDLQPEMSAPELTDRLVEVIDAGRFDVIIVNYANGDMVGHSGILEAAIKAVE ECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH AVDGCLGRVEEAVVRAGGTMLVTADHGNAELMRDPVTGEPHTAHTTGRVDLLLVNGPEGA HHHHHHHHHHHHHHHCCCEEEEEECCCCHHEEECCCCCCCCCCCCCCCEEEEEEECCCCC SLADGRLADLSPTLLALIGLPQPAEMTGKTLVAKAAVAVGASH CCCCCCCCCCCHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA