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The map label for this gene is tsr [C]

Identifier: 83592533

GI number: 83592533

Start: 1413730

End: 1415796

Strand: Reverse

Name: tsr [C]

Synonym: Rru_A1197

Alternate gene names: 83592533

Gene position: 1415796-1413730 (Counterclockwise)

Preceding gene: 83592534

Following gene: 83592530

Centisome position: 32.53

GC content: 65.8

Gene sequence:

>2067_bases
ATGTCGATAAAGCGTTTCATGATGATGTGCTTTTTTTCCATATCGATCATTTTGATCGTCATGGCCTTTCTTCTTTTCCG
CACGAGTTGGCAGGAAAGCCACAGGGCCAAAGACGCCGGTGACCTTGTGGAGTTGTTGGGGGCCGCCACCTTGATTTCCG
AGACCCTGGCCCCCGAACGCGGCGCCAGCAGCGTTTCCCTTGATGGCGGTCCCGAAGCGCGAAAAACCCTGCTCACCACC
CGCGAGCGCCTGAACCAGACTTTCGACCGGGTCGAAAGCACCCTGCGGGCCAGTCCTTCGGACGACGGCCGGCGCGCCCT
GCAGACCATCACCAAGGTCCGTGCGGATTTGGCGGAATGGCGCCAGAAGGTCGACGCGACCACCGACGGCGATCCGCAGC
GCATCGTCGCCTTTCGCAAGGAGCTCATCGCCGGCATGCTCGGCTTGTTGACCGAGGTTTCAAAGCTCACCTCCGCCCTG
GAGCACCAGTTGGGGCTGACGGATGCCGAAGTGACCGTCCCGGCCGCGCTGGCTTTGATCACCGGGCAGCTTCGCGACAA
CGCCGGCCGTCAATCGACCCTGCATCTCGACGCCGTGGTGGGCAAAAAGCCGTTCACCCCGACGCAATTGGCCCAGATGA
GCCTTCTTGATGGCCGCATTCAGCTGCTGTGGGAGCAATTGACCCGCGCCGGCACCGCCGACGACAGCTCGCCGCGTCTG
CGCGCCGCCGTTGAAGCGGTCGATGCCCAGTTCGTCAAACCCTTCGCCGCCGCGCGCGCCCGGGTGACCGCCCATGCCGG
CGACGGCGCCTATGATCTCGAAGGGGCTGAATGGCGCAAAATGACCGCCCCGATGCTCCAGTCGATCATGCTCGTCCGCG
ACGCCGCCATCGATGACGCCCGCCAGTTGGTTGACGAGAAGATCGCCAAGGCCTCCTTTGCCTTATGGGAGCTTTCGGGA
TTGCTCGGCCTCGCCGTCGGCATCGTCGCCGTTATCATCATCGTGACCGGTCGCCGGGTGACGGCGCCCCTTGATCATCT
GACCGCGACGATCGTCGATTTCGCCCAAGGGGCGCGTGAGTTCGCCGTGCCCCATACCGACCGCCGCGACGAGATCGGCC
GCATGGCCAAAGCCCTCGAGGTGCTGCGCGGCAACGCCCTGGCCGCCGATACCCAGGCCAAACACGCCGAAGACGAGCGC
TTGGCCCGCGATCAACGCCGCCAGAAAACCGAAGTCGTCACTTCGGAGTTCGTCGGCTCGATCGATGGCGTCGTCGCCGG
CGTCACCCGCGCCGCCGAGCAGCTCCGCGCCGAAACCAAGTCCTTGTTGCAGACCTCCGAACTCTCCTCGCGCCAGTCCG
AGGTCGTCGCCACCGCCTCGGAAGACGCCAGCGCCAATGTTCAGACCGTGGCGGCGGCGGCCGAGGAATTGTCCAACAGC
ATCCAGGAGATCTCGCGCCGCGTCGCCGAAACCGCCGCCACCACCGATGGCGCCGTCCAGCAGGCCGAAAGCACCAACGC
CATGGTCCGCAGCCTGACCGAAGCGGTGCGCAAGATCGGCGACGTCGTCAAGCTGATTTCCGATATCGCCAGCCAGACCA
ATCTGCTGGCGCTCAACGCCACCATCGAGGCGGCGCGGGCGGGAGACGCCGGCAAGGGCTTCGCCGTCGTCGCCGGCGAG
GTCAAGACCCTGGCCAACCAGACCGCCAAGGCGACCGAGGACATCCAGTCCCAGGTCGCGGCCATCCAGGTGGAAACCGA
GCGCGCCACCACGGCGATCGGCGCCATCACGGCGACCATCGCCGCCGTCAATCAGCACACCATCGGCATCGCCGCCGCCG
TCGAGCAGCAAGGCGCCGCCACCACCGAGATCGCCCGCAACGTTCAACAGGCGGCCAACGGCACGGCCGAGGTCTCGTCG
TCGATCGGCAAGGTTCTGGAAGCCGCCCATCAGACCGGCGCGGCCGCCACCAAGCTTTCAAAGCTGGCCGATTCCCTGGC
GGGGGATTCCACCTTGCTCGATCAGACGGTCGGCGGCTTCGTCACGCAGATCCGCGTGGCGGGGTAA

