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The map label for this gene is 83592530

Identifier: 83592530

GI number: 83592530

Start: 1410707

End: 1411138

Strand: Reverse

Name: 83592530

Synonym: Rru_A1194

Alternate gene names: NA

Gene position: 1411138-1410707 (Counterclockwise)

Preceding gene: 83592533

Following gene: 83592529

Centisome position: 32.42

GC content: 70.14

Gene sequence:

>432_bases
ATGCCCCGTCCCCGAAAAACCCGGACGGTCCGCACCGATCTTGCGGTCCACTTCTACAAGCCCCAGGGCATTCCGCTGCG
GGATCTGCAAAGCGTCACCTTGTCCCTCGATGGACTGGAGGCCCTGCGCCTTGCCGATGTCGAGGGACTGGAACACGCCG
CCGGCGCGGACTCGATGGGCATCTCGCGACCGACGTTCTCGCGGCTGCTGACCGAGGCGCGGACCACCGTGGCCACCGCC
CTGGTCGAAGGCTGGGCCATTCACATCGACGGCGGCCCGGTCGCCCAGGGTCCGGCATTGGACGGTTCGGCCTGCCCCAA
CCGCCGCCAGCGCCGGGGGCCCTGCGCCCGTCGCGGCGCCGCCGGAGCCTTGGCCCGCCAAACCGGCGACGAGCCGCCCT
CGTCGCCGACCGATAACGAAAAGGATGACTAA

Upstream 100 bases:

>100_bases
TTGCGCCCGCCGCGAGGCATTATGAGCTTGCGTTCATAACATCCTTGCGTTTGGTCGGCGCCCACCTTAGTTTTGAGCAT
AGGCTCAGAACGGAGAAAGC

Downstream 100 bases:

>100_bases
GATGACGGACTGCGTGGCGTTTCCCTGCCTTTTGCCCGGGGGATTAAAGGCACCGCTTTTTGGCCACTTCGGCGAAAGCG
AGGCCTTTACCGTGGTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPRPRKTRTVRTDLAVHFYKPQGIPLRDLQSVTLSLDGLEALRLADVEGLEHAAGADSMGISRPTFSRLLTEARTTVATA
LVEGWAIHIDGGPVAQGPALDGSACPNRRQRRGPCARRGAAGALARQTGDEPPSSPTDNEKDD

Sequences:

>Translated_143_residues
MPRPRKTRTVRTDLAVHFYKPQGIPLRDLQSVTLSLDGLEALRLADVEGLEHAAGADSMGISRPTFSRLLTEARTTVATA
LVEGWAIHIDGGPVAQGPALDGSACPNRRQRRGPCARRGAAGALARQTGDEPPSSPTDNEKDD
>Mature_142_residues
PRPRKTRTVRTDLAVHFYKPQGIPLRDLQSVTLSLDGLEALRLADVEGLEHAAGADSMGISRPTFSRLLTEARTTVATAL
VEGWAIHIDGGPVAQGPALDGSACPNRRQRRGPCARRGAAGALARQTGDEPPSSPTDNEKDD

Specific function: Unknown

COG id: COG1342

COG function: function code R; Predicted DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0251 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1194_RHORT (Q2RV50)

Other databases:

- EMBL:   CP000230
- RefSeq:   YP_426282.1
- STRING:   Q2RV50
- GeneID:   3834704
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A1194
- NMPDR:   fig|1085.1.peg.3172
- eggNOG:   COG1342
- HOGENOM:   HBG513201
- OMA:   CKISETV
- ProtClustDB:   CLSK2773199
- BioCyc:   RRUB269796:RRU_A1194-MONOMER
- HAMAP:   MF_00674
- InterPro:   IPR002852

Pfam domain/function: PF02001 DUF134

EC number: NA

Molecular weight: Translated: 15247; Mature: 15116

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPRKTRTVRTDLAVHFYKPQGIPLRDLQSVTLSLDGLEALRLADVEGLEHAAGADSMG
CCCCCCCCEEEECEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCCCCC
ISRPTFSRLLTEARTTVATALVEGWAIHIDGGPVAQGPALDGSACPNRRQRRGPCARRGA
CCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCHHCCC
AGALARQTGDEPPSSPTDNEKDD
HHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRPRKTRTVRTDLAVHFYKPQGIPLRDLQSVTLSLDGLEALRLADVEGLEHAAGADSMG
CCCCCCCEEEECEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCCCCC
ISRPTFSRLLTEARTTVATALVEGWAIHIDGGPVAQGPALDGSACPNRRQRRGPCARRGA
CCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCHHCCC
AGALARQTGDEPPSSPTDNEKDD
HHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA