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The map label for this gene is ycgF [H]

Identifier: 83592534

GI number: 83592534

Start: 1415969

End: 1416574

Strand: Reverse

Name: ycgF [H]

Synonym: Rru_A1198

Alternate gene names: 83592534

Gene position: 1416574-1415969 (Counterclockwise)

Preceding gene: 83592535

Following gene: 83592533

Centisome position: 32.54

GC content: 65.18

Gene sequence:

>606_bases
TTGATCAAGGGCATGGCCGTCGGCCTTGCCATCGCCGCCCCGGTCGGACCGGTGGGCATCCTGTGCATCCGCAAGGCCCT
GGCCGATGGGCGCTTCGCCGCCTTCGTCGCCGGCATGGGCGCCGCGGTGGCCGATACCTTTTATGGGGCGGTCGCCGGCC
TCGGCCTGGGGCTTATCAGTGATTTCCTCACCCAGAACAAGAACGCGCTGTCGGTGGTCGGCGGCCTCTTCCTGCTGGTC
CTGGGCGTGCGCACCCTGCGCCGCCCACCGCTGATCCTGCCCGCGGAAAACTCGCGCATCGGCCTGCTCAAGGACTTCTT
GTCAACCTTCACCATCACCATGACCAATCCGGCGACGATCCTGGCCTTCATGGCGGTTTTCGCCTCGTTCAGTCTGGCCG
GATTCGACCGGGACAGGGTCGACGCCTCGCTGGTGATTCTCGGAGTCTTTCTTGGCTCGTCGCTGTGGTGGGCGACCCTG
GCGGCGGCGGCCGGCGCCGTACGCAGCCATTTCACCCCGCTCTGGCTCGATTGGCTCAACAAGATGTCGGGTGGGCTTTT
GCTGGTTTTCGGTATCGCGGTACTCGCCCTGCTTGTCTTTGGATAG

Upstream 100 bases:

>100_bases
CCCCGACCGGGCCGAAGGCTATCAGAAGGCCGCCGGTGGCGCAGAGCGTCCGGAACCGCGAGGAAGGATCGATAAAATCG
GCAGCGAGATACTGATCCCT

Downstream 100 bases:

>100_bases
GTAGCGATAGTCTCAACGTGTTATTACCCTAATCCTATAGTCCTATAGACGTATATTTTATTTTGCTGATCATCGACAAA
AGCTAAACTTCCTTATCTCG

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MIKGMAVGLAIAAPVGPVGILCIRKALADGRFAAFVAGMGAAVADTFYGAVAGLGLGLISDFLTQNKNALSVVGGLFLLV
LGVRTLRRPPLILPAENSRIGLLKDFLSTFTITMTNPATILAFMAVFASFSLAGFDRDRVDASLVILGVFLGSSLWWATL
AAAAGAVRSHFTPLWLDWLNKMSGGLLLVFGIAVLALLVFG

Sequences:

>Translated_201_residues
MIKGMAVGLAIAAPVGPVGILCIRKALADGRFAAFVAGMGAAVADTFYGAVAGLGLGLISDFLTQNKNALSVVGGLFLLV
LGVRTLRRPPLILPAENSRIGLLKDFLSTFTITMTNPATILAFMAVFASFSLAGFDRDRVDASLVILGVFLGSSLWWATL
AAAAGAVRSHFTPLWLDWLNKMSGGLLLVFGIAVLALLVFG
>Mature_201_residues
MIKGMAVGLAIAAPVGPVGILCIRKALADGRFAAFVAGMGAAVADTFYGAVAGLGLGLISDFLTQNKNALSVVGGLFLLV
LGVRTLRRPPLILPAENSRIGLLKDFLSTFTITMTNPATILAFMAVFASFSLAGFDRDRVDASLVILGVFLGSSLWWATL
AAAAGAVRSHFTPLWLDWLNKMSGGLLLVFGIAVLALLVFG

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 20926; Mature: 20926

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKGMAVGLAIAAPVGPVGILCIRKALADGRFAAFVAGMGAAVADTFYGAVAGLGLGLIS
CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFLTQNKNALSVVGGLFLLVLGVRTLRRPPLILPAENSRIGLLKDFLSTFTITMTNPATI
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEEEECCHHHH
LAFMAVFASFSLAGFDRDRVDASLVILGVFLGSSLWWATLAAAAGAVRSHFTPLWLDWLN
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
KMSGGLLLVFGIAVLALLVFG
HHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKGMAVGLAIAAPVGPVGILCIRKALADGRFAAFVAGMGAAVADTFYGAVAGLGLGLIS
CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFLTQNKNALSVVGGLFLLVLGVRTLRRPPLILPAENSRIGLLKDFLSTFTITMTNPATI
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEEEECCHHHH
LAFMAVFASFSLAGFDRDRVDASLVILGVFLGSSLWWATLAAAAGAVRSHFTPLWLDWLN
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
KMSGGLLLVFGIAVLALLVFG
HHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]