Upstream 100 bases:

>100_bases
TCGACAAAAGCTAAACTTCCTTATCTCGGACTCTCCCTGCGACGGATCGCGCCGAAGGAAGGGCTCCCCCGCCCGTAGAG
CGGATAGATCGGGGAATGTC

Downstream 100 bases:

>100_bases
GCGCGAAAAAACGCCCCCTTCCCGATTGAAACGGCGGAAAGGGGGCGTTTTGGGACCCGGTCGGCGGCCCTACTTCAGGT
AATCGCGGGCCAGAACCTCG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 688; Mature: 687

Protein sequence:

>688_residues
MSIKRFMMMCFFSISIILIVMAFLLFRTSWQESHRAKDAGDLVELLGAATLISETLAPERGASSVSLDGGPEARKTLLTT
RERLNQTFDRVESTLRASPSDDGRRALQTITKVRADLAEWRQKVDATTDGDPQRIVAFRKELIAGMLGLLTEVSKLTSAL
EHQLGLTDAEVTVPAALALITGQLRDNAGRQSTLHLDAVVGKKPFTPTQLAQMSLLDGRIQLLWEQLTRAGTADDSSPRL
RAAVEAVDAQFVKPFAAARARVTAHAGDGAYDLEGAEWRKMTAPMLQSIMLVRDAAIDDARQLVDEKIAKASFALWELSG
LLGLAVGIVAVIIIVTGRRVTAPLDHLTATIVDFAQGAREFAVPHTDRRDEIGRMAKALEVLRGNALAADTQAKHAEDER
LARDQRRQKTEVVTSEFVGSIDGVVAGVTRAAEQLRAETKSLLQTSELSSRQSEVVATASEDASANVQTVAAAAEELSNS
IQEISRRVAETAATTDGAVQQAESTNAMVRSLTEAVRKIGDVVKLISDIASQTNLLALNATIEAARAGDAGKGFAVVAGE
VKTLANQTAKATEDIQSQVAAIQVETERATTAIGAITATIAAVNQHTIGIAAAVEQQGAATTEIARNVQQAANGTAEVSS
SIGKVLEAAHQTGAAATKLSKLADSLAGDSTLLDQTVGGFVTQIRVAG

Sequences:

>Translated_688_residues
MSIKRFMMMCFFSISIILIVMAFLLFRTSWQESHRAKDAGDLVELLGAATLISETLAPERGASSVSLDGGPEARKTLLTT
RERLNQTFDRVESTLRASPSDDGRRALQTITKVRADLAEWRQKVDATTDGDPQRIVAFRKELIAGMLGLLTEVSKLTSAL
EHQLGLTDAEVTVPAALALITGQLRDNAGRQSTLHLDAVVGKKPFTPTQLAQMSLLDGRIQLLWEQLTRAGTADDSSPRL
RAAVEAVDAQFVKPFAAARARVTAHAGDGAYDLEGAEWRKMTAPMLQSIMLVRDAAIDDARQLVDEKIAKASFALWELSG
LLGLAVGIVAVIIIVTGRRVTAPLDHLTATIVDFAQGAREFAVPHTDRRDEIGRMAKALEVLRGNALAADTQAKHAEDER
LARDQRRQKTEVVTSEFVGSIDGVVAGVTRAAEQLRAETKSLLQTSELSSRQSEVVATASEDASANVQTVAAAAEELSNS
IQEISRRVAETAATTDGAVQQAESTNAMVRSLTEAVRKIGDVVKLISDIASQTNLLALNATIEAARAGDAGKGFAVVAGE
VKTLANQTAKATEDIQSQVAAIQVETERATTAIGAITATIAAVNQHTIGIAAAVEQQGAATTEIARNVQQAANGTAEVSS
SIGKVLEAAHQTGAAATKLSKLADSLAGDSTLLDQTVGGFVTQIRVAG
>Mature_687_residues
SIKRFMMMCFFSISIILIVMAFLLFRTSWQESHRAKDAGDLVELLGAATLISETLAPERGASSVSLDGGPEARKTLLTTR
ERLNQTFDRVESTLRASPSDDGRRALQTITKVRADLAEWRQKVDATTDGDPQRIVAFRKELIAGMLGLLTEVSKLTSALE
HQLGLTDAEVTVPAALALITGQLRDNAGRQSTLHLDAVVGKKPFTPTQLAQMSLLDGRIQLLWEQLTRAGTADDSSPRLR
AAVEAVDAQFVKPFAAARARVTAHAGDGAYDLEGAEWRKMTAPMLQSIMLVRDAAIDDARQLVDEKIAKASFALWELSGL
LGLAVGIVAVIIIVTGRRVTAPLDHLTATIVDFAQGAREFAVPHTDRRDEIGRMAKALEVLRGNALAADTQAKHAEDERL
ARDQRRQKTEVVTSEFVGSIDGVVAGVTRAAEQLRAETKSLLQTSELSSRQSEVVATASEDASANVQTVAAAAEELSNSI
QEISRRVAETAATTDGAVQQAESTNAMVRSLTEAVRKIGDVVKLISDIASQTNLLALNATIEAARAGDAGKGFAVVAGEV
KTLANQTAKATEDIQSQVAAIQVETERATTAIGAITATIAAVNQHTIGIAAAVEQQGAATTEIARNVQQAANGTAEVSSS
IGKVLEAAHQTGAAATKLSKLADSLAGDSTLLDQTVGGFVTQIRVAG

