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The map label for this gene is 83592403

Identifier: 83592403

GI number: 83592403

Start: 1257313

End: 1258014

Strand: Direct

Name: 83592403

Synonym: Rru_A1067

Alternate gene names: NA

Gene position: 1257313-1258014 (Clockwise)

Preceding gene: 83592402

Following gene: 83592404

Centisome position: 28.88

GC content: 64.81

Gene sequence:

>702_bases
ATGAAACTGGTCATCTGCGCCGGGCCGGCGACCACCGGCAAGACGGCGGTGCTCCGTCATGCCATCGGCAAGCTGATCGG
TCGGGGGTTCAAGCCGGCCTTTCTCAAGATCGATGTGCAATACGCCGAGGAGGACGAACAGTTCGCCCGCGAATTCGCCA
TCCCCACCCGCAAGACCTATTCGGGCGATCTGTGCCCCGACCATTGCACGGTGATGGTGCTAGGCGAGGCCCTGGAGTGG
GCGGGGCGTCAGGGAGCCGACGTTCTGCTGGTCGAGACCGCCGGGTTATGCCTGCGCTGCTCGCCCTATGTCGATGGCGG
CCTTGGCGTCATCGTGCTCGAAGCGACCAGCGGCATGAACCTGCCGCTCAAGGTCGGGCCGATGCTGTCGCTGGCCGATG
TCGCCGTCGTCACCAAGATCGACCGCATTTCCCAGGCCGAACGCGAGGTGTTCCGCGCCCGCATTCAGGATGTGGCGCCG
GGGGTGCGCATCCGCGAGGCCAATGCCCTTCATGGCATCGGCATCGATCCTTTGGTCGATCAGATCCAGGCGACGCCCGA
TGTCGACGCCACCTTGTCCCTGCGCGGCAATCCGCCCGTGGGCACCTGCACGATCTGCGTCGGCAAGAAGGAGATCGGCT
GGAAGGCCCATTTCGGCGTGGTGCGCTCGCTGGAGAACCAGACTTTCTATCGGGGGGAATGA

Upstream 100 bases:

>100_bases
TGGCCCCCCAGGTCGCCCGCCTTGATGACATGCTGTCGCGGTTGCGCGACAGCATCCGCGGCGGCGAGCGGGTGTCCGTC
ACCGATCTGGGAGACGCCGC

Downstream 100 bases:

>100_bases
CATGTCCGTCGTCTATCTCGATCATAGTGCCACCACGCCGGCCGATCCCCGGGTGGTCGAGGCGATGATCCCCTTTCTCG
GCGGGATCTATGGCAACCCC

Product: cobalamin synthesis protein/P47K

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKLVICAGPATTGKTAVLRHAIGKLIGRGFKPAFLKIDVQYAEEDEQFAREFAIPTRKTYSGDLCPDHCTVMVLGEALEW
AGRQGADVLLVETAGLCLRCSPYVDGGLGVIVLEATSGMNLPLKVGPMLSLADVAVVTKIDRISQAEREVFRARIQDVAP
GVRIREANALHGIGIDPLVDQIQATPDVDATLSLRGNPPVGTCTICVGKKEIGWKAHFGVVRSLENQTFYRGE

Sequences:

>Translated_233_residues
MKLVICAGPATTGKTAVLRHAIGKLIGRGFKPAFLKIDVQYAEEDEQFAREFAIPTRKTYSGDLCPDHCTVMVLGEALEW
AGRQGADVLLVETAGLCLRCSPYVDGGLGVIVLEATSGMNLPLKVGPMLSLADVAVVTKIDRISQAEREVFRARIQDVAP
GVRIREANALHGIGIDPLVDQIQATPDVDATLSLRGNPPVGTCTICVGKKEIGWKAHFGVVRSLENQTFYRGE
>Mature_233_residues
MKLVICAGPATTGKTAVLRHAIGKLIGRGFKPAFLKIDVQYAEEDEQFAREFAIPTRKTYSGDLCPDHCTVMVLGEALEW
AGRQGADVLLVETAGLCLRCSPYVDGGLGVIVLEATSGMNLPLKVGPMLSLADVAVVTKIDRISQAEREVFRARIQDVAP
GVRIREANALHGIGIDPLVDQIQATPDVDATLSLRGNPPVGTCTICVGKKEIGWKAHFGVVRSLENQTFYRGE

Specific function: Unknown

COG id: COG0378

COG function: function code OK; Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR012202 [H]

Pfam domain/function: PF02492 cobW [H]

EC number: NA

Molecular weight: Translated: 25068; Mature: 25068

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVICAGPATTGKTAVLRHAIGKLIGRGFKPAFLKIDVQYAEEDEQFAREFAIPTRKTY
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCC
SGDLCPDHCTVMVLGEALEWAGRQGADVLLVETAGLCLRCSPYVDGGLGVIVLEATSGMN
CCCCCCCCEEEEEEEHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCEEEEEEEECCCCC
LPLKVGPMLSLADVAVVTKIDRISQAEREVFRARIQDVAPGVRIREANALHGIGIDPLVD
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHH
QIQATPDVDATLSLRGNPPVGTCTICVGKKEIGWKAHFGVVRSLENQTFYRGE
HHHCCCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MKLVICAGPATTGKTAVLRHAIGKLIGRGFKPAFLKIDVQYAEEDEQFAREFAIPTRKTY
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCC
SGDLCPDHCTVMVLGEALEWAGRQGADVLLVETAGLCLRCSPYVDGGLGVIVLEATSGMN
CCCCCCCCEEEEEEEHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCEEEEEEEECCCCC
LPLKVGPMLSLADVAVVTKIDRISQAEREVFRARIQDVAPGVRIREANALHGIGIDPLVD
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHH
QIQATPDVDATLSLRGNPPVGTCTICVGKKEIGWKAHFGVVRSLENQTFYRGE
HHHCCCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]