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The map label for this gene is potA [C]

Identifier: 83592402

GI number: 83592402

Start: 1256531

End: 1257316

Strand: Direct

Name: potA [C]

Synonym: Rru_A1066

Alternate gene names: 83592402

Gene position: 1256531-1257316 (Clockwise)

Preceding gene: 83592401

Following gene: 83592403

Centisome position: 28.87

GC content: 66.28

Gene sequence:

>786_bases
ATGATCGAGCGGATAACCATCCTCGGCGGGCAGGGGCGGGACGGGCGGGCCGACGCCGTGGCGCGGCTGGATCTGGCGAT
GGGCGATGTGGTCAGCATCGTCGGTCCCACCGGATCGGGCAAAACCACCCTGATCAACGATATCGAACTGTTCGCCAATG
CCGATACGCCGACCGGGCGGCGGGTGCTGATCAATGGCGAGCGGGCGCCGACGGCCTATCGCGATGATCCGGCGCGCAAT
CCCATCGCCCTGATCACCCAGCACACCACCTTTTTGTCGGATCTGCCGGTCGATGTCTTCTTGCAGACCCACGCCCGCAT
CCGCAAGGCCGGCGGCGGCCGGGTCGATGATCTGGTGGCCGCCACCTTGGACTTCGCCAACCAGTTGACCGGCGAGCCGG
TGGCGCCGGGCCTGCGCATGACCGAACTATCGGGCGGGCAGACCCGGGCCCTGCTGATCGCCGATGCGACGCTGATCTGC
GATACGCCGATCGTTCTGCTTGACGAGGTCGAGAACGCCGGCATTCACCGCAGTCGGGCGCTGGAACTGCTGCGCCAACA
CCGCAAGATCTTCCTGTTCGTCACCCATGATCCGCGCATCGCCCTGTTGTCGGATTACCGCATCGTCATGCGCGGCGGTC
GCATCGAAAGCGTGCTGGTCACCGACGATCACGAAAAGGCCCTGGCCCCCCAGGTCGCCCGCCTTGATGACATGCTGTCG
CGGTTGCGCGACAGCATCCGCGGCGGCGAGCGGGTGTCCGTCACCGATCTGGGAGACGCCGCATGA

Upstream 100 bases:

>100_bases
ATTCGTAAAAACTACTTTCTCTACCTATTAGGTCGTGTTAAAGACGGAAAACCGGATGGCGAGTAAGGCCAAGCCGATTT
CCAGGGAGAGAAAGCGACCG

Downstream 100 bases:

>100_bases
AACTGGTCATCTGCGCCGGGCCGGCGACCACCGGCAAGACGGCGGTGCTCCGTCATGCCATCGGCAAGCTGATCGGTCGG
GGGTTCAAGCCGGCCTTTCT

Product: ABC transporter protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MIERITILGGQGRDGRADAVARLDLAMGDVVSIVGPTGSGKTTLINDIELFANADTPTGRRVLINGERAPTAYRDDPARN
PIALITQHTTFLSDLPVDVFLQTHARIRKAGGGRVDDLVAATLDFANQLTGEPVAPGLRMTELSGGQTRALLIADATLIC
DTPIVLLDEVENAGIHRSRALELLRQHRKIFLFVTHDPRIALLSDYRIVMRGGRIESVLVTDDHEKALAPQVARLDDMLS
RLRDSIRGGERVSVTDLGDAA

Sequences:

>Translated_261_residues
MIERITILGGQGRDGRADAVARLDLAMGDVVSIVGPTGSGKTTLINDIELFANADTPTGRRVLINGERAPTAYRDDPARN
PIALITQHTTFLSDLPVDVFLQTHARIRKAGGGRVDDLVAATLDFANQLTGEPVAPGLRMTELSGGQTRALLIADATLIC
DTPIVLLDEVENAGIHRSRALELLRQHRKIFLFVTHDPRIALLSDYRIVMRGGRIESVLVTDDHEKALAPQVARLDDMLS
RLRDSIRGGERVSVTDLGDAA
>Mature_261_residues
MIERITILGGQGRDGRADAVARLDLAMGDVVSIVGPTGSGKTTLINDIELFANADTPTGRRVLINGERAPTAYRDDPARN
PIALITQHTTFLSDLPVDVFLQTHARIRKAGGGRVDDLVAATLDFANQLTGEPVAPGLRMTELSGGQTRALLIADATLIC
DTPIVLLDEVENAGIHRSRALELLRQHRKIFLFVTHDPRIALLSDYRIVMRGGRIESVLVTDDHEKALAPQVARLDDMLS
RLRDSIRGGERVSVTDLGDAA

Specific function: Part Of The Binding-Protein-Dependent Transport System For Spermidine/Putrescine. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG1136

COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28266; Mature: 28266

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERITILGGQGRDGRADAVARLDLAMGDVVSIVGPTGSGKTTLINDIELFANADTPTGR
CCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEEECCCCCCCC
RVLINGERAPTAYRDDPARNPIALITQHTTFLSDLPVDVFLQTHARIRKAGGGRVDDLVA
EEEEECCCCCCCCCCCCCCCCEEEEEECHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHH
ATLDFANQLTGEPVAPGLRMTELSGGQTRALLIADATLICDTPIVLLDEVENAGIHRSRA
HHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCEEEECCCEEEEECCCCCCCCHHHH
LELLRQHRKIFLFVTHDPRIALLSDYRIVMRGGRIESVLVTDDHEKALAPQVARLDDMLS
HHHHHCCCEEEEEEECCCCEEEEECEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHH
RLRDSIRGGERVSVTDLGDAA
HHHHHHCCCCEEEEECCCCCC
>Mature Secondary Structure
MIERITILGGQGRDGRADAVARLDLAMGDVVSIVGPTGSGKTTLINDIELFANADTPTGR
CCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEEEEECCCCCCCC
RVLINGERAPTAYRDDPARNPIALITQHTTFLSDLPVDVFLQTHARIRKAGGGRVDDLVA
EEEEECCCCCCCCCCCCCCCCEEEEEECHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHH
ATLDFANQLTGEPVAPGLRMTELSGGQTRALLIADATLICDTPIVLLDEVENAGIHRSRA
HHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCEEEECCCEEEEECCCCCCCCHHHH
LELLRQHRKIFLFVTHDPRIALLSDYRIVMRGGRIESVLVTDDHEKALAPQVARLDDMLS
HHHHHCCCEEEEEEECCCCEEEEECEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHH
RLRDSIRGGERVSVTDLGDAA
HHHHHHCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]