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=277, Percent_Identity=28.158844765343, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI1788194, Length=248, Percent_Identity=32.258064516129, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1789453, Length=170, Percent_Identity=34.1176470588235, Blast_Score=87, Evalue=5e-18,
Organism=Escherichia coli, GI1787690, Length=321, Percent_Identity=27.1028037383178, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788195, Length=136, Percent_Identity=37.5, Blast_Score=84, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 72930; Mature: 72799

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKRFMMMCFFSISIILIVMAFLLFRTSWQESHRAKDAGDLVELLGAATLISETLAPER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
GASSVSLDGGPEARKTLLTTRERLNQTFDRVESTLRASPSDDGRRALQTITKVRADLAEW
CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RQKVDATTDGDPQRIVAFRKELIAGMLGLLTEVSKLTSALEHQLGLTDAEVTVPAALALI
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TGQLRDNAGRQSTLHLDAVVGKKPFTPTQLAQMSLLDGRIQLLWEQLTRAGTADDSSPRL
HHHHHCCCCCCCEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
RAAVEAVDAQFVKPFAAARARVTAHAGDGAYDLEGAEWRKMTAPMLQSIMLVRDAAIDDA
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RQLVDEKIAKASFALWELSGLLGLAVGIVAVIIIVTGRRVTAPLDHLTATIVDFAQGARE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FAVPHTDRRDEIGRMAKALEVLRGNALAADTQAKHAEDERLARDQRRQKTEVVTSEFVGS
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IDGVVAGVTRAAEQLRAETKSLLQTSELSSRQSEVVATASEDASANVQTVAAAAEELSNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH
IQEISRRVAETAATTDGAVQQAESTNAMVRSLTEAVRKIGDVVKLISDIASQTNLLALNA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
TIEAARAGDAGKGFAVVAGEVKTLANQTAKATEDIQSQVAAIQVETERATTAIGAITATI
HHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHH
AAVNQHTIGIAAAVEQQGAATTEIARNVQQAANGTAEVSSSIGKVLEAAHQTGAAATKLS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLADSLAGDSTLLDQTVGGFVTQIRVAG
HHHHHHCCCHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
SIKRFMMMCFFSISIILIVMAFLLFRTSWQESHRAKDAGDLVELLGAATLISETLAPER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
GASSVSLDGGPEARKTLLTTRERLNQTFDRVESTLRASPSDDGRRALQTITKVRADLAEW
CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RQKVDATTDGDPQRIVAFRKELIAGMLGLLTEVSKLTSALEHQLGLTDAEVTVPAALALI
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TGQLRDNAGRQSTLHLDAVVGKKPFTPTQLAQMSLLDGRIQLLWEQLTRAGTADDSSPRL
HHHHHCCCCCCCEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
RAAVEAVDAQFVKPFAAARARVTAHAGDGAYDLEGAEWRKMTAPMLQSIMLVRDAAIDDA
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RQLVDEKIAKASFALWELSGLLGLAVGIVAVIIIVTGRRVTAPLDHLTATIVDFAQGARE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FAVPHTDRRDEIGRMAKALEVLRGNALAADTQAKHAEDERLARDQRRQKTEVVTSEFVGS
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IDGVVAGVTRAAEQLRAETKSLLQTSELSSRQSEVVATASEDASANVQTVAAAAEELSNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH
IQEISRRVAETAATTDGAVQQAESTNAMVRSLTEAVRKIGDVVKLISDIASQTNLLALNA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
TIEAARAGDAGKGFAVVAGEVKTLANQTAKATEDIQSQVAAIQVETERATTAIGAITATI
HHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHH
AAVNQHTIGIAAAVEQQGAATTEIARNVQQAANGTAEVSSSIGKVLEAAHQTGAAATKLS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KLADSLAGDSTLLDQTVGGFVTQIRVAG
HHHHHHCCCHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]